Experiment: Motility_inner_sample
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS10165 and QEN71_RS10170 are separated by 4 nucleotides QEN71_RS10170 and QEN71_RS10175 are separated by 100 nucleotides
QEN71_RS10165: QEN71_RS10165 - DMT family transporter, at 2,265,436 to 2,266,356
_RS10165
QEN71_RS10170: QEN71_RS10170 - Fe2+-dependent dioxygenase, at 2,266,361 to 2,267,044
_RS10170
QEN71_RS10175: QEN71_RS10175 - TonB-dependent siderophore receptor, at 2,267,145 to 2,269,382
_RS10175
Position (kb)
2266
2267
2268 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2265.669 kb on - strand, within QEN71_RS10165 at 2265.673 kb on + strand, within QEN71_RS10165 at 2265.674 kb on - strand, within QEN71_RS10165 at 2265.674 kb on - strand, within QEN71_RS10165 at 2265.895 kb on + strand, within QEN71_RS10165 at 2265.895 kb on + strand, within QEN71_RS10165 at 2265.896 kb on - strand, within QEN71_RS10165 at 2265.896 kb on - strand, within QEN71_RS10165 at 2265.896 kb on - strand, within QEN71_RS10165 at 2266.123 kb on + strand, within QEN71_RS10165 at 2266.124 kb on - strand, within QEN71_RS10165 at 2266.124 kb on - strand, within QEN71_RS10165 at 2266.132 kb on + strand, within QEN71_RS10165 at 2266.135 kb on + strand, within QEN71_RS10165 at 2266.136 kb on - strand, within QEN71_RS10165 at 2266.136 kb on - strand, within QEN71_RS10165 at 2266.183 kb on + strand, within QEN71_RS10165 at 2266.183 kb on + strand, within QEN71_RS10165 at 2266.183 kb on + strand, within QEN71_RS10165 at 2266.362 kb on + strand at 2266.362 kb on + strand at 2266.362 kb on + strand at 2266.363 kb on - strand at 2266.363 kb on - strand at 2266.396 kb on - strand at 2266.630 kb on - strand, within QEN71_RS10170 at 2266.630 kb on - strand, within QEN71_RS10170 at 2266.630 kb on - strand, within QEN71_RS10170 at 2266.630 kb on - strand, within QEN71_RS10170 at 2266.634 kb on - strand, within QEN71_RS10170 at 2266.783 kb on - strand, within QEN71_RS10170 at 2266.804 kb on - strand, within QEN71_RS10170 at 2267.022 kb on - strand at 2267.158 kb on + strand at 2267.233 kb on + strand at 2267.278 kb on + strand at 2267.371 kb on + strand, within QEN71_RS10175 at 2267.371 kb on + strand, within QEN71_RS10175 at 2267.371 kb on + strand, within QEN71_RS10175 at 2267.371 kb on + strand, within QEN71_RS10175 at 2267.413 kb on + strand, within QEN71_RS10175 at 2267.413 kb on + strand, within QEN71_RS10175 at 2267.414 kb on - strand, within QEN71_RS10175 at 2267.414 kb on - strand, within QEN71_RS10175 at 2267.414 kb on - strand, within QEN71_RS10175 at 2267.414 kb on - strand, within QEN71_RS10175 at 2267.414 kb on - strand, within QEN71_RS10175 at 2267.435 kb on + strand, within QEN71_RS10175 at 2267.435 kb on + strand, within QEN71_RS10175 at 2267.435 kb on + strand, within QEN71_RS10175 at 2267.436 kb on - strand, within QEN71_RS10175 at 2267.506 kb on + strand, within QEN71_RS10175 at 2267.506 kb on + strand, within QEN71_RS10175 at 2267.506 kb on + strand, within QEN71_RS10175 at 2267.506 kb on + strand, within QEN71_RS10175 at 2267.507 kb on - strand, within QEN71_RS10175 at 2267.507 kb on - strand, within QEN71_RS10175 at 2267.507 kb on - strand, within QEN71_RS10175 at 2267.507 kb on - strand, within QEN71_RS10175 at 2267.507 kb on - strand, within QEN71_RS10175 at 2267.510 kb on + strand, within QEN71_RS10175 at 2267.510 kb on + strand, within QEN71_RS10175 at 2267.510 kb on + strand, within QEN71_RS10175 at 2267.511 kb on - strand, within QEN71_RS10175 at 2267.511 kb on - strand, within QEN71_RS10175 at 2267.600 kb on - strand, within QEN71_RS10175 at 2267.717 kb on + strand, within QEN71_RS10175 at 2267.717 kb on + strand, within QEN71_RS10175 at 2267.717 kb on + strand, within QEN71_RS10175 at 2267.717 kb on + strand, within QEN71_RS10175 at 2267.718 kb on - strand, within QEN71_RS10175 at 2267.791 kb on + strand, within QEN71_RS10175 at 2267.791 kb on + strand, within QEN71_RS10175 at 2267.801 kb on - strand, within QEN71_RS10175 at 2267.801 kb on - strand, within QEN71_RS10175 at 2267.827 kb on + strand, within QEN71_RS10175 at 2267.827 kb on + strand, within QEN71_RS10175 at 2267.828 kb on - strand, within QEN71_RS10175 at 2267.858 kb on - strand, within QEN71_RS10175 at 2267.858 kb on - strand, within QEN71_RS10175 at 2267.914 kb on + strand, within QEN71_RS10175 at 2267.915 kb on - strand, within QEN71_RS10175 at 2267.980 kb on + strand, within QEN71_RS10175 at 2267.980 kb on + strand, within QEN71_RS10175 at 2267.981 kb on - strand, within QEN71_RS10175
Per-strain Table
Position Strand Gene LocusTag Fraction Motility_inner_sample remove 2,265,669 - QEN71_RS10165 0.25 +0.1 2,265,673 + QEN71_RS10165 0.26 +1.3 2,265,674 - QEN71_RS10165 0.26 +0.1 2,265,674 - QEN71_RS10165 0.26 -2.1 2,265,895 + QEN71_RS10165 0.50 -1.6 2,265,895 + QEN71_RS10165 0.50 -0.7 2,265,896 - QEN71_RS10165 0.50 +0.3 2,265,896 - QEN71_RS10165 0.50 -0.4 2,265,896 - QEN71_RS10165 0.50 -0.1 2,266,123 + QEN71_RS10165 0.75 +2.0 2,266,124 - QEN71_RS10165 0.75 +1.5 2,266,124 - QEN71_RS10165 0.75 -0.7 2,266,132 + QEN71_RS10165 0.76 -1.5 2,266,135 + QEN71_RS10165 0.76 -2.7 2,266,136 - QEN71_RS10165 0.76 -0.1 2,266,136 - QEN71_RS10165 0.76 -1.0 2,266,183 + QEN71_RS10165 0.81 -1.0 2,266,183 + QEN71_RS10165 0.81 -0.3 2,266,183 + QEN71_RS10165 0.81 -0.9 2,266,362 + +0.5 2,266,362 + -0.5 2,266,362 + -1.3 2,266,363 - +0.7 2,266,363 - -0.4 2,266,396 - +1.4 2,266,630 - QEN71_RS10170 0.39 -0.0 2,266,630 - QEN71_RS10170 0.39 -0.5 2,266,630 - QEN71_RS10170 0.39 -1.3 2,266,630 - QEN71_RS10170 0.39 -0.1 2,266,634 - QEN71_RS10170 0.40 +0.5 2,266,783 - QEN71_RS10170 0.62 -0.7 2,266,804 - QEN71_RS10170 0.65 +0.2 2,267,022 - +0.3 2,267,158 + +1.6 2,267,233 + +0.4 2,267,278 + -2.0 2,267,371 + QEN71_RS10175 0.10 +0.5 2,267,371 + QEN71_RS10175 0.10 -0.7 2,267,371 + QEN71_RS10175 0.10 +0.6 2,267,371 + QEN71_RS10175 0.10 +0.6 2,267,413 + QEN71_RS10175 0.12 +0.6 2,267,413 + QEN71_RS10175 0.12 -2.1 2,267,414 - QEN71_RS10175 0.12 -1.1 2,267,414 - QEN71_RS10175 0.12 -0.3 2,267,414 - QEN71_RS10175 0.12 -1.6 2,267,414 - QEN71_RS10175 0.12 +1.4 2,267,414 - QEN71_RS10175 0.12 +0.9 2,267,435 + QEN71_RS10175 0.13 -0.1 2,267,435 + QEN71_RS10175 0.13 +1.1 2,267,435 + QEN71_RS10175 0.13 -0.4 2,267,436 - QEN71_RS10175 0.13 -0.1 2,267,506 + QEN71_RS10175 0.16 +0.5 2,267,506 + QEN71_RS10175 0.16 -0.2 2,267,506 + QEN71_RS10175 0.16 -0.7 2,267,506 + QEN71_RS10175 0.16 +0.5 2,267,507 - QEN71_RS10175 0.16 +0.3 2,267,507 - QEN71_RS10175 0.16 -0.5 2,267,507 - QEN71_RS10175 0.16 +1.0 2,267,507 - QEN71_RS10175 0.16 +1.5 2,267,507 - QEN71_RS10175 0.16 +0.9 2,267,510 + QEN71_RS10175 0.16 +0.9 2,267,510 + QEN71_RS10175 0.16 -0.8 2,267,510 + QEN71_RS10175 0.16 +0.9 2,267,511 - QEN71_RS10175 0.16 -1.0 2,267,511 - QEN71_RS10175 0.16 -1.5 2,267,600 - QEN71_RS10175 0.20 -0.2 2,267,717 + QEN71_RS10175 0.26 -0.3 2,267,717 + QEN71_RS10175 0.26 +1.1 2,267,717 + QEN71_RS10175 0.26 -0.4 2,267,717 + QEN71_RS10175 0.26 -0.4 2,267,718 - QEN71_RS10175 0.26 -1.2 2,267,791 + QEN71_RS10175 0.29 -0.6 2,267,791 + QEN71_RS10175 0.29 +0.7 2,267,801 - QEN71_RS10175 0.29 -0.7 2,267,801 - QEN71_RS10175 0.29 -0.7 2,267,827 + QEN71_RS10175 0.30 +0.1 2,267,827 + QEN71_RS10175 0.30 -0.9 2,267,828 - QEN71_RS10175 0.31 -0.5 2,267,858 - QEN71_RS10175 0.32 +0.3 2,267,858 - QEN71_RS10175 0.32 -1.1 2,267,914 + QEN71_RS10175 0.34 -1.2 2,267,915 - QEN71_RS10175 0.34 +0.0 2,267,980 + QEN71_RS10175 0.37 -0.1 2,267,980 + QEN71_RS10175 0.37 -0.5 2,267,981 - QEN71_RS10175 0.37 -0.5
Or see this region's nucleotide sequence