Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02691

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 6
2,991,469	+		MIT1002_02690	0.20	+0.3
2,991,469	+		MIT1002_02690	0.20	+0.1
2,991,558	+		MIT1002_02690	0.32	-1.6
2,991,564	+		MIT1002_02690	0.32	+1.6
2,991,566	-		MIT1002_02690	0.33	-1.8
2,991,566	-		MIT1002_02690	0.33	-0.5
2,991,675	-		MIT1002_02690	0.47	-1.5
2,991,703	-		MIT1002_02690	0.51	+0.3
2,991,719	-		MIT1002_02690	0.53	-1.1
2,991,729	-		MIT1002_02690	0.54	+1.6
2,991,747	-		MIT1002_02690	0.56	+0.0
2,991,749	+		MIT1002_02690	0.57	-0.4
2,991,757	-		MIT1002_02690	0.58	+0.4
2,991,757	-		MIT1002_02690	0.58	+0.4
2,991,757	-		MIT1002_02690	0.58	-0.5
2,991,757	-		MIT1002_02690	0.58	+0.8
2,991,761	-		MIT1002_02690	0.58	-0.3
2,991,854	+		MIT1002_02690	0.70	-0.8
2,991,862	-		MIT1002_02690	0.72	-2.6
2,991,917	-		MIT1002_02690	0.79	-0.1
2,992,049	+				-1.4
2,992,055	+				+0.4
2,992,084	-				+1.5
2,992,210	-				-1.1
2,992,344	+				+1.1
2,992,391	-				-0.5
2,992,417	+				+0.7
2,992,425	-				+0.3
2,992,454	+		MIT1002_02691	0.11	+0.5
2,992,565	+		MIT1002_02691	0.46	+0.4
2,992,610	+		MIT1002_02691	0.61	-0.5
2,992,610	+		MIT1002_02691	0.61	+2.1
2,992,610	+		MIT1002_02691	0.61	-0.1
2,992,610	+		MIT1002_02691	0.61	-1.5
2,992,610	+		MIT1002_02691	0.61	-0.5
2,992,610	+		MIT1002_02691	0.61	+3.4
2,992,610	+		MIT1002_02691	0.61	-1.7
2,992,725	+				+1.5
2,992,725	+				+0.5