Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_00909

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 7
1,006,308	-				-0.9
1,006,391	+				-1.1
1,006,391	+				+1.3
1,006,399	-				-1.3
1,006,411	-				-0.5
1,006,411	-				+0.1
1,006,411	-				+1.2
1,006,476	+				-1.7
1,006,484	-				-2.5
1,006,484	-				+0.0
1,006,498	+				-0.1
1,006,614	+				+1.6
1,006,645	+		MIT1002_00909	0.13	-2.1
1,006,645	+		MIT1002_00909	0.13	-0.2
1,006,653	-		MIT1002_00909	0.14	-0.2
1,006,781	-		MIT1002_00909	0.29	+0.7
1,006,842	+		MIT1002_00909	0.36	-1.3
1,006,918	+		MIT1002_00909	0.44	-1.7
1,006,926	-		MIT1002_00909	0.45	+0.1
1,006,937	+		MIT1002_00909	0.47	-2.2
1,006,937	+		MIT1002_00909	0.47	-0.8
1,006,980	-		MIT1002_00909	0.51	-0.9
1,006,985	+		MIT1002_00909	0.52	-1.1
1,007,000	+		MIT1002_00909	0.54	-1.3
1,007,044	-		MIT1002_00909	0.59	+0.7
1,007,072	-		MIT1002_00909	0.62	-1.3
1,007,074	+		MIT1002_00909	0.62	-2.2
1,007,074	+		MIT1002_00909	0.62	-2.7
1,007,082	-		MIT1002_00909	0.63	+0.1
1,007,082	-		MIT1002_00909	0.63	-1.5
1,007,164	+		MIT1002_00909	0.72	-0.5
1,007,172	-		MIT1002_00909	0.73	-1.1
1,007,179	+		MIT1002_00909	0.74	+1.4
1,007,254	+		MIT1002_00909	0.83	-1.3
1,007,262	-		MIT1002_00909	0.84	-0.8
1,007,347	+				-1.4
1,007,363	-				-1.1
1,007,425	-				-1.0
1,007,517	+		MIT1002_00910	0.10	+0.7
1,007,517	+		MIT1002_00910	0.10	-1.0
1,007,518	-		MIT1002_00910	0.10	-2.6
1,007,606	-		MIT1002_00910	0.18	-1.4
1,007,667	-		MIT1002_00910	0.23	+1.6
1,007,667	-		MIT1002_00910	0.23	+0.1
1,007,744	+		MIT1002_00910	0.30	-2.5
1,007,744	+		MIT1002_00910	0.30	-1.3
1,007,744	+		MIT1002_00910	0.30	+0.6
1,007,752	-		MIT1002_00910	0.31	-1.7
1,007,752	-		MIT1002_00910	0.31	-3.0
1,007,753	+		MIT1002_00910	0.31	-0.3
1,007,794	+		MIT1002_00910	0.34	-1.5
1,007,866	+		MIT1002_00910	0.41	+0.1
1,007,866	+		MIT1002_00910	0.41	+2.0
1,007,909	+		MIT1002_00910	0.44	-4.0
1,007,932	-		MIT1002_00910	0.46	-2.4
1,008,039	-		MIT1002_00910	0.56	-0.3
1,008,048	-		MIT1002_00910	0.57	-0.8
1,008,076	-		MIT1002_00910	0.59	-1.0
1,008,102	+		MIT1002_00910	0.61	-0.1
1,008,207	+		MIT1002_00910	0.71	-0.4
1,008,236	+		MIT1002_00910	0.73	-1.3
1,008,281	-		MIT1002_00910	0.77	-2.3
1,008,294	+		MIT1002_00910	0.78	+2.3
1,008,334	+		MIT1002_00910	0.82	-1.4
1,008,334	+		MIT1002_00910	0.82	-0.4
1,008,334	+		MIT1002_00910	0.82	-1.7
1,008,334	+		MIT1002_00910	0.82	+0.6
1,008,342	-		MIT1002_00910	0.82	-1.2
1,008,357	-		MIT1002_00910	0.84	+0.2
1,008,396	-		MIT1002_00910	0.87	-0.2