Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01067

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 7
1,175,826	-		MIT1002_01064	0.82	-0.5
1,175,873	+		MIT1002_01064	0.86	-0.8
1,176,107	-				+0.3
1,176,144	+				-0.5
1,176,171	-				-0.0
1,176,212	+				+0.5
1,176,219	+				-3.2
1,176,300	-		MIT1002_01065	0.25	+1.2
1,176,416	+		MIT1002_01065	0.78	-0.9
1,176,416	+		MIT1002_01065	0.78	+1.0
1,176,424	-		MIT1002_01065	0.82	-0.1
1,176,475	+				+0.7
1,176,631	+		MIT1002_01066	0.17	+0.1
1,176,714	+		MIT1002_01066	0.74	-3.9
1,176,736	-				-1.3
1,176,828	-		MIT1002_01067	0.12	+0.9
1,176,828	-		MIT1002_01067	0.12	+0.1
1,176,842	+		MIT1002_01067	0.14	+0.7
1,176,850	-		MIT1002_01067	0.16	+1.0
1,176,850	-		MIT1002_01067	0.16	+0.7
1,176,892	-		MIT1002_01067	0.24	+1.6
1,176,932	+		MIT1002_01067	0.31	-0.5
1,176,940	-		MIT1002_01067	0.33	-1.0
1,176,940	-		MIT1002_01067	0.33	-0.6
1,176,942	+		MIT1002_01067	0.33	+0.3
1,177,008	-		MIT1002_01067	0.46	-1.1
1,177,056	-		MIT1002_01067	0.55	-0.8
1,177,102	+		MIT1002_01067	0.63	+2.1
1,177,142	-		MIT1002_01067	0.71	+0.5
1,177,165	+		MIT1002_01067	0.75	-1.2
1,177,173	-		MIT1002_01067	0.77	+1.4
1,177,189	+		MIT1002_01067	0.80	-1.7
1,177,197	-		MIT1002_01067	0.81	+0.5
1,177,216	+		MIT1002_01067	0.85	-0.8
1,177,216	+		MIT1002_01067	0.85	+1.1
1,177,216	+		MIT1002_01067	0.85	-2.2
1,177,224	-		MIT1002_01067	0.86	+3.7
1,177,224	-		MIT1002_01067	0.86	+0.2
1,177,224	-		MIT1002_01067	0.86	-0.2
1,177,224	-		MIT1002_01067	0.86	+1.7
1,177,226	+		MIT1002_01067	0.87	+1.1
1,177,226	+		MIT1002_01067	0.87	+0.1
1,177,230	+		MIT1002_01067	0.87	-0.5
1,177,231	+		MIT1002_01067	0.88	+1.0
1,177,231	+		MIT1002_01067	0.88	+0.1
1,177,231	+		MIT1002_01067	0.88	+0.8
1,177,359	-				-0.9
1,177,363	+				-0.5
1,177,424	+				-1.5
1,177,453	+				+0.5
1,177,498	+				-0.2
1,177,519	-				-1.2
1,177,545	+				+0.5
1,177,596	-				-2.0
1,177,627	-				+0.4
1,177,686	+				+1.7
1,177,715	-				+0.6
1,177,768	+		MIT1002_01068	0.27	-1.6
1,177,781	-		MIT1002_01068	0.32	+2.7
1,177,789	-		MIT1002_01068	0.36	-0.9
1,177,840	-		MIT1002_01068	0.57	-1.9
1,177,923	+				-0.8
1,177,932	-				+2.4
1,177,942	-				-2.1
1,178,020	-		MIT1002_01069	0.14	-0.2
1,178,079	-		MIT1002_01069	0.36	+0.1
1,178,102	+		MIT1002_01069	0.45	-0.0
1,178,118	+		MIT1002_01069	0.52	+0.1
1,178,128	+		MIT1002_01069	0.55	-1.2