Experiment: Motility_inner_sample
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS03400 and QEN71_RS03405 are separated by 247 nucleotides QEN71_RS03405 and QEN71_RS03410 are separated by 13 nucleotides
QEN71_RS03400: QEN71_RS03400 - agmatinase, at 756,607 to 757,599
_RS03400
QEN71_RS03405: QEN71_RS03405 - tetratricopeptide repeat-containing glycosyltransferase family protein, at 757,847 to 759,478
_RS03405
QEN71_RS03410: QEN71_RS03410 - putative hydroxymethylpyrimidine transporter CytX, at 759,492 to 760,808
_RS03410
Position (kb) 757
758
759
760 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 756.847 kb on + strand, within QEN71_RS03400 at 756.847 kb on + strand, within QEN71_RS03400 at 756.847 kb on + strand, within QEN71_RS03400 at 756.847 kb on + strand, within QEN71_RS03400 at 756.847 kb on + strand, within QEN71_RS03400 at 756.847 kb on + strand, within QEN71_RS03400 at 756.847 kb on + strand, within QEN71_RS03400 at 756.848 kb on - strand, within QEN71_RS03400 at 756.848 kb on - strand, within QEN71_RS03400 at 756.922 kb on + strand, within QEN71_RS03400 at 756.922 kb on + strand, within QEN71_RS03400 at 756.922 kb on + strand, within QEN71_RS03400 at 756.922 kb on + strand, within QEN71_RS03400 at 756.922 kb on + strand, within QEN71_RS03400 at 756.922 kb on + strand, within QEN71_RS03400 at 756.923 kb on - strand, within QEN71_RS03400 at 756.923 kb on - strand, within QEN71_RS03400 at 756.923 kb on - strand, within QEN71_RS03400 at 756.923 kb on - strand, within QEN71_RS03400 at 756.923 kb on - strand, within QEN71_RS03400 at 756.925 kb on - strand, within QEN71_RS03400 at 756.925 kb on - strand, within QEN71_RS03400 at 756.961 kb on + strand, within QEN71_RS03400 at 756.961 kb on + strand, within QEN71_RS03400 at 756.961 kb on + strand, within QEN71_RS03400 at 757.054 kb on + strand, within QEN71_RS03400 at 757.054 kb on + strand, within QEN71_RS03400 at 757.054 kb on + strand, within QEN71_RS03400 at 757.055 kb on - strand, within QEN71_RS03400 at 757.213 kb on + strand, within QEN71_RS03400 at 757.213 kb on + strand, within QEN71_RS03400 at 757.214 kb on - strand, within QEN71_RS03400 at 757.342 kb on + strand, within QEN71_RS03400 at 757.342 kb on + strand, within QEN71_RS03400 at 757.343 kb on - strand, within QEN71_RS03400 at 757.343 kb on - strand, within QEN71_RS03400 at 757.343 kb on - strand, within QEN71_RS03400 at 757.343 kb on - strand, within QEN71_RS03400 at 757.464 kb on + strand, within QEN71_RS03400 at 757.464 kb on + strand, within QEN71_RS03400 at 757.501 kb on + strand at 757.501 kb on + strand at 757.597 kb on + strand at 757.597 kb on + strand at 757.598 kb on - strand at 757.643 kb on + strand at 757.644 kb on - strand at 757.644 kb on - strand at 757.644 kb on - strand at 757.653 kb on + strand at 