Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02590

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 6
2,890,233	+				-3.4
2,890,413	-		MIT1002_02589	0.15	+0.3
2,890,423	-		MIT1002_02589	0.16	-2.7
2,890,423	-		MIT1002_02589	0.16	-0.1
2,890,530	+		MIT1002_02589	0.29	+0.5
2,890,530	+		MIT1002_02589	0.29	-1.4
2,890,626	-		MIT1002_02589	0.41	+1.5
2,890,636	+		MIT1002_02589	0.42	+0.3
2,890,644	-		MIT1002_02589	0.43	-0.1
2,890,644	-		MIT1002_02589	0.43	-1.2
2,890,659	-		MIT1002_02589	0.45	+0.3
2,890,722	-		MIT1002_02589	0.52	+0.4
2,890,761	+		MIT1002_02589	0.57	+1.7
2,890,769	-		MIT1002_02589	0.58	+0.0
2,890,920	-		MIT1002_02589	0.76	+0.2
2,890,928	+		MIT1002_02589	0.77	+0.4
2,890,929	+		MIT1002_02589	0.77	+0.9
2,890,948	+		MIT1002_02589	0.79	+0.8
2,891,015	-		MIT1002_02589	0.87	+0.3
2,891,015	-		MIT1002_02589	0.87	-0.1
2,891,015	-		MIT1002_02589	0.87	-1.1
2,891,125	+				+0.3
2,891,133	-				-0.8
2,891,160	+				+0.6
2,891,160	+				-1.1
2,891,236	+				+1.0
2,891,239	-				+0.9
2,891,267	+				-2.1
2,891,275	-				-2.5
2,891,282	+				-1.2
2,891,314	-		MIT1002_02590	0.14	+1.4
2,891,370	-		MIT1002_02590	0.22	+0.2
2,891,390	+		MIT1002_02590	0.25	+0.3
2,891,469	+		MIT1002_02590	0.37	+1.3
2,891,492	+		MIT1002_02590	0.41	-1.6
2,891,500	-		MIT1002_02590	0.42	-0.1
2,891,733	+		MIT1002_02590	0.78	+0.9
2,891,805	+		MIT1002_02590	0.89	-0.1
2,891,813	-				-0.2
2,891,813	-				+0.5
2,891,813	-				-0.6
2,891,813	-				+0.9
2,891,813	-				-1.2
2,891,815	+				-1.7
2,891,815	+				-0.6
2,891,831	-				-0.3
2,891,831	-				+1.5
2,891,935	+				-0.2
2,891,943	-				+1.1
2,892,038	+				+0.6
2,892,105	-				-0.0
2,892,197	+				-0.9
2,892,205	-				-0.1
2,892,205	-				-0.9
2,892,260	-		MIT1002_02591	0.14	+0.1
2,892,260	-		MIT1002_02591	0.14	-1.1
2,892,276	+		MIT1002_02591	0.19	+1.2
2,892,297	-		MIT1002_02591	0.26	+0.2
2,892,412	+		MIT1002_02591	0.65	+0.8
2,892,432	+		MIT1002_02591	0.72	-0.4
2,892,440	-		MIT1002_02591	0.75	+1.3
2,892,562	+				+1.9
2,892,570	-				+1.1