Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_00938

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 7
1,038,223	+				+0.5
1,038,282	+				+0.2
1,038,282	+				-1.0
1,038,290	-				+2.6
1,038,290	-				-2.1
1,038,304	-		MIT1002_00937	0.12	-1.1
1,038,348	+		MIT1002_00937	0.20	+0.6
1,038,479	-		MIT1002_00937	0.43	-0.5
1,038,479	-		MIT1002_00937	0.43	+1.3
1,038,481	+		MIT1002_00937	0.43	-0.3
1,038,481	+		MIT1002_00937	0.43	+0.9
1,038,481	+		MIT1002_00937	0.43	+0.0
1,038,489	-		MIT1002_00937	0.45	+0.2
1,038,501	-		MIT1002_00937	0.47	+1.8
1,038,534	-		MIT1002_00937	0.52	-1.1
1,038,552	+		MIT1002_00937	0.55	+0.0
1,038,566	-		MIT1002_00937	0.58	-0.5
1,038,583	+		MIT1002_00937	0.61	-1.2
1,038,583	+		MIT1002_00937	0.61	-0.6
1,038,583	+		MIT1002_00937	0.61	-0.6
1,038,591	-		MIT1002_00937	0.62	-0.6
1,038,599	-		MIT1002_00937	0.64	+0.2
1,038,601	+		MIT1002_00937	0.64	-1.2
1,038,609	+		MIT1002_00937	0.65	-1.8
1,038,609	-		MIT1002_00937	0.65	-0.4
1,038,619	+		MIT1002_00937	0.67	-1.0
1,038,679	+		MIT1002_00937	0.78	-0.8
1,038,687	-		MIT1002_00937	0.79	+0.4
1,038,687	-		MIT1002_00937	0.79	+0.1
1,038,718	-		MIT1002_00937	0.84	-1.3
1,038,796	-				+1.2
1,038,818	+				+1.7
1,038,826	-				-2.5
1,038,826	-				-0.4
1,038,859	+				+1.3
1,038,897	-				+0.5
1,038,945	+				-0.3
1,038,959	+				-0.7
1,038,967	-				+1.7
1,039,019	-				+2.5
1,039,037	-				-1.6
1,039,059	+				+0.2
1,039,171	+				-1.0
1,039,174	-				-0.8
1,039,176	+				+0.8
1,039,190	+				-0.4
1,039,251	-		MIT1002_00938	0.17	+0.4
1,039,323	+		MIT1002_00938	0.26	-1.1
1,039,355	-		MIT1002_00938	0.30	+0.9
1,039,355	-		MIT1002_00938	0.30	+0.7
1,039,367	+		MIT1002_00938	0.32	-0.3
1,039,375	-		MIT1002_00938	0.33	+3.5
1,039,375	-		MIT1002_00938	0.33	+0.4
1,039,375	-		MIT1002_00938	0.33	-0.7
1,039,380	-		MIT1002_00938	0.33	-0.2
1,039,431	+		MIT1002_00938	0.40	+1.3
1,039,494	-		MIT1002_00938	0.48	+3.0
1,039,507	-		MIT1002_00938	0.49	+0.2
1,039,511	+		MIT1002_00938	0.50	+0.4
1,039,511	+		MIT1002_00938	0.50	-0.4
1,039,753	+		MIT1002_00938	0.80	-0.3
1,039,753	+		MIT1002_00938	0.80	+3.2
1,039,753	+		MIT1002_00938	0.80	-0.3
1,039,761	-		MIT1002_00938	0.81	+1.2
1,039,761	-		MIT1002_00938	0.81	+0.2
1,039,822	+		MIT1002_00938	0.89	+0.7
1,039,879	+				+0.3
1,039,902	-				+1.0
1,040,008	+				-0.4
1,040,039	-				-0.4
1,040,049	-				+0.5
1,040,121	+				-1.1
1,040,121	+				-1.7
1,040,155	+		MIT1002_00939	0.11	-0.2
1,040,171	-		MIT1002_00939	0.13	-1.4
1,040,171	-		MIT1002_00939	0.13	+0.5
1,040,247	+		MIT1002_00939	0.20	+0.4
1,040,255	-		MIT1002_00939	0.20	+1.2
1,040,257	+		MIT1002_00939	0.20	+0.4
1,040,265	-		MIT1002_00939	0.21	+0.6
1,040,444	-		MIT1002_00939	0.37	-0.2
1,040,480	+		MIT1002_00939	0.40	+0.0
1,040,482	+		MIT1002_00939	0.40	+1.7
1,040,490	-		MIT1002_00939	0.41	+2.4
1,040,574	+		MIT1002_00939	0.48	+2.0
1,040,589	+		MIT1002_00939	0.50	-0.8
1,040,597	+		MIT1002_00939	0.50	-0.6
1,040,604	+		MIT1002_00939	0.51	+1.4
1,040,612	-		MIT1002_00939	0.52	-0.3
1,040,698	+		MIT1002_00939	0.59	-1.2
1,040,698	+		MIT1002_00939	0.59	-0.3
1,040,698	+		MIT1002_00939	0.59	-0.0
1,040,698	+		MIT1002_00939	0.59	+2.6
1,040,701	-		MIT1002_00939	0.59	+1.4
1,040,706	-		MIT1002_00939	0.60	-0.1
1,040,756	+		MIT1002_00939	0.64	-1.5
1,040,757	-		MIT1002_00939	0.64	-2.1
1,040,856	+		MIT1002_00939	0.73	-0.6
1,040,864	-		MIT1002_00939	0.74	+1.4
1,040,881	+		MIT1002_00939	0.75	-0.6