Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02299

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 6
2,560,878	+		MIT1002_02297	0.89	+1.1
2,561,030	-				+0.5
2,561,032	+				-0.8
2,561,037	+				-1.4
2,561,052	-				-0.1
2,561,053	-				+2.3
2,561,064	-				+1.1
2,561,064	-				+1.1
2,561,264	-		MIT1002_02298	0.23	+0.9
2,561,297	-		MIT1002_02298	0.27	+0.6
2,561,305	+		MIT1002_02298	0.28	+1.6
2,561,313	-		MIT1002_02298	0.29	+0.7
2,561,313	-		MIT1002_02298	0.29	-1.2
2,561,313	-		MIT1002_02298	0.29	+1.6
2,561,352	+		MIT1002_02298	0.35	+1.9
2,561,399	+		MIT1002_02298	0.41	+2.1
2,561,459	-		MIT1002_02298	0.49	+2.8
2,561,463	+		MIT1002_02298	0.50	+1.9
2,561,463	+		MIT1002_02298	0.50	+2.3
2,561,513	+		MIT1002_02298	0.56	+1.2
2,561,536	+		MIT1002_02298	0.59	+1.7
2,561,544	-		MIT1002_02298	0.61	+0.5
2,561,587	+		MIT1002_02298	0.66	+1.7
2,561,592	+		MIT1002_02298	0.67	-0.0
2,561,600	-		MIT1002_02298	0.68	+2.5
2,561,620	-		MIT1002_02298	0.71	-1.5
2,561,624	+		MIT1002_02298	0.71	-1.6
2,561,647	-		MIT1002_02298	0.75	+0.2
2,561,647	-		MIT1002_02298	0.75	+1.2
2,561,652	-		MIT1002_02298	0.75	-1.4
2,561,662	+		MIT1002_02298	0.77	+0.9
2,561,703	+		MIT1002_02298	0.82	+2.2
2,561,743	+		MIT1002_02298	0.88	+1.4
2,561,743	+		MIT1002_02298	0.88	+1.3
2,561,751	-		MIT1002_02298	0.89	+1.0
2,561,751	-		MIT1002_02298	0.89	+1.4
2,561,793	-				+1.4
2,561,793	-				+0.7
2,561,794	-				+1.5
2,562,044	-		MIT1002_02299	0.19	-1.0
2,562,113	-		MIT1002_02299	0.27	-0.6
2,562,221	+		MIT1002_02299	0.39	+0.0
2,562,229	-		MIT1002_02299	0.39	-0.3
2,562,229	-		MIT1002_02299	0.39	-1.5
2,562,229	-		MIT1002_02299	0.39	-0.9
2,562,229	-		MIT1002_02299	0.39	-0.5
2,562,259	+		MIT1002_02299	0.43	-2.6
2,562,278	+		MIT1002_02299	0.45	-1.3
2,562,301	-		MIT1002_02299	0.47	-0.4
2,562,361	+		MIT1002_02299	0.54	-2.0
2,562,383	-		MIT1002_02299	0.56	-0.9
2,562,393	-		MIT1002_02299	0.57	+0.1
2,562,393	-		MIT1002_02299	0.57	-2.2
2,562,395	+		MIT1002_02299	0.58	+1.7
2,562,401	+		MIT1002_02299	0.58	+0.8
2,562,403	-		MIT1002_02299	0.58	+0.4
2,562,414	-		MIT1002_02299	0.60	+0.9
2,562,520	-		MIT1002_02299	0.71	-0.0
2,562,557	-		MIT1002_02299	0.75	+1.0
2,562,558	-		MIT1002_02299	0.75	+0.2
2,562,577	-		MIT1002_02299	0.77	+1.3
2,562,582	-		MIT1002_02299	0.78	-0.7
2,562,594	+		MIT1002_02299	0.79	+0.2
2,562,626	-		MIT1002_02299	0.83	+0.8
2,562,660	-		MIT1002_02299	0.86	-0.7
2,562,694	+				+0.0
2,562,704	-				-0.2
2,562,751	+				-0.3
2,562,773	-				-0.2
2,562,818	-				-3.2
2,562,818	-				+0.2
2,562,825	+				-0.7
2,562,833	-				+1.1
2,562,960	-		MIT1002_02300	0.23	-0.1
2,562,968	+		MIT1002_02300	0.25	+0.3
2,563,009	-		MIT1002_02300	0.36	-0.2
2,563,133	+		MIT1002_02300	0.67	-0.8
2,563,136	-		MIT1002_02300	0.68	+0.5
2,563,175	+		MIT1002_02300	0.78	+0.3
2,563,175	+		MIT1002_02300	0.78	-0.5
2,563,175	+		MIT1002_02300	0.78	-0.1
2,563,198	-		MIT1002_02300	0.84	+2.2
2,563,229	+				-2.1
2,563,242	-				-1.0
2,563,251	-				+1.0
2,563,492	+				-1.8
2,563,521	+				+1.3
2,563,577	-				-1.7