Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS12520

Experiment: biofilm; Day2; NLDM; Aluminum chloride 1mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day2; NLDM; Aluminum chloride 1mM
2,771,277	+		LRK53_RS12510	0.51	-1.7
2,771,277	+		LRK53_RS12510	0.51	+0.9
2,771,277	+		LRK53_RS12510	0.51	-2.5
2,771,277	+		LRK53_RS12510	0.51	-1.4
2,771,277	+		LRK53_RS12510	0.51	+0.5
2,771,277	+		LRK53_RS12510	0.51	-0.4
2,771,277	+		LRK53_RS12510	0.51	-0.1
2,771,277	+		LRK53_RS12510	0.51	-0.1
2,771,277	+		LRK53_RS12510	0.51	-0.5
2,771,277	+		LRK53_RS12510	0.51	+1.5
2,771,277	+		LRK53_RS12510	0.51	-1.2
2,771,277	+		LRK53_RS12510	0.51	-0.9
2,771,277	+		LRK53_RS12510	0.51	-2.0
2,771,278	-		LRK53_RS12510	0.51	+1.3
2,771,278	-		LRK53_RS12510	0.51	-0.4
2,771,278	-		LRK53_RS12510	0.51	-0.3
2,771,278	-		LRK53_RS12510	0.51	+1.2
2,771,278	-		LRK53_RS12510	0.51	+1.4
2,771,278	-		LRK53_RS12510	0.51	-0.6
2,771,278	-		LRK53_RS12510	0.51	-0.1
2,771,278	-		LRK53_RS12510	0.51	+0.7
2,771,278	-		LRK53_RS12510	0.51	+0.6
2,771,278	-		LRK53_RS12510	0.51	-2.8
2,771,278	-		LRK53_RS12510	0.51	+0.0
2,771,278	-		LRK53_RS12510	0.51	-0.8
2,771,278	-		LRK53_RS12510	0.51	-0.2
2,771,283	+		LRK53_RS12510	0.53	-0.6
2,771,283	+		LRK53_RS12510	0.53	-1.2
2,771,283	+		LRK53_RS12510	0.53	-2.8
2,771,283	+		LRK53_RS12510	0.53	-1.5
2,771,283	+		LRK53_RS12510	0.53	-1.5
2,771,283	+		LRK53_RS12510	0.53	+0.2
2,771,283	+		LRK53_RS12510	0.53	-0.9
2,771,283	+		LRK53_RS12510	0.53	-1.4
2,771,283	+		LRK53_RS12510	0.53	-1.8
2,771,283	+		LRK53_RS12510	0.53	-0.6
2,771,283	+		LRK53_RS12510	0.53	-0.2
2,771,283	+		LRK53_RS12510	0.53	+0.6
2,771,283	+		LRK53_RS12510	0.53	-0.4
2,771,283	+		LRK53_RS12510	0.53	-0.5
2,771,283	+		LRK53_RS12510	0.53	-3.0
2,771,283	+		LRK53_RS12510	0.53	-1.1
2,771,283	+		LRK53_RS12510	0.53	-0.1
2,771,283	+		LRK53_RS12510	0.53	-2.8
2,771,283	+		LRK53_RS12510	0.53	+0.1
2,771,283	+		LRK53_RS12510	0.53	+0.9
2,771,283	+		LRK53_RS12510	0.53	+0.8
2,771,283	+		LRK53_RS12510	0.53	-1.3
2,771,283	+		LRK53_RS12510	0.53	-0.6
2,771,284	-		LRK53_RS12510	0.53	-2.1
2,771,284	-		LRK53_RS12510	0.53	-0.7
2,771,284	-		LRK53_RS12510	0.53	-0.8
2,771,284	-		LRK53_RS12510	0.53	-0.5
2,771,284	-		LRK53_RS12510	0.53	-4.0
2,771,284	-		LRK53_RS12510	0.53	-2.2
2,771,284	-		LRK53_RS12510	0.53	-1.2
2,771,284	-		LRK53_RS12510	0.53	-0.4
