Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02234

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 6
2,495,761	+		MIT1002_02233	0.36	+1.5
2,495,763	+		MIT1002_02233	0.36	-0.6
2,495,768	+		MIT1002_02233	0.37	+1.0
2,495,818	-		MIT1002_02233	0.40	-0.8
2,495,818	-		MIT1002_02233	0.40	-0.7
2,495,827	+		MIT1002_02233	0.41	-1.3
2,495,827	+		MIT1002_02233	0.41	-0.6
2,495,969	+		MIT1002_02233	0.51	+0.2
2,496,041	-		MIT1002_02233	0.56	+1.0
2,496,077	+		MIT1002_02233	0.59	+0.5
2,496,097	+		MIT1002_02233	0.60	+0.6
2,496,218	+		MIT1002_02233	0.69	-0.8
2,496,226	-		MIT1002_02233	0.70	+0.1
2,496,257	-		MIT1002_02233	0.72	-0.4
2,496,292	+		MIT1002_02233	0.75	-0.2
2,496,313	+		MIT1002_02233	0.76	+0.2
2,496,313	+		MIT1002_02233	0.76	+0.8
2,496,316	+		MIT1002_02233	0.76	-0.6
2,496,316	+		MIT1002_02233	0.76	+0.4
2,496,316	+		MIT1002_02233	0.76	-2.1
2,496,316	+		MIT1002_02233	0.76	+0.2
2,496,324	-		MIT1002_02233	0.77	+1.0
2,496,324	-		MIT1002_02233	0.77	+0.4
2,496,324	-		MIT1002_02233	0.77	-2.1
2,496,324	-		MIT1002_02233	0.77	+1.6
2,496,405	-		MIT1002_02233	0.83	-0.0
2,496,407	+		MIT1002_02233	0.83	+0.6
2,496,415	-		MIT1002_02233	0.84	-1.0
2,496,455	+		MIT1002_02233	0.87	-0.8
2,496,463	-		MIT1002_02233	0.87	+1.5
2,496,541	+				-2.5
2,496,553	+				+0.7
2,496,581	+				-1.9
2,496,606	+				+0.3
2,496,611	+				+1.4
2,496,614	-				-0.0
2,496,621	-				+0.4
2,496,642	-				-0.4
2,496,642	-				-0.6
2,496,666	+				+0.3
2,496,717	+				+1.0
2,496,755	+				-0.4
2,496,755	+				+1.2
2,496,763	-				-0.8
2,496,763	-				-1.6
2,496,765	-				-1.3
2,496,809	-		MIT1002_02234	0.11	+0.5
2,496,827	+		MIT1002_02234	0.14	+0.5
2,497,067	-		MIT1002_02234	0.47	-0.8
2,497,129	+		MIT1002_02234	0.56	-0.7
2,497,182	+		MIT1002_02234	0.63	+0.2
2,497,204	+		MIT1002_02234	0.66	-0.2
2,497,271	+		MIT1002_02234	0.75	-2.5
2,497,279	-		MIT1002_02234	0.77	-0.5
2,497,283	+		MIT1002_02234	0.77	+0.3
2,497,291	-		MIT1002_02234	0.78	-0.9
2,497,291	-		MIT1002_02234	0.78	-0.3
2,497,295	+		MIT1002_02234	0.79	+0.2
2,497,308	+		MIT1002_02234	0.81	+0.8
2,497,326	-		MIT1002_02234	0.83	+0.8
2,497,328	+		MIT1002_02234	0.83	+1.0
2,497,328	+		MIT1002_02234	0.83	-0.8
2,497,328	+		MIT1002_02234	0.83	-0.9
2,497,336	-		MIT1002_02234	0.84	+0.4
2,497,493	-				-0.0
2,497,535	+				+0.7
2,497,627	+		MIT1002_02235	0.11	+0.4
2,497,680	+		MIT1002_02235	0.16	+0.9
2,497,680	+		MIT1002_02235	0.16	+2.7
2,497,690	+		MIT1002_02235	0.16	+0.5
2,497,702	+		MIT1002_02235	0.17	-1.8
2,497,702	+		MIT1002_02235	0.17	-0.1
2,497,703	-		MIT1002_02235	0.18	-0.5
2,497,767	+		MIT1002_02235	0.23	+1.8
2,497,849	+		MIT1002_02235	0.30	+0.5
2,497,857	-		MIT1002_02235	0.31	-0.3
2,497,953	-		MIT1002_02235	0.39	-0.1
2,497,956	-		MIT1002_02235	0.39	-1.8
2,498,047	+		MIT1002_02235	0.47	+0.7
2,498,130	-		MIT1002_02235	0.54	+0.7
2,498,243	-		MIT1002_02235	0.63	-0.3
2,498,390	-		MIT1002_02235	0.76	+2.0
2,498,392	+		MIT1002_02235	0.76	-0.0
2,498,400	-		MIT1002_02235	0.76	-0.6
2,498,439	+		MIT1002_02235	0.80	+1.0