Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03369

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 6
3,768,392	+				-0.1
3,768,636	+				+0.1
3,768,644	-				-0.2
3,768,699	+				-0.9
3,768,707	-				+1.2
3,768,709	+				-0.9
3,768,719	-				+0.6
3,768,801	+		MIT1002_03368	0.12	+0.3
3,768,859	-		MIT1002_03368	0.24	-1.8
3,768,877	-		MIT1002_03368	0.28	+1.7
3,768,881	+		MIT1002_03368	0.29	-0.1
3,768,919	-		MIT1002_03368	0.37	-0.5
3,768,947	-		MIT1002_03368	0.43	-1.8
3,768,964	+		MIT1002_03368	0.47	+0.1
3,768,972	-		MIT1002_03368	0.48	+0.6
3,769,016	-		MIT1002_03368	0.58	-1.1
3,769,168	+				+1.1
3,769,168	+				-2.9
3,769,176	-				-1.9
3,769,190	+				+2.7
3,769,190	+				-0.3
3,769,193	-				-0.2
3,769,198	-				-0.6
3,769,198	-				-0.8
3,769,234	+				+0.3
3,769,310	+				-2.1
3,769,357	+				-0.9
3,769,391	+				+0.1
3,769,419	-				-0.2
3,769,426	+		MIT1002_03369	0.10	+0.6
3,769,432	-		MIT1002_03369	0.11	-0.8
3,769,432	-		MIT1002_03369	0.11	-1.0
3,769,558	-		MIT1002_03369	0.20	-0.0
3,769,593	+		MIT1002_03369	0.23	+0.3
3,769,596	-		MIT1002_03369	0.23	-1.0
3,769,598	+		MIT1002_03369	0.23	-1.0
3,769,623	-		MIT1002_03369	0.25	-1.3
3,769,625	+		MIT1002_03369	0.25	-0.8
3,769,779	+		MIT1002_03369	0.37	+0.2
3,769,787	-		MIT1002_03369	0.38	-1.1
3,769,787	-		MIT1002_03369	0.38	-0.6
3,769,825	+		MIT1002_03369	0.41	-0.3
3,769,865	-		MIT1002_03369	0.44	-1.3
3,769,865	-		MIT1002_03369	0.44	+0.3
3,769,917	+		MIT1002_03369	0.48	+0.8
3,769,951	-		MIT1002_03369	0.50	+2.0
3,770,031	+		MIT1002_03369	0.56	+0.5
3,770,182	+		MIT1002_03369	0.68	-0.3
3,770,182	+		MIT1002_03369	0.68	+0.0
3,770,190	-		MIT1002_03369	0.68	+0.6
3,770,190	-		MIT1002_03369	0.68	-0.9
3,770,190	-		MIT1002_03369	0.68	+0.7
3,770,190	-		MIT1002_03369	0.68	+1.8
3,770,220	+		MIT1002_03369	0.71	+0.1
3,770,252	+		MIT1002_03369	0.73	-1.7
3,770,260	-		MIT1002_03369	0.74	+0.4
3,770,260	-		MIT1002_03369	0.74	+0.6
3,770,275	-		MIT1002_03369	0.75	+0.1
3,770,374	+		MIT1002_03369	0.82	-0.7
3,770,385	+		MIT1002_03369	0.83	-0.8
3,770,393	-		MIT1002_03369	0.84	+0.5
3,770,393	-		MIT1002_03369	0.84	+1.5
3,770,527	-				+0.2
3,770,590	-				-2.7
3,770,861	+				+0.1
3,770,883	-				-1.9
3,771,004	+		MIT1002_03370	0.19	+0.3
3,771,155	+		MIT1002_03370	0.33	+1.1
3,771,361	+		MIT1002_03370	0.51	-1.2
3,771,369	-		MIT1002_03370	0.52	+0.4
3,771,384	-		MIT1002_03370	0.53	-0.8
3,771,398	+		MIT1002_03370	0.55	+2.6
3,771,450	-		MIT1002_03370	0.59	-2.2
3,771,512	+		MIT1002_03370	0.65	-1.0
3,771,517	+		MIT1002_03370	0.65	-0.5
3,771,524	+		MIT1002_03370	0.66	+0.2
3,771,531	-		MIT1002_03370	0.67	-1.7
3,771,538	+		MIT1002_03370	0.67	+0.3
3,771,538	+		MIT1002_03370	0.67	+1.1
3,771,546	-		MIT1002_03370	0.68	-1.9