Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS10760

Experiment: biofilm; Day2; NLDM; Aluminum chloride 1mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day2; NLDM; Aluminum chloride 1mM
2,403,526	+				+2.1
2,403,526	+				-2.6
2,403,526	+				-0.5
2,403,526	+				-0.0
2,403,527	-				+1.2
2,403,576	+				-1.0
2,403,576	+				-0.6
2,403,576	+				+0.1
2,403,576	+				-0.1
2,403,577	-				-1.3
2,403,577	-				-0.2
2,403,618	+				-0.2
2,403,618	+				+1.0
2,403,618	+				+0.3
2,403,618	+				-0.9
2,403,618	+				-0.4
2,403,618	+				-1.5
2,403,618	+				+0.5
2,403,618	+				-0.9
2,403,618	+				-2.4
2,403,618	+				+0.1
2,403,618	+				+2.0
2,403,619	-				-1.2
2,403,619	-				-0.7
2,403,619	-				-0.8
2,403,619	-				+1.1
2,403,619	-				+2.3
2,403,619	-				+1.5
2,403,619	-				-2.2
2,403,619	-				-1.0
2,403,619	-				-0.4
2,403,619	-				-2.8
2,403,619	-				+2.2
2,403,619	-				-0.9
2,403,619	-				-1.2
2,403,619	-				-1.1
2,403,619	-				+0.3
2,403,619	-				-0.7
2,403,630	+				-1.1
2,403,631	-				-1.1
2,403,684	+				-0.1
2,403,684	+				+0.6
2,403,684	+				-2.2
2,403,685	-				-0.5
2,403,685	-				-2.3
2,403,685	-				-0.8
2,403,685	-				-0.7
2,403,685	-				-3.4
2,403,721	+				+2.4
2,403,721	+				-1.2
2,403,799	+				+0.3
2,403,799	+				-0.2
2,403,799	+				-1.8
2,403,799	+				-1.2
2,403,799	+				-2.0
2,403,799	+				+0.4
2,403,799	+				-2.2
2,403,799	+				-0.3
2,403,799	+				-1.0
2,403,799	+				-0.7
2,403,799	+				-2.2
2,403,800	-				+1.6
2,403,800	-				-1.7
2,403,800	-				-1.0
2,403,800	-				-0.9
2,403,800	-				-0.4
2,403,800	-				-0.5
2,403,800	-				-0.9
2,403,800	-				-1.0
2,403,800	-				-0.4
2,403,800	-				+0.0
2,403,800	-				+1.9
2,403,800	-				-0.2
2,403,800	-				+0.7
2,403,800	-				-0.5
2,403,800	-				-1.9
2,403,800	-				-1.2
2,403,800	-				-0.7
2,403,837	+				-1.2
2,403,837	+				-1.3
2,403,837	+				-1.2
2,403,837	+				+2.2
2,403,837	+				-0.6
2,403,837	+				-0.0
2,403,837	+				-0.7
2,403,837	+				-0.4
2,403,837	+				-1.6
2,403,837	+				-0.8
2,403,838	-				-2.6
2,403,838	-				-0.3
2,403,838	-				+1.4
2,403,838	-				-0.4
2,403,838	-				-0.5
2,403,838	-				-0.0
2,403,840	+				-2.5
2,403,840	+				-0.2
2,403,840	+				-2.0
2,403,840	+				-0.5
2,403,840	+				-0.1
2,403,841	-				-0.9
2,403,841	-				-3.6
2,403,841	-				-1.2
2,403,841	-				-1.4
2,403,841	-				-1.3
2,403,841	-				+0.8
2,403,841	-				+0.5
2,403,841	-				-0.4
2,403,841	-				+2.6
2,403,841	-				-0.7
2,403,841	-				+1.1
2,403,857	+				-0.9
2,403,866	+				-1.8
2,403,866	+				-1.1
2,403,867	-				+0.4
2,403,867	-				-1.8
2,404,070	+		LRK53_RS10755	0.33	-0.9
2,404,070	+		LRK53_RS10755	0.33	-0.4
2,404,070	+		LRK53_RS10755	0.33	-0.2
2,404,070	+		LRK53_RS10755	0.33	-0.6
2,404,070	+		LRK53_RS10755	0.33	-0.3
2,404,070	+		LRK53_RS10755	0.33	-0.6
