Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02552

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 6
2,844,652	-				-1.1
2,844,658	+				-0.1
2,844,669	-				-0.1
2,844,723	+				-0.5
2,844,739	-				+0.7
2,844,856	+				-1.0
2,844,864	-				-0.2
2,844,999	+				-0.0
2,845,058	+		MIT1002_02551	0.14	-0.2
2,845,075	+		MIT1002_02551	0.17	-0.3
2,845,088	+		MIT1002_02551	0.19	-0.9
2,845,088	+		MIT1002_02551	0.19	-1.4
2,845,111	-		MIT1002_02551	0.22	-0.8
2,845,115	+		MIT1002_02551	0.23	-0.6
2,845,125	+		MIT1002_02551	0.24	-1.6
2,845,149	-		MIT1002_02551	0.28	+1.7
2,845,201	+		MIT1002_02551	0.35	+1.8
2,845,208	+		MIT1002_02551	0.36	-0.5
2,845,215	-		MIT1002_02551	0.37	+2.0
2,845,216	-		MIT1002_02551	0.38	-0.5
2,845,216	-		MIT1002_02551	0.38	+2.7
2,845,269	-		MIT1002_02551	0.45	-2.8
2,845,292	-		MIT1002_02551	0.49	+0.2
2,845,320	+		MIT1002_02551	0.53	+0.0
2,845,322	+		MIT1002_02551	0.53	-0.8
2,845,328	-		MIT1002_02551	0.54	+1.5
2,845,404	+		MIT1002_02551	0.65	+1.6
2,845,519	+		MIT1002_02551	0.82	-0.6
2,845,520	-		MIT1002_02551	0.82	+1.3
2,845,529	-		MIT1002_02551	0.83	+0.2
2,845,567	+		MIT1002_02551	0.89	-0.6
2,845,606	+				+1.0
2,845,647	-				-1.5
2,845,658	-				+0.1
2,845,660	+				+0.9
2,845,703	-				+1.1
2,845,763	+				-0.4
2,845,858	-		MIT1002_02552	0.18	+1.3
2,845,858	-		MIT1002_02552	0.18	-1.6
2,845,858	-		MIT1002_02552	0.18	+3.1
2,846,084	+		MIT1002_02552	0.37	+2.2
2,846,100	+		MIT1002_02552	0.38	-0.9
2,846,169	+		MIT1002_02552	0.44	+0.6
2,846,175	-		MIT1002_02552	0.44	-1.7
2,846,175	-		MIT1002_02552	0.44	-0.5
2,846,177	-		MIT1002_02552	0.44	-0.8
2,846,248	+		MIT1002_02552	0.50	+2.1
2,846,256	-		MIT1002_02552	0.51	+2.1
2,846,403	+		MIT1002_02552	0.63	-0.1
2,846,403	+		MIT1002_02552	0.63	-0.5
2,846,411	-		MIT1002_02552	0.64	-0.1
2,846,440	-		MIT1002_02552	0.66	+2.1
2,846,526	-		MIT1002_02552	0.73	+0.5
2,846,536	+		MIT1002_02552	0.74	+0.7
2,846,536	+		MIT1002_02552	0.74	-0.6
2,846,584	+		MIT1002_02552	0.78	-1.3
2,846,640	-		MIT1002_02552	0.83	-1.0
2,846,741	+				+0.6
2,846,926	+				-0.1
2,846,976	-				+2.7
2,847,031	-		MIT1002_02553	0.11	+0.2
2,847,213	-		MIT1002_02553	0.30	-0.6
2,847,235	+		MIT1002_02553	0.32	+0.6
2,847,304	+		MIT1002_02553	0.39	+1.1
2,847,306	-		MIT1002_02553	0.39	+2.1
2,847,312	-		MIT1002_02553	0.40	+1.1
2,847,315	-		MIT1002_02553	0.40	+1.7
2,847,396	-		MIT1002_02553	0.49	-0.2
2,847,410	-		MIT1002_02553	0.50	+1.2
2,847,414	+		MIT1002_02553	0.51	-0.9
2,847,436	+		MIT1002_02553	0.53	+0.9
2,847,472	-		MIT1002_02553	0.57	-1.3
2,847,475	+		MIT1002_02553	0.57	+0.1
2,847,509	-		MIT1002_02553	0.61	+0.6
2,847,511	-		MIT1002_02553	0.61	-2.8
2,847,576	+		MIT1002_02553	0.68	+1.4
2,847,576	-		MIT1002_02553	0.68	-0.7
2,847,583	+		MIT1002_02553	0.68	+0.2
2,847,583	+		MIT1002_02553	0.68	+0.3
2,847,591	-		MIT1002_02553	0.69	+0.6
2,847,591	-		MIT1002_02553	0.69	-0.9
2,847,627	-		MIT1002_02553	0.73	+0.6
2,847,627	-		MIT1002_02553	0.73	+1.0
2,847,681	-		MIT1002_02553	0.79	+0.5
2,847,699	+		MIT1002_02553	0.81	+0.7
2,847,701	+		MIT1002_02553	0.81	+1.6
2,847,756	+		MIT1002_02553	0.87	-2.2
2,847,830	-				-0.8