Experiment: Motility_inner_sample
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS11700 and QEN71_RS11705 are separated by 26 nucleotides QEN71_RS11705 and QEN71_RS11710 are separated by 1 nucleotides QEN71_RS11710 and QEN71_RS11715 are separated by 63 nucleotides
QEN71_RS11700: QEN71_RS11700 - ABC transporter ATP-binding protein, at 2,606,575 to 2,607,660
_RS11700
QEN71_RS11705: QEN71_RS11705 - ABC transporter permease, at 2,607,687 to 2,608,481
_RS11705
QEN71_RS11710: QEN71_RS11710 - ABC transporter permease, at 2,608,483 to 2,609,364
_RS11710
QEN71_RS11715: QEN71_RS11715 - ABC transporter substrate-binding protein, at 2,609,428 to 2,610,459
_RS11715
Position (kb)
2608
2609
2610 Strain fitness (log2 ratio)
-2
-1
0
1 at 2607.519 kb on - strand, within QEN71_RS11700 at 2607.519 kb on - strand, within QEN71_RS11700 at 2607.519 kb on - strand, within QEN71_RS11700 at 2607.519 kb on - strand, within QEN71_RS11700 at 2607.519 kb on - strand, within QEN71_RS11700 at 2607.519 kb on - strand, within QEN71_RS11700 at 2607.621 kb on - strand at 2607.679 kb on + strand at 2607.680 kb on - strand at 2607.680 kb on - strand at 2607.680 kb on - strand at 2608.108 kb on + strand, within QEN71_RS11705 at 2608.497 kb on + strand at 2608.535 kb on + strand at 2608.640 kb on + strand, within QEN71_RS11710 at 2608.640 kb on + strand, within QEN71_RS11710 at 2608.640 kb on + strand, within QEN71_RS11710 at 2608.640 kb on + strand, within QEN71_RS11710 at 2608.641 kb on - strand, within QEN71_RS11710 at 2608.641 kb on - strand, within QEN71_RS11710 at 2608.641 kb on - strand, within QEN71_RS11710 at 2608.641 kb on - strand, within QEN71_RS11710 at 2608.862 kb on + strand, within QEN71_RS11710 at 2608.862 kb on + strand, within QEN71_RS11710 at 2608.862 kb on + strand, within QEN71_RS11710 at 2608.862 kb on + strand, within QEN71_RS11710 at 2608.862 kb on + strand, within QEN71_RS11710 at 2608.862 kb on + strand, within QEN71_RS11710 at 2608.863 kb on - strand, within QEN71_RS11710 at 2608.863 kb on - strand, within QEN71_RS11710 at 2608.863 kb on - strand, within QEN71_RS11710 at 2608.863 kb on - strand, within QEN71_RS11710 at 2608.863 kb on - strand, within QEN71_RS11710 at 2608.863 kb on - strand, within QEN71_RS11710 at 2609.156 kb on + strand, within QEN71_RS11710 at 2609.156 kb on + strand, within QEN71_RS11710 at 2609.157 kb on - strand, within QEN71_RS11710 at 2609.157 kb on - strand, within QEN71_RS11710 at 2609.157 kb on - strand, within QEN71_RS11710 at 2609.157 kb on - strand, within QEN71_RS11710 at 2609.183 kb on + strand, within QEN71_RS11710 at 2609.183 kb on + strand, within QEN71_RS11710 at 2609.183 kb on + strand, within QEN71_RS11710 at 2609.183 kb on + strand, within QEN71_RS11710 at 2609.184 kb on - strand, within QEN71_RS11710 at 2609.184 kb on - strand, within QEN71_RS11710 at 2609.184 kb on - strand, within QEN71_RS11710 at 2609.350 kb on + strand at 2609.351 kb on - strand at 2609.351 kb on - strand at 2609.388 kb on + strand at 2609.388 kb on + strand at 2609.389 kb on - strand at 2609.394 kb on + strand at 2609.395 kb on - strand at 2609.430 kb on - strand at 2609.487 kb on - strand at 2609.487 kb on - strand at 2609.519 kb on + strand at 2609.809 kb on + strand, within QEN71_RS11715 at 2609.809 kb on + strand, within QEN71_RS11715 at 2609.810 kb on - strand, within QEN71_RS11715 