Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01908

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 6
2,118,104	+				-0.6
2,118,104	+				+0.4
2,118,112	-				-1.3
2,118,112	-				+0.6
2,118,143	+				+0.6
2,118,197	+		MIT1002_01907	0.12	+0.4
2,118,201	+		MIT1002_01907	0.13	+0.9
2,118,201	+		MIT1002_01907	0.13	+0.7
2,118,201	+		MIT1002_01907	0.13	-0.8
2,118,201	+		MIT1002_01907	0.13	-0.6
2,118,209	-		MIT1002_01907	0.13	+0.9
2,118,209	-		MIT1002_01907	0.13	+1.0
2,118,209	-		MIT1002_01907	0.13	-0.2
2,118,209	-		MIT1002_01907	0.13	-0.1
2,118,209	-		MIT1002_01907	0.13	+1.1
2,118,252	+		MIT1002_01907	0.18	-0.1
2,118,252	+		MIT1002_01907	0.18	-0.7
2,118,252	+		MIT1002_01907	0.18	+0.7
2,118,252	+		MIT1002_01907	0.18	+1.8
2,118,260	-		MIT1002_01907	0.19	-1.2
2,118,260	-		MIT1002_01907	0.19	+0.7
2,118,574	+		MIT1002_01907	0.52	-0.1
2,118,577	+		MIT1002_01907	0.52	+0.0
2,118,583	+		MIT1002_01907	0.53	-0.2
2,118,606	+		MIT1002_01907	0.56	-0.6
2,118,620	+		MIT1002_01907	0.57	-0.1
2,118,628	-		MIT1002_01907	0.58	-0.2
2,118,670	+		MIT1002_01907	0.62	-0.2
2,118,678	-		MIT1002_01907	0.63	+0.2
2,118,683	-		MIT1002_01907	0.64	-0.4
2,118,757	+		MIT1002_01907	0.72	-0.1
2,118,763	+		MIT1002_01907	0.72	+0.0
2,118,771	-		MIT1002_01907	0.73	-2.6
2,118,784	+		MIT1002_01907	0.74	-1.0
2,118,785	-		MIT1002_01907	0.75	+0.2
2,118,792	-		MIT1002_01907	0.75	-2.9
2,118,815	+		MIT1002_01907	0.78	-0.9
2,118,879	+		MIT1002_01907	0.85	-0.6
2,118,952	-				+0.6
2,118,966	+				+1.9
2,118,966	+				-0.8
2,118,967	-				-0.4
2,118,967	-				-0.2
2,119,010	-				+1.8
2,119,073	-				+0.3
2,119,104	+		MIT1002_01908	0.14	-1.3
2,119,164	+		MIT1002_01908	0.28	-0.1
2,119,189	+		MIT1002_01908	0.35	+0.7
2,119,195	+		MIT1002_01908	0.36	-1.0
2,119,200	+		MIT1002_01908	0.37	+0.1
2,119,208	-		MIT1002_01908	0.39	-0.3
2,119,247	+		MIT1002_01908	0.49	+0.0
2,119,265	+		MIT1002_01908	0.53	+2.3
2,119,273	-		MIT1002_01908	0.55	-1.7
2,119,328	+		MIT1002_01908	0.69	+0.7
2,119,336	-		MIT1002_01908	0.71	-0.4
2,119,338	+		MIT1002_01908	0.71	+1.0
2,119,341	-		MIT1002_01908	0.72	+0.3
2,119,341	-		MIT1002_01908	0.72	+0.3
2,119,370	-		MIT1002_01908	0.79	-0.7
2,119,370	-		MIT1002_01908	0.79	-0.1
2,119,427	-				+0.0
2,119,457	+				-0.1
2,119,457	-				-0.3
2,119,464	+				+0.8
2,119,465	-				-0.1
2,119,465	-				-0.5
2,119,465	-				+0.9
2,119,486	+				-1.8
2,119,486	-				+0.3
2,119,496	+		MIT1002_01909	0.12	-0.5
2,119,496	+		MIT1002_01909	0.12	+0.4
2,119,504	-		MIT1002_01909	0.16	+1.8
2,119,573	-		MIT1002_01909	0.47	+0.9
2,119,573	-		MIT1002_01909	0.47	-2.5
2,119,589	+		MIT1002_01909	0.54	-1.2
2,119,607	-		MIT1002_01909	0.62	-0.7
2,119,623	+		MIT1002_01909	0.69	-1.0
2,119,629	-		MIT1002_01909	0.72	+0.8
2,119,765	+		MIT1002_01910	0.20	-2.2
2,119,798	-		MIT1002_01910	0.33	+0.8
2,119,804	+		MIT1002_01910	0.35	+0.7
2,119,812	-		MIT1002_01910	0.38	-0.3
2,119,840	-		MIT1002_01910	0.49	+0.5
2,119,856	+		MIT1002_01910	0.55	+2.2
2,119,864	-		MIT1002_01910	0.58	+0.2
2,119,991	+				-0.0
2,119,998	+				+0.2
2,120,181	-		MIT1002_01911	0.30	+2.3
2,120,214	+		MIT1002_01911	0.36	-0.6
2,120,222	-		MIT1002_01911	0.37	+2.7
2,120,227	-		MIT1002_01911	0.38	-0.2
2,120,433	-		MIT1002_01911	0.76	+1.2