Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03490

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 6
3,897,284	+				-1.3
3,897,287	+				+1.6
3,897,292	+				-0.5
3,897,292	-				-0.7
3,897,295	-				+0.2
3,897,295	-				-0.9
3,897,295	-				+0.6
3,897,295	-				-0.8
3,897,302	+				+1.2
3,897,302	+				-1.1
3,897,302	+				-1.8
3,897,302	+				-0.3
3,897,302	+				-0.0
3,897,302	+				-2.9
3,897,310	-				-0.1
3,897,310	-				+0.8
3,897,310	-				-0.4
3,897,358	-				-1.8
3,897,359	+				-0.7
3,897,360	+				-0.1
3,897,362	+				+0.8
3,897,362	+				+2.2
3,897,370	-				-1.5
3,897,381	-		MIT1002_03490	0.10	+0.6
3,897,388	-		MIT1002_03490	0.11	-0.7
3,897,388	-		MIT1002_03490	0.11	-0.8
3,897,396	+		MIT1002_03490	0.13	+1.1
3,897,426	-		MIT1002_03490	0.18	-0.2
3,897,438	-		MIT1002_03490	0.19	-1.0
3,897,459	+		MIT1002_03490	0.23	-1.8
3,897,479	-		MIT1002_03490	0.26	+0.6
3,897,497	-		MIT1002_03490	0.29	-0.2
3,897,517	+		MIT1002_03490	0.32	+2.9
3,897,576	+		MIT1002_03490	0.42	-0.8
3,897,576	+		MIT1002_03490	0.42	-0.7
3,897,584	-		MIT1002_03490	0.43	+0.4
3,897,591	-		MIT1002_03490	0.44	-1.0
3,897,600	-		MIT1002_03490	0.46	+0.8
3,897,782	+		MIT1002_03490	0.75	-0.6
3,897,784	+		MIT1002_03490	0.75	-0.5
3,897,918	+				-2.6
3,898,027	+				+0.6
3,898,027	+				-1.7
3,898,027	-				+1.2
3,898,035	-				-0.4
3,898,035	-				-0.8
3,898,045	-				+1.0
3,898,061	+				-0.4
3,898,061	+				+0.1
3,898,069	-				+0.6
3,898,069	-				+2.2
3,898,071	-				-1.1
3,898,138	+				-0.4
3,898,139	-				+0.2
3,898,150	-				-0.1
3,898,227	-				+0.5
3,898,255	+				-0.2
3,898,255	+				-1.0
3,898,263	-				+0.3
3,898,263	-				-1.2
3,898,263	-				+0.3
3,898,263	-				-0.6
3,898,265	+				-0.2
3,898,265	+				-0.7
3,898,273	-				+1.2
3,898,527	-		MIT1002_03491	0.14	-0.2
3,898,550	+		MIT1002_03491	0.14	-2.6
3,898,552	-		MIT1002_03491	0.15	+0.1
3,898,558	-		MIT1002_03491	0.15	+0.8
3,898,558	-		MIT1002_03491	0.15	+0.2
3,898,578	+		MIT1002_03491	0.16	-1.8
3,898,587	+		MIT1002_03491	0.16	-0.8
3,898,595	-		MIT1002_03491	0.16	+1.0
3,898,661	-		MIT1002_03491	0.19	-0.2
3,898,688	+		MIT1002_03491	0.20	+0.8
3,898,707	+		MIT1002_03491	0.20	-0.3
3,898,708	+		MIT1002_03491	0.20	-0.5
3,898,794	+		MIT1002_03491	0.24	-1.8
3,898,823	+		MIT1002_03491	0.25	-0.4
3,898,831	-		MIT1002_03491	0.25	-0.9
3,898,873	-		MIT1002_03491	0.27	-2.0
3,898,890	-		MIT1002_03491	0.27	-0.5
3,898,895	-		MIT1002_03491	0.28	-1.2
3,898,911	-		MIT1002_03491	0.28	-2.1
3,898,917	+		MIT1002_03491	0.28	-2.0
3,898,917	+		MIT1002_03491	0.28	+1.0
3,898,934	+		MIT1002_03491	0.29	-0.1