Experiment: Motility_inner_sample
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS09600 and QEN71_RS09605 are separated by 18 nucleotides QEN71_RS09605 and QEN71_RS09610 are separated by 25 nucleotides
QEN71_RS09600: QEN71_RS09600 - amidase family protein, at 2,144,654 to 2,146,180
_RS09600
QEN71_RS09605: QEN71_RS09605 - RidA family protein, at 2,146,199 to 2,146,552
_RS09605
QEN71_RS09610: QEN71_RS09610 - FAD-dependent oxidoreductase, at 2,146,578 to 2,147,810
_RS09610
Position (kb)
2146
2147 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2145.386 kb on + strand, within QEN71_RS09600 at 2145.386 kb on + strand, within QEN71_RS09600 at 2145.386 kb on + strand, within QEN71_RS09600 at 2145.386 kb on + strand, within QEN71_RS09600 at 2145.387 kb on - strand, within QEN71_RS09600 at 2145.387 kb on - strand, within QEN71_RS09600 at 2145.387 kb on - strand, within QEN71_RS09600 at 2145.387 kb on - strand, within QEN71_RS09600 at 2145.452 kb on + strand, within QEN71_RS09600 at 2145.541 kb on + strand, within QEN71_RS09600 at 2145.541 kb on + strand, within QEN71_RS09600 at 2145.541 kb on + strand, within QEN71_RS09600 at 2145.542 kb on - strand, within QEN71_RS09600 at 2145.542 kb on - strand, within QEN71_RS09600 at 2145.542 kb on - strand, within QEN71_RS09600 at 2145.635 kb on + strand, within QEN71_RS09600 at 2145.635 kb on + strand, within QEN71_RS09600 at 2145.635 kb on + strand, within QEN71_RS09600 at 2145.635 kb on + strand, within QEN71_RS09600 at 2145.636 kb on - strand, within QEN71_RS09600 at 2145.680 kb on + strand, within QEN71_RS09600 at 2145.680 kb on + strand, within QEN71_RS09600 at 2145.776 kb on + strand, within QEN71_RS09600 at 2145.776 kb on + strand, within QEN71_RS09600 at 2145.776 kb on + strand, within QEN71_RS09600 at 2145.776 kb on + strand, within QEN71_RS09600 at 2145.776 kb on + strand, within QEN71_RS09600 at 2145.776 kb on + strand, within QEN71_RS09600 at 2145.776 kb on + strand, within QEN71_RS09600 at 2145.777 kb on - strand, within QEN71_RS09600 at 2145.777 kb on - strand, within QEN71_RS09600 at 2145.833 kb on + strand, within QEN71_RS09600 at 2145.833 kb on + strand, within QEN71_RS09600 at 2145.834 kb on - strand, within QEN71_RS09600 at 2145.869 kb on + strand, within QEN71_RS09600 at 2145.869 kb on + strand, within QEN71_RS09600 at 2145.869 kb on + strand, within QEN71_RS09600 at 2145.869 kb on + strand, within QEN71_RS09600 at 2145.869 kb on + strand, within QEN71_RS09600 at 2145.869 kb on + strand, within QEN71_RS09600 at 2145.870 kb on - strand, within QEN71_RS09600 at 2145.870 kb on - strand, within QEN71_RS09600 at 2145.870 kb on - strand, within QEN71_RS09600 at 2145.870 kb on - strand, within QEN71_RS09600 at 2145.870 kb on - strand, within QEN71_RS09600 at 2145.872 kb on + strand, within