757.701 kb on + strand at 757.718 kb on - strand at 757.718 kb on - strand at 757.748 kb on + strand at 757.792 kb on + strand at 757.792 kb on + strand at 757.821 kb on + strand at 757.821 kb on + strand at 757.821 kb on + strand at 757.821 kb on + strand at 757.821 kb on + strand at 757.821 kb on + strand at 757.822 kb on - strand at 757.822 kb on - strand at 757.822 kb on - strand at 757.822 kb on - strand at 757.822 kb on - strand at 757.822 kb on - strand at 757.822 kb on - strand at 757.822 kb on - strand at 757.824 kb on + strand at 757.824 kb on + strand at 757.824 kb on + strand at 757.824 kb on + strand at 757.824 kb on + strand at 757.824 kb on + strand at 757.824 kb on + strand at 757.825 kb on - strand at 757.825 kb on - strand at 757.825 kb on - strand at 757.825 kb on - strand at 757.825 kb on - strand at 757.825 kb on - strand at 757.850 kb on + strand at 757.850 kb on + strand at 757.851 kb on - strand at 757.851 kb on - strand at 757.889 kb on + strand at 757.890 kb on - strand at 757.910 kb on + strand at 757.910 kb on + strand at 757.911 kb on - strand at 758.045 kb on + strand, within QEN71_RS03405 at 758.045 kb on + strand, within QEN71_RS03405 at 758.046 kb on - strand, within QEN71_RS03405 at 758.046 kb on - strand, within QEN71_RS03405 at 758.046 kb on - strand, within QEN71_RS03405 at 758.046 kb on - strand, within QEN71_RS03405 at 758.046 kb on - strand, within QEN71_RS03405 at 758.078 kb on + strand, within QEN71_RS03405 at 758.170 kb on + strand, within QEN71_RS03405 at 758.170 kb on + strand, within QEN71_RS03405 at 758.171 kb on - strand, within QEN71_RS03405 at 758.192 kb on + strand, within QEN71_RS03405 at 758.192 kb on + strand, within QEN71_RS03405 at 758.193 kb on - strand, within QEN71_RS03405 at 758.193 kb on - strand, within QEN71_RS03405 at 758.213 kb on + strand, within QEN71_RS03405 at 758.213 kb on + strand, within QEN71_RS03405 at 758.213 kb on + strand, within QEN71_RS03405 at 758.253 kb on - strand, within QEN71_RS03405 at 758.315 kb on + strand, within QEN71_RS03405 at 758.315 kb on + strand, within QEN71_RS03405 at 758.316 kb on - strand, within QEN71_RS03405 at 758.316 kb on - strand, within QEN71_RS03405 at 758.354 kb on + strand, within QEN71_RS03405 at 758.354 kb on + strand, within QEN71_RS03405 at 758.354 kb on + strand, within QEN71_RS03405 at 758.354 kb on + strand, within QEN71_RS03405 at 758.355 kb on - strand, within QEN71_RS03405 at 758.355 kb on - strand, within QEN71_RS03405 at 758.355 kb on - strand, within QEN71_RS03405 at 758.355 kb on - strand, within QEN71_RS03405 at 758.356 kb on + strand, within QEN71_RS03405 at 758.356 kb on + strand, within QEN71_RS03405 at 758.357 kb on - strand, within QEN71_RS03405 at 758.357 kb on - strand, within QEN71_RS03405 at 758.457 kb on - strand, within