Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02902

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 6
3,224,766	-				+0.0
3,224,795	+				-1.9
3,224,938	-		MIT1002_02900	0.11	+0.6
3,225,045	-		MIT1002_02900	0.46	+0.2
3,225,104	+		MIT1002_02900	0.66	+0.8
3,225,112	-		MIT1002_02900	0.68	-1.7
3,225,194	-				-0.2
3,225,199	-				-0.7
3,225,210	+				-0.9
3,225,260	+		MIT1002_02901	0.17	-0.1
3,225,335	+		MIT1002_02901	0.43	+0.6
3,225,343	-		MIT1002_02901	0.46	+0.0
3,225,367	+		MIT1002_02901	0.55	+0.3
3,225,369	+		MIT1002_02901	0.55	-0.4
3,225,399	+		MIT1002_02901	0.66	+1.0
3,225,442	-		MIT1002_02901	0.81	+1.1
3,225,442	-		MIT1002_02901	0.81	-1.2
3,225,582	+				-0.8
3,225,598	+				+0.3
3,225,695	+				-0.2
3,225,703	-				-1.4
3,225,703	-				-0.7
3,225,706	+				-0.8
3,225,762	-				-0.7
3,225,783	-				+1.2
3,225,789	+				+0.2
3,225,789	+				-1.4
3,225,797	-				+0.3
3,225,797	-				-0.3
3,225,805	-				-0.9
3,225,807	-				+0.8
3,225,982	-		MIT1002_02902	0.17	+0.2
3,226,014	+		MIT1002_02902	0.18	-0.9
3,226,022	-		MIT1002_02902	0.19	+0.6
3,226,022	-		MIT1002_02902	0.19	+1.5
3,226,198	+		MIT1002_02902	0.27	-1.5
3,226,246	+		MIT1002_02902	0.30	-2.4
3,226,248	+		MIT1002_02902	0.30	-0.2
3,226,337	+		MIT1002_02902	0.34	-0.5
3,226,451	+		MIT1002_02902	0.40	-0.9
3,226,455	-		MIT1002_02902	0.40	+1.1
3,226,459	-		MIT1002_02902	0.40	+0.1
3,226,459	-		MIT1002_02902	0.40	+0.8
3,226,525	-		MIT1002_02902	0.44	-0.9
3,226,544	+		MIT1002_02902	0.44	-1.2
3,226,544	+		MIT1002_02902	0.44	-0.3
3,226,544	+		MIT1002_02902	0.44	-0.3
3,226,669	-		MIT1002_02902	0.51	-1.1
3,226,683	-		MIT1002_02902	0.51	-0.7
3,226,707	+		MIT1002_02902	0.53	-0.1
3,226,709	+		MIT1002_02902	0.53	+0.6
3,226,713	-		MIT1002_02902	0.53	-0.7
3,226,713	-		MIT1002_02902	0.53	-0.9
3,226,719	+		MIT1002_02902	0.53	+1.6
3,226,751	-		MIT1002_02902	0.55	-0.8
3,226,763	+		MIT1002_02902	0.55	+0.6
3,226,763	+		MIT1002_02902	0.55	+1.0
3,226,844	+		MIT1002_02902	0.59	+0.8
3,226,902	+		MIT1002_02902	0.62	+0.1
3,226,934	+		MIT1002_02902	0.64	-1.0
3,226,960	-		MIT1002_02902	0.65	-0.0
3,226,960	-		MIT1002_02902	0.65	-0.2
3,227,057	-		MIT1002_02902	0.70	+1.9
3,227,057	-		MIT1002_02902	0.70	-0.7
3,227,072	+		MIT1002_02902	0.70	-0.5
3,227,084	+		MIT1002_02902	0.71	-0.3
3,227,084	+		MIT1002_02902	0.71	-1.1
3,227,084	+		MIT1002_02902	0.71	+0.9
3,227,092	-		MIT1002_02902	0.71	-1.9
3,227,259	+		MIT1002_02902	0.80	-0.8
3,227,261	-		MIT1002_02902	0.80	-0.9
3,227,313	-		MIT1002_02902	0.82	+1.8
3,227,443	-		MIT1002_02902	0.89	-0.7
3,227,452	+		MIT1002_02902	0.89	-1.2
3,227,452	+		MIT1002_02902	0.89	-0.7
3,227,467	+		MIT1002_02902	0.90	+0.3
3,227,491	+				-1.2
3,227,499	-				-1.2
3,227,499	-				+2.9
3,227,499	-				-0.4
3,227,719	-				-0.3
3,227,750	+				-0.3
3,227,800	-				-0.6
3,227,938	+		MIT1002_02903	0.22	+0.1
3,227,938	+		MIT1002_02903	0.22	-0.9
3,227,938	+		MIT1002_02903	0.22	-0.3
3,227,938	+		MIT1002_02903	0.22	+2.0
3,227,946	-		MIT1002_02903	0.24	-0.6
3,227,996	+		MIT1002_02903	0.38	-0.4
3,228,060	+		MIT1002_02903	0.55	+1.1
3,228,118	+		MIT1002_02903	0.71	-0.8
3,228,118	+		MIT1002_02903	0.71	+0.1
3,228,118	+		MIT1002_02903	0.71	-0.3
3,228,118	+		MIT1002_02903	0.71	+0.6
3,228,118	+		MIT1002_02903	0.71	-0.9
3,228,118	+		MIT1002_02903	0.71	-0.6
3,228,126	-		MIT1002_02903	0.73	-0.2
3,228,126	-		MIT1002_02903	0.73	+0.3
3,228,126	-		MIT1002_02903	0.73	-0.9
3,228,158	+		MIT1002_02903	0.82	-0.5
3,228,269	+		MIT1002_02904	0.33	+0.0
3,228,269	+		MIT1002_02904	0.33	-0.1
3,228,269	+		MIT1002_02904	0.33	-1.2
3,228,381	+				+0.6
3,228,389	-				+1.6
3,228,484	+				+0.4
3,228,492	-				-0.0
3,228,537	-				+0.4
3,228,552	+				-0.8
3,228,593	-		MIT1002_02905	0.15	+0.5
3,228,631	+		MIT1002_02905	0.21	+0.2
3,228,631	+		MIT1002_02905	0.21	+1.7