QEN71_RS09600 at 2145.873 kb on - strand, within QEN71_RS09600 at 2145.873 kb on - strand, within QEN71_RS09600 at 2145.873 kb on - strand, within QEN71_RS09600 at 2145.893 kb on + strand, within QEN71_RS09600 at 2145.893 kb on + strand, within QEN71_RS09600 at 2145.893 kb on + strand, within QEN71_RS09600 at 2145.894 kb on - strand, within QEN71_RS09600 at 2145.894 kb on - strand, within QEN71_RS09600 at 2145.894 kb on - strand, within QEN71_RS09600 at 2145.894 kb on - strand, within QEN71_RS09600 at 2145.894 kb on - strand, within QEN71_RS09600 at 2146.271 kb on + strand, within QEN71_RS09605 at 2146.271 kb on + strand, within QEN71_RS09605 at 2146.272 kb on - strand, within QEN71_RS09605 at 2146.272 kb on - strand, within QEN71_RS09605 at 2146.272 kb on - strand, within QEN71_RS09605 at 2146.272 kb on - strand, within QEN71_RS09605 at 2146.272 kb on - strand, within QEN71_RS09605 at 2146.370 kb on - strand, within QEN71_RS09605 at 2146.598 kb on - strand at 2146.737 kb on + strand, within QEN71_RS09610 at 2146.780 kb on - strand, within QEN71_RS09610 at 2146.855 kb on - strand, within QEN71_RS09610 at 2146.903 kb on - strand, within QEN71_RS09610 at 2146.903 kb on - strand, within QEN71_RS09610 at 2147.032 kb on + strand, within QEN71_RS09610 at 2147.032 kb on + strand, within QEN71_RS09610 at 2147.033 kb on - strand, within QEN71_RS09610 at 2147.061 kb on + strand, within QEN71_RS09610 at 2147.074 kb on - strand, within QEN71_RS09610 at 2147.149 kb on - strand, within QEN71_RS09610 at 2147.150 kb on + strand, within QEN71_RS09610 at 2147.151 kb on - strand, within QEN71_RS09610 at 2147.196 kb on + strand, within QEN71_RS09610 at 2147.197 kb on - strand, within QEN71_RS09610 at 2147.197 kb on - strand, within QEN71_RS09610 at 2147.197 kb on - strand, within QEN71_RS09610 at 2147.206 kb on - strand, within QEN71_RS09610 at 2147.389 kb on - strand, within QEN71_RS09610 at 2147.400 kb on + strand, within QEN71_RS09610 at 2147.401 kb on - strand, within QEN71_RS09610 at 2147.401 kb on - strand, within QEN71_RS09610 at 2147.457 kb on + strand, within QEN71_RS09610 at 2147.458 kb on - strand, within QEN71_RS09610 at 2147.458 kb on - strand, within QEN71_RS09610
Per-strain Table
Position Strand Gene LocusTag Fraction Motility_inner_sample remove 2,145,386 + QEN71_RS09600 0.48 +0.6 2,145,386 + QEN71_RS09600 0.48 -0.1 2,145,386 + QEN71_RS09600 0.48 -0.2 2,145,386 + QEN71_RS09600 0.48 -0.3 2,145,387 - QEN71_RS09600 0.48 +0.1 2,145,387 - QEN71_RS09600 0.48 -0.3 2,145,387 - QEN71_RS09600 0.48 +0.8 2,145,387 - QEN71_RS09600 0.48 -0.6 2,145,452 + QEN71_RS09600 0.52 -0.1 2,145,541 + QEN71_RS09600 0.58 +0.2 2,145,541 + QEN71_RS09600 0.58 +0.3 2,145,541 + QEN71_RS09600 0.58 +1.4 2,145,542 - QEN71_RS09600 0.58 -0.1 2,145,542 - QEN71_RS09600 0.58 -2.4 