QEN71_RS03405 at 758.486 kb on + strand, within QEN71_RS03405 at 758.486 kb on + strand, within QEN71_RS03405 at 758.487 kb on - strand, within QEN71_RS03405 at 758.487 kb on - strand, within QEN71_RS03405 at 758.487 kb on - strand, within QEN71_RS03405 at 758.708 kb on + strand, within QEN71_RS03405 at 758.730 kb on + strand, within QEN71_RS03405 at 758.730 kb on + strand, within QEN71_RS03405 at 758.731 kb on - strand, within QEN71_RS03405 at 758.849 kb on + strand, within QEN71_RS03405 at 758.849 kb on + strand, within QEN71_RS03405 at 758.849 kb on + strand, within QEN71_RS03405 at 758.849 kb on + strand, within QEN71_RS03405 at 758.850 kb on - strand, within QEN71_RS03405 at 758.850 kb on - strand, within QEN71_RS03405 at 758.850 kb on - strand, within QEN71_RS03405 at 758.850 kb on - strand, within QEN71_RS03405 at 758.850 kb on - strand, within QEN71_RS03405 at 758.850 kb on - strand, within QEN71_RS03405 at 758.850 kb on - strand, within QEN71_RS03405 at 758.850 kb on - strand, within QEN71_RS03405 at 758.924 kb on + strand, within QEN71_RS03405 at 758.924 kb on + strand, within QEN71_RS03405 at 758.945 kb on + strand, within QEN71_RS03405 at 758.946 kb on - strand, within QEN71_RS03405 at 758.991 kb on + strand, within QEN71_RS03405 at 758.991 kb on + strand, within QEN71_RS03405 at 758.991 kb on + strand, within QEN71_RS03405 at 758.991 kb on + strand, within QEN71_RS03405 at 758.991 kb on + strand, within QEN71_RS03405 at 758.991 kb on + strand, within QEN71_RS03405 at 758.992 kb on - strand, within QEN71_RS03405 at 758.992 kb on - strand, within QEN71_RS03405 at 759.077 kb on + strand, within QEN71_RS03405 at 759.077 kb on + strand, within QEN71_RS03405 at 759.078 kb on - strand, within QEN71_RS03405 at 759.237 kb on + strand, within QEN71_RS03405 at 759.238 kb on - strand, within QEN71_RS03405 at 759.238 kb on - strand, within QEN71_RS03405 at 759.238 kb on - strand, within QEN71_RS03405 at 759.238 kb on - strand, within QEN71_RS03405 at 759.238 kb on - strand, within QEN71_RS03405 at 759.238 kb on - strand, within QEN71_RS03405 at 759.238 kb on - strand, within QEN71_RS03405 at 759.238 kb on - strand, within QEN71_RS03405 at 759.238 kb on - strand, within QEN71_RS03405 at 759.238 kb on - strand, within QEN71_RS03405 at 759.259 kb on + strand, within QEN71_RS03405 at 759.259 kb on + strand, within QEN71_RS03405 at 759.259 kb on + strand, within QEN71_RS03405 at 759.260 kb on - strand, within QEN71_RS03405 at 759.260 kb on - strand, within QEN71_RS03405 at 759.260 kb on - strand, within QEN71_RS03405 at 759.260 kb on - strand, within QEN71_RS03405 at 759.260 kb on - strand, within QEN71_RS03405 at 759.260 kb on - strand, within QEN71_RS03405 at 759.260 kb on - strand, within QEN71_RS03405 at 759.260 kb on - strand, within