2,771,284	-		LRK53_RS12510	0.53	-0.1
2,771,284	-		LRK53_RS12510	0.53	-2.2
2,771,284	-		LRK53_RS12510	0.53	+0.5
2,771,284	-		LRK53_RS12510	0.53	-0.6
2,771,284	-		LRK53_RS12510	0.53	-0.3
2,771,284	-		LRK53_RS12510	0.53	-0.2
2,771,284	-		LRK53_RS12510	0.53	-1.8
2,771,284	-		LRK53_RS12510	0.53	-3.9
2,771,284	-		LRK53_RS12510	0.53	-1.1
2,771,284	-		LRK53_RS12510	0.53	-3.5
2,771,284	-		LRK53_RS12510	0.53	+0.1
2,771,284	-		LRK53_RS12510	0.53	-1.5
2,771,284	-		LRK53_RS12510	0.53	-1.7
2,771,284	-		LRK53_RS12510	0.53	-1.2
2,771,284	-		LRK53_RS12510	0.53	-0.2
2,771,337	+		LRK53_RS12510	0.65	+0.5
2,771,337	+		LRK53_RS12510	0.65	-1.4
2,771,338	-		LRK53_RS12510	0.66	+1.4
2,771,338	-		LRK53_RS12510	0.66	-1.2
2,771,338	-		LRK53_RS12510	0.66	+1.3
2,771,338	-		LRK53_RS12510	0.66	-0.3
2,771,358	+		LRK53_RS12510	0.71	-1.4
2,771,358	+		LRK53_RS12510	0.71	-2.4
2,771,358	+		LRK53_RS12510	0.71	+1.0
2,771,358	+		LRK53_RS12510	0.71	+0.1
2,771,358	+		LRK53_RS12510	0.71	-1.2
2,771,359	-		LRK53_RS12510	0.71	+1.2
2,771,359	-		LRK53_RS12510	0.71	-0.3
2,771,359	-		LRK53_RS12510	0.71	-0.1
2,771,359	-		LRK53_RS12510	0.71	+0.3
2,771,386	+		LRK53_RS12510	0.77	-3.2
2,771,387	-		LRK53_RS12510	0.77	-1.0
2,771,478	+				+0.3
2,771,478	+				+0.3
2,771,479	-				+0.5
2,771,479	-				+1.1
2,771,479	-				-0.1
2,771,479	-				-0.4
2,771,508	+				-1.0
2,771,508	+				-0.8
2,771,508	+				+0.1
2,771,508	+				-0.2
2,771,553	+				-0.5
2,771,554	-				-0.1
2,771,554	-				-0.3
2,771,559	+				+0.3
2,771,582	+				-1.2
2,771,583	-				+1.1
2,771,604	+				-0.7
2,771,605	-				-1.5
2,771,605	-				-0.8
2,771,605	-				-2.0
2,771,614	+				-1.6
2,771,637	+		LRK53_RS12515	0.16	-0.8
2,771,637	+		LRK53_RS12515	0.16	-1.5
2,771,638	-		LRK53_RS12515	0.16	-2.5
2,771,638	-		LRK53_RS12515	0.16	+0.7
2,771,638	-		LRK53_RS12515	0.16	-2.5
2,771,638	-		LRK53_RS12515	0.16	+2.3
2,771,638	-		LRK53_RS12515	0.16	+0.6
2,771,638	-		LRK53_RS12515	0.16	-0.5
2,771,833	+		LRK53_RS12515	0.68	-0.7
2,771,833	+		LRK53_RS12515	0.68	+1.6
2,771,834	-		LRK53_RS12515	0.69	-3.3
2,771,834	-		LRK53_RS12515	0.69	+0.9
2,771,889	+		LRK53_RS12515	0.83	-0.2
2,771,889	+		LRK53_RS12515	0.83	-1.9
2,771,890	-		LRK53_RS12515	0.83	-0.9
2,771,890	-		LRK53_RS12515	0.83	-1.3
2,771,890	-		LRK53_RS12515	0.83	-0.9
2,771,905	+		LRK53_RS12515	0.87	-2.9
2,772,029	+				-3.6
2,772,029	+				-1.7
2,772,029	+				-0.8
