Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02301

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 6
2,562,520	-		MIT1002_02299	0.71	-0.0
2,562,557	-		MIT1002_02299	0.75	+1.0
2,562,558	-		MIT1002_02299	0.75	+0.2
2,562,577	-		MIT1002_02299	0.77	+1.3
2,562,582	-		MIT1002_02299	0.78	-0.7
2,562,594	+		MIT1002_02299	0.79	+0.2
2,562,626	-		MIT1002_02299	0.83	+0.8
2,562,660	-		MIT1002_02299	0.86	-0.7
2,562,694	+				+0.0
2,562,704	-				-0.2
2,562,751	+				-0.3
2,562,773	-				-0.2
2,562,818	-				-3.2
2,562,818	-				+0.2
2,562,825	+				-0.7
2,562,833	-				+1.1
2,562,960	-		MIT1002_02300	0.23	-0.1
2,562,968	+		MIT1002_02300	0.25	+0.3
2,563,009	-		MIT1002_02300	0.36	-0.2
2,563,133	+		MIT1002_02300	0.67	-0.8
2,563,136	-		MIT1002_02300	0.68	+0.5
2,563,175	+		MIT1002_02300	0.78	+0.3
2,563,175	+		MIT1002_02300	0.78	-0.5
2,563,175	+		MIT1002_02300	0.78	-0.1
2,563,198	-		MIT1002_02300	0.84	+2.2
2,563,229	+				-2.1
2,563,242	-				-1.0
2,563,251	-				+1.0
2,563,492	+				-1.8
2,563,521	+				+1.3
2,563,577	-				-1.7
2,563,828	+		MIT1002_02301	0.31	+0.7
2,563,908	+		MIT1002_02301	0.38	-0.9
2,563,957	+		MIT1002_02301	0.43	-0.9
2,564,009	-		MIT1002_02301	0.47	-0.1
2,564,012	+		MIT1002_02301	0.47	+0.3
2,564,182	+		MIT1002_02301	0.62	+0.5
2,564,182	+		MIT1002_02301	0.62	-2.0
2,564,186	+		MIT1002_02301	0.63	+0.8
2,564,190	-		MIT1002_02301	0.63	-0.4
2,564,213	-		MIT1002_02301	0.65	+0.3
2,564,262	+		MIT1002_02301	0.69	+0.5
2,564,303	-		MIT1002_02301	0.73	+1.4
2,564,401	+		MIT1002_02301	0.82	-0.4
2,564,602	+				-0.4
2,564,667	+				-1.5
2,564,673	-				+0.7
2,564,755	-				+2.4
2,564,763	+				-1.1
2,564,771	-				-1.5
2,564,781	+				-0.9
2,564,781	+				+1.0
2,564,799	-				-1.1
2,564,821	+				+1.2
2,564,897	+				-1.2
2,564,900	-				+2.0
2,564,901	+				+1.0
2,564,947	+				-0.8
2,564,947	+				+3.0
2,564,955	-				-3.2
2,564,955	-				+0.4
2,564,955	-				-0.9
2,564,955	-				-0.4
2,565,031	-		MIT1002_02302	0.12	-0.5
2,565,036	-		MIT1002_02302	0.12	-0.1
2,565,158	-		MIT1002_02302	0.15	-0.3
2,565,198	+		MIT1002_02302	0.17	+1.5
2,565,271	+		MIT1002_02302	0.19	-0.9
2,565,274	-		MIT1002_02302	0.19	+2.2
2,565,313	-		MIT1002_02302	0.20	-0.4
2,565,323	-		MIT1002_02302	0.20	+0.7
2,565,323	-		MIT1002_02302	0.20	+0.6
2,565,329	+		MIT1002_02302	0.21	+0.5
2,565,345	-		MIT1002_02302	0.21	+1.0
2,565,485	-		MIT1002_02302	0.25	+0.5