QEN71_RS03405 at 759.317 kb on + strand at 759.499 kb on + strand at 759.499 kb on + strand at 759.500 kb on - strand at 759.500 kb on - strand at 759.500 kb on - strand at 759.500 kb on - strand at 759.500 kb on - strand at 759.500 kb on - strand at 759.500 kb on - strand at 759.500 kb on - strand at 759.532 kb on + strand at 759.532 kb on + strand at 759.533 kb on - strand at 759.533 kb on - strand at 759.533 kb on - strand at 759.533 kb on - strand at 759.533 kb on - strand at 759.605 kb on - strand at 759.681 kb on - strand, within QEN71_RS03410 at 759.793 kb on + strand, within QEN71_RS03410 at 759.793 kb on + strand, within QEN71_RS03410 at 759.793 kb on + strand, within QEN71_RS03410 at 759.793 kb on + strand, within QEN71_RS03410 at 759.794 kb on - strand, within QEN71_RS03410 at 760.028 kb on - strand, within QEN71_RS03410 at 760.028 kb on - strand, within QEN71_RS03410 at 760.045 kb on + strand, within QEN71_RS03410 at 760.045 kb on + strand, within QEN71_RS03410 at 760.046 kb on - strand, within QEN71_RS03410 at 760.046 kb on - strand, within QEN71_RS03410 at 760.055 kb on + strand, within QEN71_RS03410 at 760.056 kb on - strand, within QEN71_RS03410 at 760.056 kb on - strand, within QEN71_RS03410 at 760.123 kb on + strand, within QEN71_RS03410 at 760.123 kb on + strand, within QEN71_RS03410 at 760.124 kb on - strand, within QEN71_RS03410 at 760.252 kb on + strand, within QEN71_RS03410 at 760.252 kb on + strand, within QEN71_RS03410 at 760.253 kb on - strand, within QEN71_RS03410 at 760.253 kb on - strand, within QEN71_RS03410 at 760.253 kb on - strand, within QEN71_RS03410 at 760.253 kb on - strand, within QEN71_RS03410 at 760.253 kb on - strand, within QEN71_RS03410 at 760.253 kb on - strand, within QEN71_RS03410
Per-strain Table
Position Strand Gene LocusTag Fraction Motility_inner_sample remove 756,847 + QEN71_RS03400 0.24 +0.6 756,847 + QEN71_RS03400 0.24 -0.3 756,847 + QEN71_RS03400 0.24 -0.6 756,847 + QEN71_RS03400 0.24 +1.0 756,847 + QEN71_RS03400 0.24 +0.1 756,847 + QEN71_RS03400 0.24 +1.8 756,847 + QEN71_RS03400 0.24 -0.2 756,848 - QEN71_RS03400 0.24 -0.3 756,848 - QEN71_RS03400 0.24 +0.3 756,922 + QEN71_RS03400 0.32 +0.1 756,922 + QEN71_RS03400 0.32 -0.3 756,922 + QEN71_RS03400 0.32 +1.7 756,922 + QEN71_RS03400 0.32 +0.3 756,922 + QEN71_RS03400 0.32 -0.2 756,922 + QEN71_RS03400 0.32 -0.3 756,923 - QEN71_RS03400 0.32 +0.2 756,923 - QEN71_RS03400 0.32 +0.1 756,923 - QEN71_RS03400 0.32 -1.0 756,923 - QEN71_RS03400 0.32 -0.9 756,923 - QEN71_RS03400 0.32 +0.6 756,925 - QEN71_RS03400 0.32 +0.3 756,925 - QEN71_RS03400 0.32 +0.5 756,961 + QEN71_RS03400 0.36 -2.1 756,961 + QEN71_RS03400 0.36 -1.0 756,961 + QEN71_RS03400 0.36 +1.8 757,054 + QEN71_RS03400 0.45 +0.8 757,054 + QEN71_RS03400 0.45 -0.4 757,054 + QEN71_RS03400 0.45 +0.2 