2,772,030	-				-2.4
2,772,061	-				-1.2
2,772,061	-				-0.8
2,772,061	-				-1.1
2,772,061	-				+0.3
2,772,061	-				-3.0
2,772,064	+				-1.1
2,772,064	+				+0.3
2,772,064	+				+1.5
2,772,064	+				+0.9
2,772,064	+				-3.0
2,772,064	+				-0.8
2,772,064	+				-0.9
2,772,064	+				-2.2
2,772,064	+				-0.4
2,772,064	+				+0.6
2,772,064	+				-0.1
2,772,064	+				-0.2
2,772,064	+				-0.1
2,772,064	+				+0.2
2,772,064	+				-0.5
2,772,064	+				-1.1
2,772,064	+				+0.0
2,772,064	+				-1.3
2,772,064	+				-0.0
2,772,065	-				-0.7
2,772,065	-				-0.4
2,772,065	-				-0.8
2,772,065	-				-0.9
2,772,065	-				-2.8
2,772,065	-				-0.7
2,772,065	-				+0.1
2,772,065	-				-0.5
2,772,065	-				-1.0
2,772,065	-				-0.4
2,772,065	-				-1.9
2,772,065	-				+0.9
2,772,065	-				-0.4
2,772,065	-				-0.2
2,772,065	-				-2.0
2,772,065	-				+0.1
2,772,065	-				-0.3
2,772,065	-				-1.2
2,772,084	+				-2.5
2,772,084	+				-0.4
2,772,255	+				+0.1
2,772,255	+				-1.2
2,772,255	+				-1.5
2,772,256	-				-1.2
2,772,256	-				-0.2
2,772,378	+				-0.2
2,772,378	+				-1.2
2,772,378	+				-1.0
2,772,378	+				-2.2
2,772,378	+				-1.5
2,772,378	+				-1.5
2,772,378	+				-0.5
2,772,379	-				+0.7
2,772,379	-				+1.2
2,772,379	-				-0.8
2,772,379	-				-1.1
2,772,379	-				-0.4
2,772,379	-				-1.2
2,772,379	-				+0.9
2,772,379	-				-0.5
2,772,379	-				+0.5
2,772,379	-				+1.7
2,772,379	-				+2.6
2,772,429	+		LRK53_RS12520	0.11	-0.5
2,772,429	+		LRK53_RS12520	0.11	+0.5
2,772,429	+		LRK53_RS12520	0.11	-1.1
2,772,429	+		LRK53_RS12520	0.11	-0.4
2,772,429	+		LRK53_RS12520	0.11	+1.6
2,772,429	+		LRK53_RS12520	0.11	+1.0
2,772,429	+		LRK53_RS12520	0.11	-0.8
2,772,429	+		LRK53_RS12520	0.11	+0.3
2,772,429	+		LRK53_RS12520	0.11	-2.2
2,772,429	+		LRK53_RS12520	0.11	+0.4
2,772,429	+		LRK53_RS12520	0.11	-0.9
2,772,429	+		LRK53_RS12520	0.11	-0.7
2,772,429	+		LRK53_RS12520	0.11	-0.1
2,772,429	+		LRK53_RS12520	0.11	+0.2
2,772,430	-		LRK53_RS12520	0.11	-0.1
2,772,430	-		LRK53_RS12520	0.11	-3.2
2,772,430	-		LRK53_RS12520	0.11	-0.8
2,772,430	-		LRK53_RS12520	0.11	-0.9
2,772,430	-		LRK53_RS12520	0.11	-1.9
2,772,430	-		LRK53_RS12520	0.11	+1.9
2,772,430	-		LRK53_RS12520	0.11	-3.8
2,772,433	-		LRK53_RS12520	0.11	+2.6
2,772,433	-		LRK53_RS12520	0.11	-0.2
2,772,892	-		LRK53_RS12520	0.42	-2.2
2,772,966	+		LRK53_RS12520	0.46	-1.8
2,772,966	+		LRK53_RS12520	0.46	-2.7
