Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_04086

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 6
4,578,565	-		MIT1002_04084	0.83	+1.6
4,578,590	-		MIT1002_04084	0.86	+1.8
4,578,650	-				+0.2
4,578,720	-				+1.1
4,578,786	-				-0.0
4,578,794	+				+0.4
4,578,827	-				+1.7
4,578,829	+				+1.9
4,578,829	+				-0.1
4,578,837	-				-0.2
4,578,837	-				-0.7
4,578,885	+				+0.1
4,578,885	+				-1.3
4,578,885	+				+0.7
4,578,885	+				-0.3
4,578,966	+		MIT1002_04085	0.21	+1.3
4,578,966	+		MIT1002_04085	0.21	-0.6
4,579,028	-		MIT1002_04085	0.52	-1.5
4,579,105	-				-0.6
4,579,127	+				+0.9
4,579,127	+				+0.7
4,579,218	+				-1.5
4,579,303	-				-0.7
4,579,344	-				-0.4
4,579,349	-				+0.7
4,579,356	-				+1.3
4,579,356	-				-0.8
4,579,366	+				-1.2
4,579,366	+				+0.1
4,579,368	+				-1.3
4,579,376	-				-0.8
4,579,385	+				+0.9
4,579,385	+				-0.3
4,579,416	-				+1.3
4,579,521	+				+1.3
4,579,529	-				+0.3
4,579,724	+		MIT1002_04086	0.23	+0.9
4,579,731	+		MIT1002_04086	0.24	-2.1
4,579,845	-		MIT1002_04086	0.39	+0.3
4,579,881	-		MIT1002_04086	0.44	+1.7
4,579,895	+		MIT1002_04086	0.45	+0.3
4,579,897	+		MIT1002_04086	0.46	+0.0
4,579,905	-		MIT1002_04086	0.47	-0.3
4,579,971	-		MIT1002_04086	0.56	-1.8
4,579,971	-		MIT1002_04086	0.56	-0.4
4,579,971	-		MIT1002_04086	0.56	+0.1
4,579,971	-		MIT1002_04086	0.56	-1.0
4,579,971	-		MIT1002_04086	0.56	+0.5
4,580,016	+		MIT1002_04086	0.62	+0.4
4,580,025	+		MIT1002_04086	0.63	-1.1
4,580,033	-		MIT1002_04086	0.64	-1.6
4,580,080	+		MIT1002_04086	0.70	-1.2
4,580,101	-		MIT1002_04086	0.73	+0.8
4,580,122	-		MIT1002_04086	0.76	-1.4
4,580,148	+		MIT1002_04086	0.79	-0.6
4,580,244	-				-0.4
4,580,244	-				-2.1
4,580,306	+				+0.1
4,580,306	+				-1.2
4,580,340	-				-0.1
4,580,380	+				-0.2
4,580,380	+				+1.1
4,580,388	-				-0.7
4,580,402	-				+1.7
4,580,408	-				-2.6
4,580,489	+				+1.9
4,580,565	+				-0.4
4,580,565	+				-0.1
4,580,627	+				+0.4
4,580,642	+				-0.4
4,580,642	+				+0.4
4,580,650	-		MIT1002_04087	0.10	-1.2
4,580,650	-		MIT1002_04087	0.10	-0.0
4,580,654	+		MIT1002_04087	0.10	-0.4
4,580,718	+		MIT1002_04087	0.12	-1.1
4,580,736	+		MIT1002_04087	0.13	-0.2
4,580,741	+		MIT1002_04087	0.13	-0.8
4,580,769	+		MIT1002_04087	0.14	-1.3
4,580,777	-		MIT1002_04087	0.14	+1.6
4,580,777	-		MIT1002_04087	0.14	+1.2
4,580,789	-		MIT1002_04087	0.14	+2.3
4,580,851	-		MIT1002_04087	0.16	-0.1
4,580,886	+		MIT1002_04087	0.17	-0.3
4,580,894	-		MIT1002_04087	0.18	-2.3
4,580,896	-		MIT1002_04087	0.18	-0.3
4,580,923	+		MIT1002_04087	0.18	-0.5
4,580,931	-		MIT1002_04087	0.19	+0.3
4,580,931	-		MIT1002_04087	0.19	-0.6
4,580,940	+		MIT1002_04087	0.19	-1.1
4,581,019	+		MIT1002_04087	0.21	-0.9
4,581,033	-		MIT1002_04087	0.22	-1.3
4,581,146	-		MIT1002_04087	0.25	+1.7
4,581,158	-		MIT1002_04087	0.26	+0.8
4,581,195	+		MIT1002_04087	0.27	-0.7
4,581,205	+		MIT1002_04087	0.27	+0.1
4,581,276	+		MIT1002_04087	0.29	+0.0
4,581,277	-		MIT1002_04087	0.29	+0.1
4,581,284	-		MIT1002_04087	0.29	+0.3
4,581,284	-		MIT1002_04087	0.29	+0.1
4,581,285	+		MIT1002_04087	0.29	+0.6
4,581,303	-		MIT1002_04087	0.30	+0.2