757,055 - QEN71_RS03400 0.45 -0.3 757,213 + QEN71_RS03400 0.61 -0.2 757,213 + QEN71_RS03400 0.61 -0.6 757,214 - QEN71_RS03400 0.61 -0.4 757,342 + QEN71_RS03400 0.74 -0.3 757,342 + QEN71_RS03400 0.74 -0.9 757,343 - QEN71_RS03400 0.74 -2.8 757,343 - QEN71_RS03400 0.74 -0.2 757,343 - QEN71_RS03400 0.74 +0.8 757,343 - QEN71_RS03400 0.74 +0.8 757,464 + QEN71_RS03400 0.86 -1.5 757,464 + QEN71_RS03400 0.86 +0.4 757,501 + +0.4 757,501 + -0.1 757,597 + +0.4 757,597 + +0.8 757,598 - -1.6 757,643 + -0.7 757,644 - +0.0 757,644 - -1.2 757,644 - -1.2 757,653 + +0.5 757,701 + +0.9 757,718 - +1.8 757,718 - -1.3 757,748 + +1.5 757,792 + -0.2 757,792 + +0.1 757,821 + +0.4 757,821 + +0.4 757,821 + +0.5 757,821 + +0.8 757,821 + +1.8 757,821 + +0.6 757,822 - -1.3 757,822 - -0.8 757,822 - +0.7 757,822 - +0.0 757,822 - -0.6 757,822 - -0.1 757,822 - -0.8 757,822 - -0.2 757,824 + -1.3 757,824 + -0.4 757,824 + +0.2 757,824 + +0.5 757,824 + -1.6 757,824 + +0.3 757,824 + +1.0 757,825 - +0.8 757,825 - +0.0 757,825 - -0.3 757,825 - -0.2 757,825 - -1.0 757,825 - -0.2 757,850 + +0.2 757,850 + -2.2 757,851 - -1.1 757,851 - +0.1 757,889 + +0.2 757,890 - +2.1 757,910 + +0.4 757,910 + +2.3 757,911 - -1.3 758,045 + QEN71_RS03405 0.12 +0.1 758,045 + QEN71_RS03405 0.12 -0.7 758,046 - QEN71_RS03405 0.12 +0.4 758,046 - QEN71_RS03405 0.12 +1.9 758,046 - QEN71_RS03405 0.12 +0.1 758,046 - QEN71_RS03405 0.12 +1.2 758,046 - QEN71_RS03405 0.12 +0.1 758,078 + QEN71_RS03405 0.14 +0.2 758,170 + QEN71_RS03405 0.20 -0.1 758,170 + QEN71_RS03405 0.20 -2.3 758,171 - QEN71_RS03405 0.20 +0.0 758,192 + QEN71_RS03405 0.21 -0.3 758,192 + QEN71_RS03405 0.21 -0.4 758,193 - QEN71_RS03405 0.21 +2.1 758,193 - QEN71_RS03405 0.21 -0.2 758,213 + QEN71_RS03405 0.22 +2.0 758,213 + QEN71_RS03405 0.22 +1.1 758,213 + QEN71_RS03405 0.22 -1.7 758,253 - QEN71_RS03405 0.25 -0.2 758,315 + QEN71_RS03405 0.29 +1.3 758,315 + QEN71_RS03405 0.29 +0.6 758,316 - QEN71_RS03405 0.29 -1.1 758,316 - QEN71_RS03405 0.29 +1.0 758,354 + QEN71_RS03405 0.31 -1.6 758,354 + QEN71_RS03405 0.31 -1.3 758,354 + QEN71_RS03405 0.31 -0.6 758,354 + QEN71_RS03405 0.31 +0.4 758,355 - QEN71_RS03405 0.31 -1.6 758,355 - QEN71_RS03405 0.31 +1.8 758,355 - QEN71_RS03405 0.31 -1.4 758,355 - QEN71_RS03405 0.31 +1.3 758,356 + QEN71_RS03405 0.31 -1.4 758,356 + QEN71_RS03405 0.31 +0.5 758,357 - QEN71_RS03405 0.31 +0.6 758,357 - QEN71_RS03405 0.31 -0.6 758,457 - QEN71_RS03405 0.37 -0.7 758,486 + QEN71_RS03405 0.39 -1.5 758,486 + QEN71_RS03405 0.39 -0.3 758,487 - QEN71_RS03405 0.39 +0.9 758,487 - QEN71_RS03405 0.39 +0.9 758,487 - QEN71_RS03405 0.39 -0.0 758,708 + QEN71_RS03405 0.53 +0.7 758,730 + QEN71_RS03405 0.54 -0.1 758,730 + QEN71_RS03405 0.54 -1.1 758,731 - QEN71_RS03405 0.54 +0.0 758,849 + QEN71_RS03405 0.61 +0.3 758,849 + QEN71_RS03405 0.61 -0.6 758,849 + QEN71_RS03405 0.61 +0.8 758,849 + QEN71_RS03405 0.61 +0.4 758,850 - QEN71_RS03405 0.61 -0.0 758,850 - QEN71_RS03405 0.61 -1.7 758,850 - QEN71_RS03405 0.61 +0.1 758,850 - QEN71_RS03405 0.61 +0.5 758,850 - QEN71_RS03405 0.61 -0.3 758,850 - QEN71_RS03405 0.61 +0.3 758,850 - QEN71_RS03405 0.61 -0.2 758,850 - QEN71_RS03405 0.61 +0.3 758,924 + QEN71_RS03405 0.66 -0.4 758,924 + QEN71_RS03405 0.66 +0.1 758,945 + QEN71_RS03405 0.67 -0.7 758,946 - QEN71_RS03405 0.67 -1.5 758,991 + QEN71_RS03405 0.70 +0.4 758,991 + QEN71_RS03405 0.70 -0.6 758,991 + QEN71_RS03405 0.70 -0.1 758,991 + QEN71_RS03405 0.70 +0.6 758,991 + QEN71_RS03405 0.70 -0.7 758,991 + QEN71_RS03405 0.70 +1.2 758,992 - QEN71_RS03405 0.70 +1.2 758,992 - QEN71_RS03405 0.70 +1.8 759,077 + QEN71_RS03405 0.75 -0.8 759,077 + QEN71_RS03405 0.75 +0.5 759,078 - QEN71_RS03405 0.75 -1.1 759,237 + QEN71_RS03405 0.85 -0.5 759,238 - QEN71_RS03405 0.85 -2.5 759,238 - QEN71_RS03405 0.85 +1.0 759,238 - QEN71_RS03405 0.85 +0.2 759,238 - QEN71_RS03405 0.85 +0.3 759,238 - QEN71_RS03405 0.85 +1.2 759,238 - QEN71_RS03405 0.85 -1.0 759,238 - QEN71_RS03405 0.85 +1.4 759,238 - QEN71_RS03405 0.85 +0.3 759,238 - QEN71_RS03405 0.85 +0.5 759,238 - QEN71_RS03405 0.85 +1.6 759,259 + QEN71_RS03405 0.87 +0.1 759,259 + QEN71_RS03405 0.87 +1.0 759,259 + QEN71_RS03405 0.87 -1.4 759,260 - QEN71_RS03405 0.87 -1.7 759,260 - QEN71_RS03405 0.87 -0.3 759,260 - QEN71_RS03405 0.87 -0.8 759,260 - QEN71_RS03405 0.87 +0.8 759,260 - QEN71_RS03405 0.87 +2.8 759,260 - QEN71_RS03405 0.87 +1.0 759,260 - QEN71_RS03405 0.87 +0.8 759,260 - QEN71_RS03405 0.87 +0.2 759,317 + -1.0 759,499 + -0.1 759,499 + +0.5 759,500 - -0.7 759,500 - +0.4 759,500 - +1.3 759,500 - -0.3 759,500 - +0.6 759,500 - -2.3 759,500 - -0.7 759,500 - +0.3 759,532 + +0.3 759,532 + -0.6 759,533 - +0.9 759,533 - -0.2 759,533 - -1.1 759,533 - +0.9 759,533 - -0.6 759,605 - +0.2 759,681 - QEN71_RS03410 0.14 +0.8 759,793 + QEN71_RS03410 0.23 -0.9 759,793 + QEN71_RS03410 0.23 +1.8 759,793 + QEN71_RS03410 0.23 -1.6 759,793 + QEN71_RS03410 0.23 -1.0 759,794 - QEN71_RS03410 0.23 -1.2 760,028 - QEN71_RS03410 0.41 -0.9 760,028 - QEN71_RS03410 0.41 +0.3 760,045 + QEN71_RS03410 0.42 -0.9 760,045 + QEN71_RS03410 0.42 -0.7 760,046 - QEN71_RS03410 0.42 +0.2 760,046 - QEN71_RS03410 0.42 +0.8 760,055 + QEN71_RS03410 0.43 +0.2 760,056 - QEN71_RS03410 0.43 +3.1 760,056 - QEN71_RS03410 0.43 +1.4 760,123 + QEN71_RS03410 0.48 +0.0 760,123 + QEN71_RS03410 0.48 +0.2 760,124 - QEN71_RS03410 0.48 -0.2 760,252 + QEN71_RS03410 0.58 -0.5 760,252 + QEN71_RS03410 0.58 -1.1 760,253 - QEN71_RS03410 0.58 +0.0 760,253 - QEN71_RS03410 0.58 -1.0 760,253 - QEN71_RS03410 0.58 -0.1 760,253 - QEN71_RS03410 0.58 +0.1 760,253 - QEN71_RS03410 0.58 +1.3 760,253 - QEN71_RS03410 0.58 +1.9
Or see this region's nucleotide sequence