Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02820

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 6
3,123,566	-		MIT1002_02818	0.73	+0.6
3,123,594	+		MIT1002_02818	0.75	+1.6
3,123,599	+		MIT1002_02818	0.76	-0.5
3,123,599	+		MIT1002_02818	0.76	+2.4
3,123,607	-		MIT1002_02818	0.77	+0.3
3,123,607	-		MIT1002_02818	0.77	-1.2
3,123,607	-		MIT1002_02818	0.77	-0.1
3,123,607	-		MIT1002_02818	0.77	-0.1
3,123,607	-		MIT1002_02818	0.77	-0.3
3,123,661	+		MIT1002_02818	0.82	-2.0
3,123,778	-				-0.5
3,123,778	-				-0.4
3,123,810	-				-0.0
3,123,847	+				+1.1
3,123,929	+		MIT1002_02819	0.10	-0.9
3,123,929	+		MIT1002_02819	0.10	-2.6
3,123,940	+		MIT1002_02819	0.12	+0.1
3,124,000	+		MIT1002_02819	0.21	+1.6
3,124,008	-		MIT1002_02819	0.22	+0.9
3,124,043	+		MIT1002_02819	0.28	+0.3
3,124,043	+		MIT1002_02819	0.28	+1.7
3,124,049	-		MIT1002_02819	0.29	-2.2
3,124,049	-		MIT1002_02819	0.29	+0.3
3,124,060	-		MIT1002_02819	0.30	+0.1
3,124,078	-		MIT1002_02819	0.33	-1.2
3,124,231	+		MIT1002_02819	0.57	-0.1
3,124,251	+		MIT1002_02819	0.60	-1.3
3,124,251	+		MIT1002_02819	0.60	-0.2
3,124,258	-		MIT1002_02819	0.61	+1.6
3,124,259	-		MIT1002_02819	0.61	+0.8
3,124,259	-		MIT1002_02819	0.61	-1.6
3,124,259	-		MIT1002_02819	0.61	-1.1
3,124,266	-		MIT1002_02819	0.62	-2.4
3,124,294	-		MIT1002_02819	0.67	+0.1
3,124,337	+		MIT1002_02819	0.73	-1.0
3,124,347	-		MIT1002_02819	0.75	+0.1
3,124,379	-		MIT1002_02819	0.80	-1.1
3,124,402	+		MIT1002_02819	0.83	-0.9
3,124,475	-				-0.4
3,124,476	-				+0.1
3,124,537	+				+0.6
3,124,542	+				+0.4
3,124,550	-				+1.3
3,124,550	-				-2.5
3,124,550	-				-0.6
3,124,653	+		MIT1002_02820	0.31	-1.1
3,124,697	-		MIT1002_02820	0.41	-1.7
3,124,720	+		MIT1002_02820	0.47	+2.6
3,124,877	+		MIT1002_02820	0.84	-2.1
3,124,917	-				-1.0
3,124,917	-				-0.7
3,124,927	+				+0.6
3,124,945	-				-0.7
3,124,963	+				-0.2
3,124,969	-				-2.1
3,124,982	+				-0.9
3,124,982	+				-0.0
3,125,000	+				+0.2
3,125,030	-		MIT1002_02821	0.12	-2.7
3,125,066	-		MIT1002_02821	0.17	+2.1
3,125,145	-		MIT1002_02821	0.29	-0.2
3,125,180	+		MIT1002_02821	0.34	+0.1
3,125,180	+		MIT1002_02821	0.34	+0.3
3,125,191	-		MIT1002_02821	0.36	-2.9
3,125,209	-		MIT1002_02821	0.38	-0.7
3,125,214	+		MIT1002_02821	0.39	+1.1
3,125,237	+		MIT1002_02821	0.43	-2.3
3,125,255	+		MIT1002_02821	0.45	+1.0
3,125,255	+		MIT1002_02821	0.45	-0.4
3,125,255	+		MIT1002_02821	0.45	+0.8
3,125,288	-		MIT1002_02821	0.50	-0.4
3,125,332	+		MIT1002_02821	0.57	+1.1
3,125,351	-		MIT1002_02821	0.60	+0.6
3,125,355	+		MIT1002_02821	0.60	-0.5
3,125,400	-		MIT1002_02821	0.67	+0.1
3,125,408	-		MIT1002_02821	0.68	-1.1
3,125,436	+		MIT1002_02821	0.72	-0.9
3,125,444	-		MIT1002_02821	0.74	+1.2
3,125,444	-		MIT1002_02821	0.74	+0.7
3,125,512	+		MIT1002_02821	0.84	-0.5
3,125,522	+		MIT1002_02821	0.85	-0.9
3,125,775	+		MIT1002_02822	0.13	-0.2
3,125,783	-		MIT1002_02822	0.14	+0.5
3,125,809	-		MIT1002_02822	0.16	-1.2
3,125,831	-		MIT1002_02822	0.18	-1.1
3,125,869	+		MIT1002_02822	0.21	+0.3
3,125,869	+		MIT1002_02822	0.21	-0.7
3,125,869	+		MIT1002_02822	0.21	-0.0
3,125,869	+		MIT1002_02822	0.21	-1.0
3,125,877	-		MIT1002_02822	0.22	+0.6
3,125,925	+		MIT1002_02822	0.26	-1.2