Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02113

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 6
2,371,628	+		MIT1002_02111	0.30	-0.4
2,371,688	+		MIT1002_02111	0.37	+0.0
2,371,739	+		MIT1002_02111	0.42	-0.3
2,371,747	-		MIT1002_02111	0.43	-0.6
2,371,777	-		MIT1002_02111	0.46	-0.5
2,371,835	+		MIT1002_02111	0.52	+0.5
2,371,835	+		MIT1002_02111	0.52	+0.2
2,371,839	-		MIT1002_02111	0.53	-0.3
2,371,891	-		MIT1002_02111	0.58	+0.4
2,371,921	-		MIT1002_02111	0.62	+0.0
2,371,935	+		MIT1002_02111	0.63	+2.8
2,371,957	-		MIT1002_02111	0.65	+1.0
2,372,050	+		MIT1002_02111	0.75	+0.9
2,372,050	+		MIT1002_02111	0.75	+0.0
2,372,050	+		MIT1002_02111	0.75	-0.4
2,372,050	+		MIT1002_02111	0.75	+2.4
2,372,058	-		MIT1002_02111	0.76	+0.8
2,372,058	-		MIT1002_02111	0.76	-0.7
2,372,071	+		MIT1002_02111	0.78	-1.9
2,372,079	-		MIT1002_02111	0.79	-0.4
2,372,079	-		MIT1002_02111	0.79	-0.2
2,372,079	-		MIT1002_02111	0.79	+0.4
2,372,154	+		MIT1002_02111	0.87	-0.7
2,372,174	+		MIT1002_02111	0.89	-1.2
2,372,174	+		MIT1002_02111	0.89	-0.3
2,372,210	-				+2.0
2,372,290	-				-0.3
2,372,384	+		MIT1002_02112	0.41	+0.6
2,372,491	+		MIT1002_02112	0.88	+0.2
2,372,501	+				-0.8
2,372,503	+				-0.7
2,372,511	-				-0.9
2,372,518	+				-0.9
2,372,526	-				+1.0
2,372,526	-				+0.2
2,372,528	+				-0.4
2,372,528	+				+0.4
2,372,583	-				+0.5
2,372,718	+		MIT1002_02113	0.19	+0.5
2,372,719	+		MIT1002_02113	0.19	+2.5
2,372,967	+		MIT1002_02113	0.68	+0.0
2,372,977	+		MIT1002_02113	0.70	-2.2
2,372,977	+		MIT1002_02113	0.70	-0.1
2,372,977	+		MIT1002_02113	0.70	-0.5
2,372,977	+		MIT1002_02113	0.70	+0.3
2,372,977	+		MIT1002_02113	0.70	+2.8
2,372,977	+		MIT1002_02113	0.70	+0.2
2,372,977	+		MIT1002_02113	0.70	-1.1
2,372,977	+		MIT1002_02113	0.70	+1.0
2,372,977	+		MIT1002_02113	0.70	+0.6
2,372,977	+		MIT1002_02113	0.70	+0.2
2,372,977	+		MIT1002_02113	0.70	-0.8
2,372,977	+		MIT1002_02113	0.70	+0.4
2,372,985	-		MIT1002_02113	0.71	+1.0
2,372,985	-		MIT1002_02113	0.71	+0.7
2,372,985	-		MIT1002_02113	0.71	-0.8
2,372,985	-		MIT1002_02113	0.71	+0.8
2,372,985	-		MIT1002_02113	0.71	+2.2
2,372,985	-		MIT1002_02113	0.71	-3.6
2,372,989	-		MIT1002_02113	0.72	+0.6
2,372,994	-		MIT1002_02113	0.73	+1.3
2,373,038	-		MIT1002_02113	0.82	-0.1
2,373,126	-				+0.1
2,373,157	-				+0.5
2,373,157	-				+0.3
2,373,178	+				-1.3
2,373,240	-				+1.7
2,373,253	+				+1.0
2,373,262	-				+0.3
2,373,293	-		MIT1002_02114	0.12	-1.7
2,373,390	+		MIT1002_02114	0.19	-0.8
2,373,398	-		MIT1002_02114	0.19	+2.2
2,373,466	-		MIT1002_02114	0.24	+0.1
2,373,511	+		MIT1002_02114	0.28	+0.0
2,373,520	+		MIT1002_02114	0.28	+0.7
2,373,548	+		MIT1002_02114	0.30	+0.4
2,373,553	+		MIT1002_02114	0.31	-0.9
2,373,659	-		MIT1002_02114	0.38	+1.7
2,373,671	+		MIT1002_02114	0.39	-0.2
2,373,700	+		MIT1002_02114	0.41	-0.9
2,373,710	+		MIT1002_02114	0.42	+0.2
2,373,753	+		MIT1002_02114	0.45	-1.5
2,373,758	+		MIT1002_02114	0.45	+1.0
2,373,783	+		MIT1002_02114	0.47	+1.8
2,373,803	+		MIT1002_02114	0.49	+1.0
2,373,858	-		MIT1002_02114	0.53	-0.4
2,373,896	-		MIT1002_02114	0.55	-1.4
2,373,983	-		MIT1002_02114	0.62	+0.3
2,373,999	-		MIT1002_02114	0.63	+0.5
2,374,016	+		MIT1002_02114	0.64	-0.8
2,374,016	+		MIT1002_02114	0.64	+0.1
2,374,024	-		MIT1002_02114	0.65	+0.0