Experiment: Motility_inner_sample
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS35900 and QEN71_RS35905 are separated by 89 nucleotides QEN71_RS35905 and QEN71_RS35910 are separated by 389 nucleotides
QEN71_RS35900: QEN71_RS35900 - MFS transporter, at 1,434,832 to 1,436,154
_RS35900
QEN71_RS35905: QEN71_RS35905 - ribokinase, at 1,436,244 to 1,437,182
_RS35905
QEN71_RS35910: QEN71_RS35910 - LacI family DNA-binding transcriptional regulator, at 1,437,572 to 1,438,651
_RS35910
Position (kb)
1436
1437
1438 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1435.347 kb on + strand, within QEN71_RS35900 at 1435.347 kb on + strand, within QEN71_RS35900 at 1435.347 kb on + strand, within QEN71_RS35900 at 1435.347 kb on + strand, within QEN71_RS35900 at 1435.348 kb on - strand, within QEN71_RS35900 at 1435.367 kb on + strand, within QEN71_RS35900 at 1435.389 kb on - strand, within QEN71_RS35900 at 1435.389 kb on - strand, within QEN71_RS35900 at 1435.527 kb on - strand, within QEN71_RS35900 at 1435.571 kb on + strand, within QEN71_RS35900 at 1435.572 kb on - strand, within QEN71_RS35900 at 1435.841 kb on - strand, within QEN71_RS35900 at 1435.895 kb on - strand, within QEN71_RS35900 at 1435.952 kb on + strand, within QEN71_RS35900 at 1435.952 kb on + strand, within QEN71_RS35900 at 1435.952 kb on + strand, within QEN71_RS35900 at 1435.953 kb on - strand, within QEN71_RS35900 at 1435.953 kb on - strand, within QEN71_RS35900 at 1435.953 kb on - strand, within QEN71_RS35900 at 1435.953 kb on - strand, within QEN71_RS35900 at 1435.953 kb on - strand, within QEN71_RS35900 at 1436.058 kb on - strand at 1436.058 kb on - strand at 1436.089 kb on - strand at 1436.176 kb on + strand at 1436.177 kb on - strand at 1436.211 kb on - strand at 1436.458 kb on + strand, within QEN71_RS35905 at 1436.458 kb on + strand, within QEN71_RS35905 at 1436.459 kb on - strand, within QEN71_RS35905 at 1436.459 kb on - strand, within QEN71_RS35905 at 1436.459 kb on - strand, within QEN71_RS35905 at 1436.627 kb on - strand, within QEN71_RS35905 at 1436.909 kb on + strand, within QEN71_RS35905 at 1436.909 kb on + strand, within QEN71_RS35905 at 1436.909 kb on + strand, within QEN71_RS35905 at 1436.909 kb on + strand, within QEN71_RS35905 at 1436.909 kb on + strand, within QEN71_RS35905 at 1436.909 kb on + strand, within QEN71_RS35905 at 1436.909 kb on + strand, within QEN71_RS35905 at 1436.910 kb on - strand, within QEN71_RS35905 at 1436.943 kb on + strand, within QEN71_RS35905 at 1436.943 kb on + strand, within QEN71_RS35905 at 1436.943 kb on + strand, within QEN71_RS35905 at 1436.943 kb on + strand, within QEN71_RS35905 at 1436.944 kb on - strand, within QEN71_RS35905 at 1437.132 kb on - strand at 1437.132 kb on - strand at 1437.278 kb on + strand at 1437.310 kb on + strand at 1437.310 kb on + strand at 1437.310 kb