Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01983

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 6
2,217,772	+				+0.9
2,217,944	+		MIT1002_01983	0.14	-1.6
2,217,944	+		MIT1002_01983	0.14	-1.7
2,218,020	-		MIT1002_01983	0.21	-0.0
2,218,052	+		MIT1002_01983	0.24	+1.6
2,218,052	+		MIT1002_01983	0.24	-0.0
2,218,059	+		MIT1002_01983	0.25	-1.7
2,218,060	-		MIT1002_01983	0.25	+2.0
2,218,060	-		MIT1002_01983	0.25	+0.3
2,218,060	-		MIT1002_01983	0.25	-0.1
2,218,102	+		MIT1002_01983	0.29	-1.4
2,218,144	+		MIT1002_01983	0.33	-1.6
2,218,247	-		MIT1002_01983	0.42	+0.1
2,218,264	+		MIT1002_01983	0.43	-1.5
2,218,274	-		MIT1002_01983	0.44	-1.2
2,218,305	-		MIT1002_01983	0.47	+0.4
2,218,411	-		MIT1002_01983	0.57	-0.4
2,218,421	+		MIT1002_01983	0.58	-0.4
2,218,439	+		MIT1002_01983	0.59	-0.7
2,218,450	-		MIT1002_01983	0.60	-0.3
2,218,477	+		MIT1002_01983	0.63	-0.9
2,218,500	-		MIT1002_01983	0.65	-2.3
2,218,517	+		MIT1002_01983	0.66	-2.6
2,218,762	-		MIT1002_01983	0.88	+0.2
2,218,823	+				-1.1
2,218,857	+				+0.4
2,218,984	+				+1.0
2,218,994	+				-7.1
2,218,994	+				-2.4
2,218,994	+				-1.0
2,218,994	+				-4.3
2,218,994	+				-2.8
2,218,995	+				-1.8
2,219,002	-				-2.6
2,219,002	-				-1.9
2,219,083	+		MIT1002_01984	0.14	-0.7
2,219,159	-		MIT1002_01984	0.23	-1.8
2,219,182	-		MIT1002_01984	0.26	-3.2
2,219,182	-		MIT1002_01984	0.26	-1.3
2,219,206	-		MIT1002_01984	0.28	-4.3
2,219,374	-		MIT1002_01984	0.48	-2.4
2,219,374	-		MIT1002_01984	0.48	-0.9
2,219,469	-		MIT1002_01984	0.58	+0.7
2,219,526	+		MIT1002_01984	0.65	-3.0
2,219,526	+		MIT1002_01984	0.65	-2.4
2,219,526	+		MIT1002_01984	0.65	-3.6
2,219,526	+		MIT1002_01984	0.65	-3.0
2,219,526	+		MIT1002_01984	0.65	-1.7
2,219,534	-		MIT1002_01984	0.66	-3.2
2,219,534	-		MIT1002_01984	0.66	-1.4
2,219,534	-		MIT1002_01984	0.66	-0.3
2,219,546	-		MIT1002_01984	0.67	-0.6
2,219,552	+		MIT1002_01984	0.68	-2.0
2,219,598	+		MIT1002_01984	0.73	-3.0
2,219,605	+		MIT1002_01984	0.74	-0.8
2,219,720	-		MIT1002_01984	0.87	-1.3
2,219,875	+				-1.5