Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03104

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 6
3,457,447	-		MIT1002_03102	0.51	+1.4
3,457,466	+		MIT1002_03102	0.53	-0.7
3,457,580	-		MIT1002_03102	0.66	+1.0
3,457,580	-		MIT1002_03102	0.66	+0.3
3,457,582	+		MIT1002_03102	0.66	+0.3
3,457,590	-		MIT1002_03102	0.67	-2.7
3,457,598	+		MIT1002_03102	0.68	-1.0
3,457,608	+		MIT1002_03102	0.69	-1.3
3,457,716	-		MIT1002_03102	0.80	-0.2
3,457,795	+		MIT1002_03102	0.89	-0.0
3,457,811	-				-0.2
3,457,813	+				+0.1
3,457,827	+				+2.3
3,457,827	+				-0.1
3,457,827	+				+0.3
3,457,835	-				+0.8
3,457,835	-				+0.4
3,457,861	+				+1.2
3,457,861	+				+2.6
3,457,867	-				+1.1
3,457,867	-				+1.3
3,457,867	-				+0.1
3,457,869	-				+0.4
3,457,939	+				-0.8
3,457,962	-				-0.4
3,458,106	+		MIT1002_03103	0.14	-1.8
3,458,141	-		MIT1002_03103	0.28	-0.3
3,458,312	+				+0.5
3,458,315	-				+0.1
3,458,320	-				-0.5
3,458,337	-				-0.8
3,458,337	-				-0.4
3,458,339	+				+1.1
3,458,339	+				-1.7
3,458,339	+				+0.4
3,458,339	+				+2.7
3,458,347	-				-0.7
3,458,347	-				+0.4
3,458,347	-				-0.2
3,458,347	-				+1.8
3,458,370	-				-1.9
3,458,377	-				+0.5
3,458,378	+				+1.1
3,458,378	+				-1.1
3,458,378	+				-2.3
3,458,410	-				+0.2
3,458,470	+				+0.7
3,458,498	-		MIT1002_03104	0.13	+1.4
3,458,632	-		MIT1002_03104	0.29	+0.2
3,458,682	+		MIT1002_03104	0.35	+0.6
3,458,682	+		MIT1002_03104	0.35	+0.8
3,458,682	+		MIT1002_03104	0.35	-0.8
3,458,690	-		MIT1002_03104	0.36	+2.2
3,458,690	-		MIT1002_03104	0.36	+2.3
3,458,690	-		MIT1002_03104	0.36	-0.0
3,458,708	+		MIT1002_03104	0.38	-0.1
3,458,716	-		MIT1002_03104	0.39	+1.1
3,458,798	+		MIT1002_03104	0.50	-2.1
3,458,806	-		MIT1002_03104	0.51	-1.2
3,458,806	-		MIT1002_03104	0.51	-1.6
3,458,808	+		MIT1002_03104	0.51	+2.1
3,458,886	-		MIT1002_03104	0.60	-1.4
3,458,905	-		MIT1002_03104	0.63	+1.4
3,458,915	-		MIT1002_03104	0.64	+0.2
3,458,915	-		MIT1002_03104	0.64	+0.1
3,458,959	+		MIT1002_03104	0.69	-0.3
3,458,984	+		MIT1002_03104	0.72	-0.6
3,458,984	+		MIT1002_03104	0.72	-0.4
3,458,996	+		MIT1002_03104	0.74	+1.8
3,459,014	-		MIT1002_03104	0.76	+0.5
3,459,060	-		MIT1002_03104	0.82	-1.3
3,459,106	+		MIT1002_03104	0.87	+1.2
3,459,114	-		MIT1002_03104	0.88	+1.6
3,459,276	+		MIT1002_03105	0.19	+0.1
3,459,276	+		MIT1002_03105	0.19	+1.2
3,459,281	+		MIT1002_03105	0.20	-0.0
3,459,289	-		MIT1002_03105	0.22	-1.1
3,459,289	-		MIT1002_03105	0.22	+0.6
3,459,354	-		MIT1002_03105	0.37	+0.9
3,459,364	-		MIT1002_03105	0.40	-0.5
3,459,460	+		MIT1002_03105	0.62	-0.9
3,459,574	+		MIT1002_03105	0.89	-1.9
3,459,671	+				+0.9
3,459,774	+				-0.4
3,459,782	-				-0.2
3,459,817	+				-1.5
3,459,827	+		MIT1002_03106	0.10	-1.4
3,459,854	+		MIT1002_03106	0.13	-0.4
3,459,857	-		MIT1002_03106	0.13	-0.0
3,459,857	-		MIT1002_03106	0.13	-0.8
3,459,882	+		MIT1002_03106	0.15	+0.8
3,459,953	+		MIT1002_03106	0.22	-0.9
3,459,953	+		MIT1002_03106	0.22	+0.5
3,459,961	-		MIT1002_03106	0.23	+0.2
3,459,961	-		MIT1002_03106	0.23	-3.0
3,459,966	-		MIT1002_03106	0.24	+1.8
3,460,036	+		MIT1002_03106	0.30	-0.0
3,460,040	+		MIT1002_03106	0.31	+0.4
3,460,044	-		MIT1002_03106	0.31	-0.0
3,460,131	-		MIT1002_03106	0.40	+0.1
3,460,135	+		MIT1002_03106	0.40	-0.9
3,460,160	+		MIT1002_03106	0.42	+0.5
3,460,168	-		MIT1002_03106	0.43	+2.2
3,460,202	-		MIT1002_03106	0.46	+0.6