Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03549

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 6
3,969,937	+				-0.2
3,970,016	+				-1.4
3,970,169	-				-1.9
3,970,343	-				+0.6
3,970,351	+				+0.0
3,970,351	+				-2.1
3,970,351	+				-1.7
3,970,351	+				-0.4
3,970,351	+				+1.0
3,970,351	+				-1.5
3,970,359	-				+0.8
3,970,359	-				-1.5
3,970,359	-				+0.1
3,970,359	-				-1.4
3,970,359	-				-0.2
3,970,359	-				+0.4
3,970,359	-				-0.8
3,970,465	+		MIT1002_03549	0.15	-0.4
3,970,473	-		MIT1002_03549	0.16	-0.0
3,970,515	+		MIT1002_03549	0.21	-0.9
3,970,518	-		MIT1002_03549	0.22	-0.4
3,970,522	-		MIT1002_03549	0.22	-1.2
3,970,626	-		MIT1002_03549	0.35	-0.1
3,970,709	-		MIT1002_03549	0.45	+0.4
3,970,759	+		MIT1002_03549	0.52	+0.8
3,970,767	+		MIT1002_03549	0.53	-1.3
3,970,817	-		MIT1002_03549	0.59	-1.0
3,970,860	-		MIT1002_03549	0.64	-2.4
3,971,011	+		MIT1002_03549	0.83	+0.8
3,971,099	-				-1.5
3,971,187	+				-1.0
3,971,218	-				+1.1
3,971,230	+				+0.7
3,971,236	-				+0.9
3,971,322	+				-0.8
3,971,324	+				+1.2
3,971,324	+				+0.2
3,971,324	+				-0.2
3,971,332	-				-0.6
3,971,342	-				+0.1
3,971,361	+				-0.6
3,971,361	+				-0.2
3,971,368	-				+0.7
3,971,369	-				-1.9
3,971,459	-				-1.3
3,971,581	+		MIT1002_03550	0.18	-0.8
3,971,608	-		MIT1002_03550	0.20	-1.2
3,971,614	-		MIT1002_03550	0.21	+0.4
3,971,626	-		MIT1002_03550	0.21	+0.6
3,971,743	+		MIT1002_03550	0.30	-0.7
3,971,752	-		MIT1002_03550	0.30	-1.0
3,971,794	+		MIT1002_03550	0.33	+1.0
3,971,799	+		MIT1002_03550	0.34	-0.3
3,971,804	+		MIT1002_03550	0.34	+0.2
3,971,807	-		MIT1002_03550	0.34	+0.2
3,971,809	+		MIT1002_03550	0.34	+0.1
3,971,851	+		MIT1002_03550	0.37	-1.2
3,971,870	+		MIT1002_03550	0.39	-1.7
3,971,884	+		MIT1002_03550	0.39	+0.9
3,971,884	+		MIT1002_03550	0.39	+0.7
3,971,892	-		MIT1002_03550	0.40	+0.4
3,971,892	-		MIT1002_03550	0.40	-0.4
3,971,892	-		MIT1002_03550	0.40	-1.1
3,971,892	-		MIT1002_03550	0.40	+0.1
3,972,077	+		MIT1002_03550	0.53	-0.2
3,972,077	+		MIT1002_03550	0.53	+0.2
3,972,085	-		MIT1002_03550	0.54	+0.1
3,972,101	+		MIT1002_03550	0.55	-0.6
3,972,134	+		MIT1002_03550	0.57	-0.5