at 2609.810 kb on - strand, within QEN71_RS11715 at 2609.970 kb on - strand, within QEN71_RS11715 at 2609.970 kb on - strand, within QEN71_RS11715 at 2610.056 kb on + strand, within QEN71_RS11715 at 2610.056 kb on + strand, within QEN71_RS11715 at 2610.056 kb on + strand, within QEN71_RS11715 at 2610.074 kb on + strand, within QEN71_RS11715 at 2610.074 kb on + strand, within QEN71_RS11715 at 2610.077 kb on + strand, within QEN71_RS11715 at 2610.077 kb on + strand, within QEN71_RS11715 at 2610.077 kb on + strand, within QEN71_RS11715 at 2610.077 kb on + strand, within QEN71_RS11715 at 2610.077 kb on + strand, within QEN71_RS11715 at 2610.077 kb on + strand, within QEN71_RS11715 at 2610.143 kb on + strand, within QEN71_RS11715 at 2610.183 kb on - strand, within QEN71_RS11715
Per-strain Table
Position Strand Gene LocusTag Fraction Motility_inner_sample remove 2,607,519 - QEN71_RS11700 0.87 +0.8 2,607,519 - QEN71_RS11700 0.87 -0.7 2,607,519 - QEN71_RS11700 0.87 -0.5 2,607,519 - QEN71_RS11700 0.87 -0.4 2,607,519 - QEN71_RS11700 0.87 -1.0 2,607,519 - QEN71_RS11700 0.87 +0.8 2,607,621 - -1.4 2,607,679 + +1.6 2,607,680 - -0.4 2,607,680 - -0.1 2,607,680 - +0.2 2,608,108 + QEN71_RS11705 0.53 +0.3 2,608,497 + +0.8 2,608,535 + +0.4 2,608,640 + QEN71_RS11710 0.18 +0.3 2,608,640 + QEN71_RS11710 0.18 +0.6 2,608,640 + QEN71_RS11710 0.18 +0.0 2,608,640 + QEN71_RS11710 0.18 -0.3 2,608,641 - QEN71_RS11710 0.18 -0.3 2,608,641 - QEN71_RS11710 0.18 -1.0 2,608,641 - QEN71_RS11710 0.18 +0.1 2,608,641 - QEN71_RS11710 0.18 -1.3 2,608,862 + QEN71_RS11710 0.43 -1.2 2,608,862 + QEN71_RS11710 0.43 +0.8 2,608,862 + QEN71_RS11710 0.43 +0.9 2,608,862 + QEN71_RS11710 0.43 -0.4 2,608,862 + QEN71_RS11710 0.43 -0.8 2,608,862 + QEN71_RS11710 0.43 -0.2 2,608,863 - QEN71_RS11710 0.43 -0.1 2,608,863 - QEN71_RS11710 0.43 -0.7 2,608,863 - QEN71_RS11710 0.43 -0.1 2,608,863 - QEN71_RS11710 0.43 -0.3 2,608,863 - QEN71_RS11710 0.43 +0.6 2,608,863 - QEN71_RS11710 0.43 +0.6 2,609,156 + QEN71_RS11710 0.76 +1.4 2,609,156 + QEN71_RS11710 0.76 +0.9 2,609,157 - QEN71_RS11710 0.76 -2.3 2,609,157 - QEN71_RS11710 0.76 -0.3 2,609,157 - QEN71_RS11710 0.76 -0.7 2,609,157 - QEN71_RS11710 0.76 +1.3 2,609,183 + QEN71_RS11710 0.79 -0.8 2,609,183 + QEN71_RS11710 0.79 -1.2 2,609,183 + QEN71_RS11710 0.79 +0.1 2,609,183 + QEN71_RS11710 0.79 +1.6 2,609,184 - QEN71_RS11710 0.79 -2.3 2,609,184 - QEN71_RS11710 0.79 -0.3 2,609,184 - QEN71_RS11710 0.79 +0.8 2,609,350 + +0.5 2,609,351 - -0.1 2,609,351 - -0.7 2,609,388 + +0.4 2,609,388 + +0.1 2,609,389 - -0.2 2,609,394 + -0.9 2,609,395 - +0.6 2,609,430 - -0.7 2,609,487 - +0.1 2,609,487 - +1.3 2,609,519 + +1.3 2,609,809 + QEN71_RS11715 0.37 +0.6 2,609,809 + QEN71_RS11715 0.37 -1.1 2,609,810 - QEN71_RS11715 0.37 -0.6 2,609,810 - QEN71_RS11715 0.37 -2.6 2,609,970 - QEN71_RS11715 0.53 -1.8 2,609,970 - QEN71_RS11715 0.53 -0.4 2,610,056 + QEN71_RS11715 0.61 -0.5 2,610,056 + QEN71_RS11715 0.61 -1.3 2,610,056 + QEN71_RS11715 0.61 -1.1 2,610,074 + QEN71_RS11715 0.63 +0.2 2,610,074 + QEN71_RS11715 0.63 -0.7 2,610,077 + QEN71_RS11715 0.63 -1.1 2,610,077 + QEN71_RS11715 0.63 +0.1 2,610,077 + QEN71_RS11715 0.63 +0.2 2,610,077 + QEN71_RS11715 0.63 -0.6 2,610,077 + QEN71_RS11715 0.63 -0.5 2,610,077 + QEN71_RS11715 0.63 -2.0 2,610,143 + QEN71_RS11715 0.69 -0.5 2,610,183 - QEN71_RS11715 0.73 +0.3
Or see this region's nucleotide sequence