2,404,071	-		LRK53_RS10755	0.33	-0.4
2,404,071	-		LRK53_RS10755	0.33	-1.4
2,404,071	-		LRK53_RS10755	0.33	+0.1
2,404,071	-		LRK53_RS10755	0.33	+1.3
2,404,071	-		LRK53_RS10755	0.33	-2.5
2,404,193	+		LRK53_RS10755	0.52	+0.5
2,404,194	-		LRK53_RS10755	0.52	-1.9
2,404,194	-		LRK53_RS10755	0.52	+1.3
2,404,194	-		LRK53_RS10755	0.52	-1.0
2,404,325	+		LRK53_RS10755	0.73	-0.4
2,404,325	+		LRK53_RS10755	0.73	-2.6
2,404,325	+		LRK53_RS10755	0.73	-0.5
2,404,326	-		LRK53_RS10755	0.73	+0.0
2,404,326	-		LRK53_RS10755	0.73	-0.9
2,404,326	-		LRK53_RS10755	0.73	-0.3
2,404,326	-		LRK53_RS10755	0.73	-2.3
2,404,331	+		LRK53_RS10755	0.74	-0.4
2,404,451	+				-1.5
2,404,451	+				-1.1
2,404,451	+				-0.9
2,404,451	+				-2.3
2,404,451	+				-0.6
2,404,451	+				+0.4
2,404,451	+				-0.7
2,404,452	-				+1.9
2,404,452	-				-0.3
2,404,452	-				-0.2
2,404,452	-				+1.0
2,404,452	-				-2.3
2,404,452	-				+0.8
2,404,452	-				-1.2
2,404,469	+				-1.3
2,404,469	+				-2.2
2,404,469	+				+0.3
2,404,469	+				-3.5
2,404,469	+				+0.2
2,404,469	+				-1.0
2,404,469	+				+1.5
2,404,469	+				+1.2
2,404,469	+				-0.9
2,404,469	+				-1.6
2,404,469	+				-0.5
2,404,469	+				-1.0
2,404,469	+				-1.8
2,404,469	+				+0.8
2,404,469	+				+0.4
2,404,469	+				-0.6
2,404,469	+				-0.1
2,404,469	+				-0.2
2,404,469	+				-2.7
2,404,469	+				-0.2
2,404,469	+				-1.1
2,404,469	+				-2.7
2,404,469	+				-0.2
2,404,469	+				+0.4
2,404,469	+				-2.0
2,404,469	+				-0.4
2,404,469	+				+1.5
2,404,469	+				-0.5
2,404,469	+				-0.1
2,404,469	+				-1.0
2,404,469	+				+0.4
2,404,469	+				-0.2
2,404,469	+				-1.9
2,404,470	-				-1.2
2,404,470	-				+0.2
2,404,470	-				+1.4
2,404,470	-				+1.3
2,404,470	-				-1.3
2,404,470	-				-1.3
2,404,470	-				-3.4
2,404,470	-				-0.4
2,404,470	-				-0.5
2,404,470	-				-0.2
2,404,470	-				-0.8
2,404,470	-				+0.6
2,404,470	-				-1.0
2,404,470	-				-0.2
2,404,470	-				-1.7
2,404,470	-				-0.7
2,404,470	-				-1.1
2,404,470	-				+0.9
2,404,470	-				-2.0
2,404,470	-				-2.1
2,404,470	-				-1.1
2,404,470	-				+0.3
2,404,470	-				+1.0
2,404,470	-				-3.0
2,404,470	-				-3.6
2,404,470	-				-0.6
2,404,470	-				-1.0
2,404,470	-				-1.1
2,404,470	-				-0.4
2,404,470	-				-0.7
2,404,470	-				+0.8
2,404,470	-				-0.8
2,404,470	-				-1.3
2,404,470	-				-2.1
2,404,470	-				-1.1
2,404,470	-				-2.3
2,404,470	-				-0.5
2,404,470	-				+1.7
2,404,470	-				+0.3
2,404,470	-				-1.5
2,404,470	-				-1.6
2,404,470	-				+0.5
2,404,470	-				+2.0
2,404,470	-				-0.7
2,404,470	-				-0.3
2,404,470	-				+0.5
2,404,470	-				+0.0
2,404,470	-				+0.1
2,404,470	-				-0.7
2,404,470	-				+4.2
2,404,470	-				-0.2
2,404,470	-				-0.7
2,404,470	-				-0.7
2,404,484	+				-0.2
2,404,484	+				+0.2
2,404,549	-				-0.5