2,772,966	+		LRK53_RS12520	0.46	-0.4
2,772,966	+		LRK53_RS12520	0.46	-0.7
2,772,966	+		LRK53_RS12520	0.46	+0.7
2,772,966	+		LRK53_RS12520	0.46	-2.6
2,772,966	+		LRK53_RS12520	0.46	-1.7
2,772,966	+		LRK53_RS12520	0.46	-1.2
2,772,967	-		LRK53_RS12520	0.46	-1.1
2,772,967	-		LRK53_RS12520	0.46	+1.1
2,772,967	-		LRK53_RS12520	0.46	-0.5
2,772,967	-		LRK53_RS12520	0.46	-0.8
2,772,967	-		LRK53_RS12520	0.46	-1.7
2,772,967	-		LRK53_RS12520	0.46	-0.7
2,772,967	-		LRK53_RS12520	0.46	-1.0
2,773,548	+		LRK53_RS12520	0.85	-0.7
2,773,548	+		LRK53_RS12520	0.85	+1.5
2,773,548	+		LRK53_RS12520	0.85	+1.1
2,773,548	+		LRK53_RS12520	0.85	-1.5
2,773,548	+		LRK53_RS12520	0.85	-1.8
2,773,549	-		LRK53_RS12520	0.85	-1.6
2,773,549	-		LRK53_RS12520	0.85	-3.3
2,773,692	+				-1.2
2,773,693	-				-0.6
2,773,793	+				-1.1
2,773,793	+				-0.3
2,773,793	+				-1.3
2,773,793	+				-1.0
2,773,793	+				-0.4
2,773,793	+				-0.2
2,773,793	+				-1.4
2,773,793	+				-0.0
2,773,793	+				-2.3
2,773,793	+				-0.2
2,773,793	+				-2.3
2,773,793	+				+0.6
2,773,793	+				+0.2
2,773,794	-				-2.6
2,773,794	-				-0.1
2,773,794	-				-1.3
2,773,794	-				-0.4
2,773,794	-				-1.3
2,773,794	-				+0.2
2,773,796	+				+0.1
2,773,796	+				-0.9
2,773,796	+				-0.7
2,773,797	-				+0.1
2,773,797	-				+0.2
2,773,797	-				-3.3
2,773,797	-				-1.1
2,773,797	-				+1.8
2,773,958	+		LRK53_RS12525	0.39	-1.6
2,773,958	+		LRK53_RS12525	0.39	-1.9
2,773,958	+		LRK53_RS12525	0.39	-0.3
2,773,958	+		LRK53_RS12525	0.39	-1.4
2,773,958	+		LRK53_RS12525	0.39	-0.7
2,773,958	+		LRK53_RS12525	0.39	-1.6
2,773,959	-		LRK53_RS12525	0.39	-0.2
2,773,959	-		LRK53_RS12525	0.39	-3.0
2,773,959	-		LRK53_RS12525	0.39	-1.2
2,774,072	+		LRK53_RS12525	0.63	-1.4
2,774,072	+		LRK53_RS12525	0.63	-2.9
2,774,073	-		LRK53_RS12525	0.63	+0.4
2,774,073	-		LRK53_RS12525	0.63	-0.2
2,774,073	-		LRK53_RS12525	0.63	+1.3
2,774,073	-		LRK53_RS12525	0.63	-2.0
2,774,231	+				-2.4
2,774,232	-				-3.0
2,774,232	-				+0.3
2,774,249	+				+0.7
2,774,249	+				-0.4
2,774,469	+		LRK53_RS12530	0.15	-3.3
2,774,470	-		LRK53_RS12530	0.15	+0.5
2,774,758	+		LRK53_RS12530	0.85	-0.1
2,774,758	+		LRK53_RS12530	0.85	-1.2
2,774,758	+		LRK53_RS12530	0.85	+0.6
2,774,759	-		LRK53_RS12530	0.86	-4.1
2,774,759	-		LRK53_RS12530	0.86	-1.1
2,774,759	-		LRK53_RS12530	0.86	-1.7
2,774,759	-		LRK53_RS12530	0.86	+0.9