2,145,542 - QEN71_RS09600 0.58 +0.0 2,145,635 + QEN71_RS09600 0.64 +0.1 2,145,635 + QEN71_RS09600 0.64 -0.2 2,145,635 + QEN71_RS09600 0.64 -0.1 2,145,635 + QEN71_RS09600 0.64 +0.6 2,145,636 - QEN71_RS09600 0.64 -1.4 2,145,680 + QEN71_RS09600 0.67 -0.9 2,145,680 + QEN71_RS09600 0.67 -0.1 2,145,776 + QEN71_RS09600 0.73 -0.9 2,145,776 + QEN71_RS09600 0.73 -0.0 2,145,776 + QEN71_RS09600 0.73 +1.5 2,145,776 + QEN71_RS09600 0.73 +0.7 2,145,776 + QEN71_RS09600 0.73 +0.3 2,145,776 + QEN71_RS09600 0.73 -0.5 2,145,776 + QEN71_RS09600 0.73 +1.2 2,145,777 - QEN71_RS09600 0.74 +0.2 2,145,777 - QEN71_RS09600 0.74 -1.0 2,145,833 + QEN71_RS09600 0.77 +0.2 2,145,833 + QEN71_RS09600 0.77 +0.1 2,145,834 - QEN71_RS09600 0.77 -1.4 2,145,869 + QEN71_RS09600 0.80 +2.1 2,145,869 + QEN71_RS09600 0.80 -1.3 2,145,869 + QEN71_RS09600 0.80 +1.3 2,145,869 + QEN71_RS09600 0.80 -0.7 2,145,869 + QEN71_RS09600 0.80 -0.3 2,145,869 + QEN71_RS09600 0.80 +1.6 2,145,870 - QEN71_RS09600 0.80 -0.2 2,145,870 - QEN71_RS09600 0.80 -1.1 2,145,870 - QEN71_RS09600 0.80 +0.0 2,145,870 - QEN71_RS09600 0.80 -0.7 2,145,870 - QEN71_RS09600 0.80 +0.8 2,145,872 + QEN71_RS09600 0.80 -0.2 2,145,873 - QEN71_RS09600 0.80 -1.0 2,145,873 - QEN71_RS09600 0.80 +0.1 2,145,873 - QEN71_RS09600 0.80 +1.3 2,145,893 + QEN71_RS09600 0.81 -0.1 2,145,893 + QEN71_RS09600 0.81 +0.3 2,145,893 + QEN71_RS09600 0.81 -0.6 2,145,894 - QEN71_RS09600 0.81 -0.3 2,145,894 - QEN71_RS09600 0.81 +1.6 2,145,894 - QEN71_RS09600 0.81 -1.2 2,145,894 - QEN71_RS09600 0.81 -0.6 2,145,894 - QEN71_RS09600 0.81 +1.3 2,146,271 + QEN71_RS09605 0.20 -0.5 2,146,271 + QEN71_RS09605 0.20 -0.3 2,146,272 - QEN71_RS09605 0.21 +0.0 2,146,272 - QEN71_RS09605 0.21 +0.4 2,146,272 - QEN71_RS09605 0.21 -0.3 2,146,272 - QEN71_RS09605 0.21 +0.2 2,146,272 - QEN71_RS09605 0.21 -1.1 2,146,370 - QEN71_RS09605 0.48 -1.2 2,146,598 - +0.1 2,146,737 + QEN71_RS09610 0.13 -0.0 2,146,780 - QEN71_RS09610 0.16 +0.4 2,146,855 - QEN71_RS09610 0.22 -0.2 2,146,903 - QEN71_RS09610 0.26 +0.3 2,146,903 - QEN71_RS09610 0.26 -0.7 2,147,032 + QEN71_RS09610 0.37 -0.8 2,147,032 + QEN71_RS09610 0.37 -0.2 2,147,033 - QEN71_RS09610 0.37 -1.9 2,147,061 + QEN71_RS09610 0.39 -0.3 2,147,074 - QEN71_RS09610 0.40 -0.2 2,147,149 - QEN71_RS09610 0.46 +0.1 2,147,150 + QEN71_RS09610 0.46 -1.4 2,147,151 - QEN71_RS09610 0.46 -0.6 2,147,196 + QEN71_RS09610 0.50 -0.6 2,147,197 - QEN71_RS09610 0.50 +0.8 2,147,197 - QEN71_RS09610 0.50 +0.7 2,147,197 - QEN71_RS09610 0.50 -1.5 2,147,206 - QEN71_RS09610 0.51 +0.0 2,147,389 - QEN71_RS09610 0.66 -0.9 2,147,400 + QEN71_RS09610 0.67 +0.2 2,147,401 - QEN71_RS09610 0.67 +1.3 2,147,401 - QEN71_RS09610 0.67 +1.6 2,147,457 + QEN71_RS09610 0.71 -1.4 2,147,458 - QEN71_RS09610 0.71 +0.1 2,147,458 - QEN71_RS09610 0.71 -0.4
Or see this region's nucleotide sequence