2,404,699	+		LRK53_RS10760	0.41	-0.8
2,404,699	+		LRK53_RS10760	0.41	+0.1
2,404,699	+		LRK53_RS10760	0.41	-1.4
2,404,699	+		LRK53_RS10760	0.41	-2.5
2,404,699	+		LRK53_RS10760	0.41	+0.5
2,404,700	-		LRK53_RS10760	0.42	+1.0
2,404,700	-		LRK53_RS10760	0.42	-0.2
2,404,700	-		LRK53_RS10760	0.42	-0.5
2,404,762	+		LRK53_RS10760	0.56	+0.1
2,404,762	+		LRK53_RS10760	0.56	-1.3
2,404,762	+		LRK53_RS10760	0.56	-0.4
2,404,762	+		LRK53_RS10760	0.56	-0.5
2,404,762	+		LRK53_RS10760	0.56	+1.8
2,404,763	-		LRK53_RS10760	0.56	+1.0
2,404,763	-		LRK53_RS10760	0.56	-2.6
2,404,763	-		LRK53_RS10760	0.56	-1.0
2,404,783	-		LRK53_RS10760	0.60	+1.7
2,404,998	+				-1.8
2,404,999	-				-1.3
2,405,010	+				-3.0
2,405,010	+				-0.5
2,405,010	+				-0.3
2,405,010	+				+1.6
2,405,011	-				-2.2
2,405,011	-				-2.9
2,405,011	-				+1.7
2,405,011	-				-2.7
2,405,011	-				-0.9
2,405,011	-				-0.7
2,405,011	-				-1.8
2,405,011	-				-1.3
2,405,029	+				-0.7
2,405,029	+				+1.7
2,405,040	+				+3.6
2,405,040	+				+0.2
2,405,041	-				-0.7
2,405,043	+				-1.9
2,405,044	-				-0.0
2,405,136	+		LRK53_RS10765	0.11	-1.7
2,405,136	+		LRK53_RS10765	0.11	-0.9
2,405,136	+		LRK53_RS10765	0.11	+0.2
2,405,136	+		LRK53_RS10765	0.11	-0.3
2,405,136	+		LRK53_RS10765	0.11	-0.5
2,405,137	-		LRK53_RS10765	0.12	-1.9
2,405,137	-		LRK53_RS10765	0.12	-0.8
2,405,137	-		LRK53_RS10765	0.12	-0.7
2,405,137	-		LRK53_RS10765	0.12	-1.2
2,405,137	-		LRK53_RS10765	0.12	-1.7
2,405,137	-		LRK53_RS10765	0.12	-1.5
2,405,137	-		LRK53_RS10765	0.12	+0.4
2,405,163	+		LRK53_RS10765	0.14	-1.0
2,405,163	+		LRK53_RS10765	0.14	-2.5
2,405,163	+		LRK53_RS10765	0.14	-2.2
2,405,163	+		LRK53_RS10765	0.14	-0.0
2,405,163	+		LRK53_RS10765	0.14	-0.4
2,405,163	+		LRK53_RS10765	0.14	-2.0
2,405,164	-		LRK53_RS10765	0.14	-3.3
2,405,164	-		LRK53_RS10765	0.14	-1.9
2,405,164	-		LRK53_RS10765	0.14	+2.7
2,405,164	-		LRK53_RS10765	0.14	-1.0
2,405,164	-		LRK53_RS10765	0.14	-2.0
2,405,164	-		LRK53_RS10765	0.14	-1.0
2,405,164	-		LRK53_RS10765	0.14	-0.7
2,405,164	-		LRK53_RS10765	0.14	-0.2
2,405,164	-		LRK53_RS10765	0.14	-1.9
2,405,164	-		LRK53_RS10765	0.14	-2.3
2,405,164	-		LRK53_RS10765	0.14	-0.4
2,405,164	-		LRK53_RS10765	0.14	-1.9
2,405,164	-		LRK53_RS10765	0.14	-3.0
2,405,164	-		LRK53_RS10765	0.14	-1.5
2,405,169	-		LRK53_RS10765	0.15	+1.9
2,405,169	-		LRK53_RS10765	0.15	-1.7
2,405,169	-		LRK53_RS10765	0.15	-1.3
2,405,181	+		LRK53_RS10765	0.16	-1.1
2,405,182	-		LRK53_RS10765	0.16	+0.5
2,405,182	-		LRK53_RS10765	0.16	-1.9
2,405,182	-		LRK53_RS10765	0.16	-1.0
2,405,182	-		LRK53_RS10765	0.16	-1.7
2,405,498	+		LRK53_RS10765	0.48	-1.8
2,405,498	+		LRK53_RS10765	0.48	-2.4
2,405,762	+		LRK53_RS10765	0.75	-1.0
2,405,763	-		LRK53_RS10765	0.75	-1.0
2,405,807	+		LRK53_RS10765	0.80	-2.6