Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01783

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 6
1,981,235	+				-2.0
1,981,257	-				-0.9
1,981,260	-				+1.3
1,981,349	+				+0.3
1,981,357	-				-0.7
1,981,424	+				+0.7
1,981,607	+				+0.5
1,981,616	-				+1.3
1,981,741	-				+0.5
1,981,787	+				+0.0
1,981,805	-				-0.2
1,981,950	+				-1.3
1,981,952	-				-0.1
1,981,958	-				-0.4
1,981,999	-				-0.6
1,982,214	+				-0.8
1,982,296	+				-0.8
1,982,324	+				+0.6
1,982,371	-		MIT1002_01783	0.13	-1.8
1,982,371	-		MIT1002_01783	0.13	+1.1
1,982,404	+		MIT1002_01783	0.16	-0.5
1,982,404	+		MIT1002_01783	0.16	+1.5
1,982,411	+		MIT1002_01783	0.16	+0.1
1,982,476	-		MIT1002_01783	0.22	-0.8
1,982,641	+		MIT1002_01783	0.36	-0.5
1,982,656	+		MIT1002_01783	0.38	+1.6
1,982,734	+		MIT1002_01783	0.44	+0.4
1,982,734	+		MIT1002_01783	0.44	-1.6
1,982,734	+		MIT1002_01783	0.44	+1.1
1,982,734	+		MIT1002_01783	0.44	+0.4
1,982,734	+		MIT1002_01783	0.44	+2.3
1,982,734	+		MIT1002_01783	0.44	-0.4
1,982,742	-		MIT1002_01783	0.45	+2.8
1,982,742	-		MIT1002_01783	0.45	+0.3
1,982,742	-		MIT1002_01783	0.45	-0.7
1,982,742	-		MIT1002_01783	0.45	-2.3
1,982,742	-		MIT1002_01783	0.45	-0.1
1,982,742	-		MIT1002_01783	0.45	-0.8
1,982,771	+		MIT1002_01783	0.48	+0.9
1,982,779	-		MIT1002_01783	0.48	+1.6
1,982,779	-		MIT1002_01783	0.48	-0.1
1,982,779	-		MIT1002_01783	0.48	-1.1
1,982,841	-		MIT1002_01783	0.54	+0.6
1,982,897	-		MIT1002_01783	0.58	+0.5
1,982,934	-		MIT1002_01783	0.62	-0.5
1,983,031	-		MIT1002_01783	0.70	+1.0
1,983,040	-		MIT1002_01783	0.71	+0.4
1,983,054	+		MIT1002_01783	0.72	+1.2
1,983,121	+		MIT1002_01783	0.78	-0.7
1,983,177	+		MIT1002_01783	0.83	+0.2
1,983,231	-		MIT1002_01783	0.87	-1.5
1,983,243	-		MIT1002_01783	0.88	+0.4
1,983,269	-				-0.4
1,983,307	+				-0.4
1,983,307	+				-0.1
1,983,315	-				-0.2
1,983,343	-				+0.4
1,983,462	+				+0.4
1,983,529	-				+0.6
1,983,562	+				+0.2
1,983,612	+				-0.1
1,983,679	+				+2.5
1,983,679	+				-1.1
1,983,679	+				-0.1
1,983,679	+				-1.9
1,983,687	-				-1.3
1,983,714	+				-1.4
1,983,754	+		MIT1002_01784	0.15	+1.5
1,983,943	-		MIT1002_01784	0.48	-0.6
1,984,011	+		MIT1002_01784	0.60	-0.7
1,984,055	+		MIT1002_01784	0.68	-0.1
1,984,088	+		MIT1002_01784	0.74	-0.3
1,984,133	+		MIT1002_01784	0.82	-0.1
1,984,133	+		MIT1002_01784	0.82	-0.2
1,984,133	+		MIT1002_01784	0.82	+0.0
1,984,228	+				+0.3
1,984,236	-				+0.2
1,984,291	-				-0.2