on + strand at 1437.310 kb on + strand at 1437.310 kb on + strand at 1437.310 kb on + strand at 1437.310 kb on + strand at 1437.311 kb on - strand at 1437.311 kb on - strand at 1437.311 kb on - strand at 1437.311 kb on - strand at 1437.311 kb on - strand at 1437.311 kb on - strand at 1437.413 kb on - strand at 1437.413 kb on - strand at 1437.413 kb on - strand at 1437.503 kb on - strand at 1437.512 kb on + strand at 1437.512 kb on + strand at 1437.513 kb on - strand at 1437.513 kb on - strand at 1437.513 kb on - strand at 1437.685 kb on + strand, within QEN71_RS35910 at 1437.685 kb on + strand, within QEN71_RS35910 at 1437.685 kb on + strand, within QEN71_RS35910 at 1437.686 kb on - strand, within QEN71_RS35910 at 1437.686 kb on - strand, within QEN71_RS35910 at 1437.686 kb on - strand, within QEN71_RS35910 at 1437.691 kb on - strand, within QEN71_RS35910 at 1437.701 kb on + strand, within QEN71_RS35910 at 1437.701 kb on + strand, within QEN71_RS35910 at 1437.701 kb on + strand, within QEN71_RS35910 at 1437.702 kb on - strand, within QEN71_RS35910 at 1437.702 kb on - strand, within QEN71_RS35910 at 1437.855 kb on + strand, within QEN71_RS35910 at 1437.932 kb on + strand, within QEN71_RS35910 at 1437.933 kb on - strand, within QEN71_RS35910 at 1438.054 kb on - strand, within QEN71_RS35910 at 1438.058 kb on + strand, within QEN71_RS35910 at 1438.058 kb on + strand, within QEN71_RS35910 at 1438.058 kb on + strand, within QEN71_RS35910 at 1438.058 kb on + strand, within QEN71_RS35910 at 1438.058 kb on + strand, within QEN71_RS35910 at 1438.058 kb on + strand, within QEN71_RS35910 at 1438.067 kb on - strand, within QEN71_RS35910 at 1438.070 kb on + strand, within QEN71_RS35910 at 1438.070 kb on + strand, within QEN71_RS35910 at 1438.070 kb on + strand, within QEN71_RS35910 at 1438.071 kb on - strand, within QEN71_RS35910 at 1438.071 kb on - strand, within QEN71_RS35910 at 1438.071 kb on - strand, within QEN71_RS35910 at 1438.071 kb on - strand, within QEN71_RS35910 at 1438.071 kb on - strand, within QEN71_RS35910 at 1438.127 kb on + strand, within QEN71_RS35910 at 1438.127 kb on + strand, within QEN71_RS35910 at 1438.127 kb on + strand, within QEN71_RS35910 at 1438.128 kb on - strand, within QEN71_RS35910 at 1438.128 kb on - strand, within QEN71_RS35910
Per-strain Table
Position Strand Gene LocusTag Fraction Motility_inner_sample remove 1,435,347 + QEN71_RS35900 0.39 +1.2 1,435,347 + QEN71_RS35900 0.39 -0.3 1,435,347 + QEN71_RS35900 0.39 +0.5 1,435,347 + QEN71_RS35900 0.39 -0.2 1,435,348 - QEN71_RS35900 0.39 -0.5 1,435,367 + QEN71_RS35900 0.40 +1.7 1,435,389 - QEN71_RS35900 0.42 -0.1 1,435,389 - QEN71_RS35900 0.42 +1.4 1,435,527 - QEN71_RS35900 0.53 -1.1 1,435,571 + QEN71_RS35900 0.56 +0.5 1,435,572 - QEN71_RS35900 0.56 +0.1 1,435,841 - QEN71_RS35900 0.76 -1.2 1,435,895 - QEN71_RS35900 0.80 +2.9 1,435,952 + QEN71_RS35900 0.85 +0.3 1,435,952 + QEN71_RS35900 0.85 +1.1 1,435,952 + QEN71_RS35900 0.85 -0.9 1,435,953 - QEN71_RS35900 0.85 +1.2 1,435,953 - QEN71_RS35900 0.85 -1.1 1,435,953 - QEN71_RS35900 0.85 +0.7 1,435,953 - QEN71_RS35900 0.85 -0.5 1,435,953 - QEN71_RS35900 0.85 -0.6 1,436,058 - +0.1 1,436,058 - -0.9 1,436,089 - +0.1 1,436,176 + +1.1 1,436,177 - -3.4 1,436,211 - +0.9 1,436,458 + QEN71_RS35905 0.23 -0.4 1,436,458 + QEN71_RS35905 0.23 +0.7 1,436,459 - QEN71_RS35905 0.23 -0.3 1,436,459 - QEN71_RS35905 0.23 -0.3 1,436,459 - QEN71_RS35905 0.23 +0.7 1,436,627 - QEN71_RS35905 0.41 +1.2 1,436,909 + QEN71_RS35905 0.71 -0.4 1,436,909 + QEN71_RS35905 0.71 +0.2 1,436,909 + QEN71_RS35905 0.71 -0.0 1,436,909 + QEN71_RS35905 0.71 -0.8 1,436,909 + QEN71_RS35905 0.71 -1.3 1,436,909 + QEN71_RS35905 0.71 +1.2 1,436,909 + QEN71_RS35905 0.71 +2.3 1,436,910 - QEN71_RS35905 0.71 -0.7 1,436,943 + QEN71_RS35905 0.74 -0.1 1,436,943 + QEN71_RS35905 0.74 -1.2 1,436,943 + QEN71_RS35905 0.74 -1.0 1,436,943 + QEN71_RS35905 0.74 +0.3 1,436,944 - QEN71_RS35905 0.75 -0.5 1,437,132 - -0.9 1,437,132 - -0.3 1,437,278 + -0.1 1,437,310 + +0.7 1,437,310 + +0.7 1,437,310 + -0.6 1,437,310 + +1.2 1,437,310 + -0.7 1,437,310 + +0.2 1,437,310 + +1.6 1,437,311 - -1.0 1,437,311 - -0.4 1,437,311 - -1.0 1,437,311 - +0.9 1,437,311 - -0.2 1,437,311 - +0.3 1,437,413 - +1.1 1,437,413 - -0.7 1,437,413 - +1.4 1,437,503 - -1.5 1,437,512 + -0.9 1,437,512 + -0.7 1,437,513 - -0.1 1,437,513 - -0.0 1,437,513 - -0.5 1,437,685 + QEN71_RS35910 0.10 +0.3 1,437,685 + QEN71_RS35910 0.10 -0.5 1,437,685 + QEN71_RS35910 0.10 +0.5 1,437,686 - QEN71_RS35910 0.11 +0.5 1,437,686 - QEN71_RS35910 0.11 +0.6 1,437,686 - QEN71_RS35910 0.11 -1.0 1,437,691 - QEN71_RS35910 0.11 +0.3 1,437,701 + QEN71_RS35910 0.12 -0.8 1,437,701 + QEN71_RS35910 0.12 -1.0 1,437,701 + QEN71_RS35910 0.12 +0.6 1,437,702 - QEN71_RS35910 0.12 -0.8 1,437,702 - QEN71_RS35910 0.12 -0.3 1,437,855 + QEN71_RS35910 0.26 +0.1 1,437,932 + QEN71_RS35910 0.33 -1.9 1,437,933 - QEN71_RS35910 0.33 +0.2 1,438,054 - QEN71_RS35910 0.45 -2.4 1,438,058 + QEN71_RS35910 0.45 -1.4 1,438,058 + QEN71_RS35910 0.45 -0.5 1,438,058 + QEN71_RS35910 0.45 +0.3 1,438,058 + QEN71_RS35910 0.45 -0.3 1,438,058 + QEN71_RS35910 0.45 -0.3 1,438,058 + QEN71_RS35910 0.45 +0.4 1,438,067 - QEN71_RS35910 0.46 -0.2 1,438,070 + QEN71_RS35910 0.46 +0.8 1,438,070 + QEN71_RS35910 0.46 -0.7 1,438,070 + QEN71_RS35910 0.46 +0.3 1,438,071 - QEN71_RS35910 0.46 -0.0 1,438,071 - QEN71_RS35910 0.46 +0.9 1,438,071 - QEN71_RS35910 0.46 -1.4 1,438,071 - QEN71_RS35910 0.46 +0.5 1,438,071 - QEN71_RS35910 0.46 -1.5 1,438,127 + QEN71_RS35910 0.51 +0.4 1,438,127 + QEN71_RS35910 0.51 -0.7 1,438,127 + QEN71_RS35910 0.51 +0.3 1,438,128 - QEN71_RS35910 0.51 +0.5 1,438,128 - QEN71_RS35910 0.51 +0.9
Or see this region's nucleotide sequence