Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01673

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 6
1,848,647	+		MIT1002_01672	0.18	-0.4
1,848,655	-		MIT1002_01672	0.19	+1.9
1,848,655	-		MIT1002_01672	0.19	-0.2
1,848,663	-		MIT1002_01672	0.20	+0.2
1,848,689	-		MIT1002_01672	0.22	-1.0
1,848,731	-		MIT1002_01672	0.25	-1.1
1,848,731	-		MIT1002_01672	0.25	-0.5
1,848,731	-		MIT1002_01672	0.25	-0.6
1,848,791	+		MIT1002_01672	0.30	-0.3
1,848,833	-		MIT1002_01672	0.33	+0.1
1,848,860	+		MIT1002_01672	0.36	+0.1
1,848,868	-		MIT1002_01672	0.36	-0.9
1,848,870	+		MIT1002_01672	0.37	-2.0
1,848,874	-		MIT1002_01672	0.37	-1.4
1,848,891	-		MIT1002_01672	0.38	+0.5
1,848,910	+		MIT1002_01672	0.40	-0.6
1,848,929	-		MIT1002_01672	0.41	+0.2
1,848,931	+		MIT1002_01672	0.41	-0.6
1,849,031	+		MIT1002_01672	0.50	-0.2
1,849,031	+		MIT1002_01672	0.50	+0.5
1,849,127	-		MIT1002_01672	0.57	-1.4
1,849,212	+		MIT1002_01672	0.64	+0.8
1,849,212	+		MIT1002_01672	0.64	+0.0
1,849,232	-		MIT1002_01672	0.66	-1.0
1,849,269	-		MIT1002_01672	0.69	-0.5
1,849,294	+		MIT1002_01672	0.71	+0.7
1,849,294	+		MIT1002_01672	0.71	+0.6
1,849,359	+		MIT1002_01672	0.76	+1.4
1,849,367	-		MIT1002_01672	0.77	-0.7
1,849,367	-		MIT1002_01672	0.77	+1.0
1,849,372	+		MIT1002_01672	0.77	-0.2
1,849,372	+		MIT1002_01672	0.77	+2.0
1,849,380	-		MIT1002_01672	0.78	+2.0
1,849,473	-		MIT1002_01672	0.86	-0.3
1,849,491	+		MIT1002_01672	0.87	+0.1
1,849,499	-		MIT1002_01672	0.88	+0.9
1,849,499	-		MIT1002_01672	0.88	-0.2
1,849,511	+		MIT1002_01672	0.89	+1.3
1,849,534	+				-0.6
1,849,542	-				-0.6
1,849,547	-				-0.1
1,849,587	+				+1.2
1,849,755	+				-1.7
1,849,762	+				-1.1
1,849,861	-		MIT1002_01673	0.18	-2.1
1,849,952	+		MIT1002_01673	0.25	+1.2
1,849,989	+		MIT1002_01673	0.28	+0.7
1,850,026	+		MIT1002_01673	0.31	+0.3
1,850,036	+		MIT1002_01673	0.32	-0.1
1,850,036	+		MIT1002_01673	0.32	-0.3
1,850,044	-		MIT1002_01673	0.33	+0.4
1,850,044	-		MIT1002_01673	0.33	-0.4
1,850,044	-		MIT1002_01673	0.33	+0.6
1,850,241	+		MIT1002_01673	0.49	-0.1
1,850,241	+		MIT1002_01673	0.49	+0.5
1,850,262	+		MIT1002_01673	0.50	+1.5
1,850,262	+		MIT1002_01673	0.50	+0.2
1,850,270	-		MIT1002_01673	0.51	+0.0
1,850,270	-		MIT1002_01673	0.51	+0.3
1,850,284	-		MIT1002_01673	0.52	-0.6
1,850,301	-		MIT1002_01673	0.53	+0.5
1,850,344	-		MIT1002_01673	0.57	+0.5
1,850,350	+		MIT1002_01673	0.57	+1.7
1,850,374	-		MIT1002_01673	0.59	-0.7
1,850,399	+		MIT1002_01673	0.61	+1.5
1,850,399	+		MIT1002_01673	0.61	-0.8
1,850,515	-		MIT1002_01673	0.71	-1.1
1,850,515	-		MIT1002_01673	0.71	+1.0
1,850,634	+		MIT1002_01673	0.80	-0.1
1,850,659	-		MIT1002_01673	0.82	-1.1
1,850,677	+		MIT1002_01673	0.84	-1.0
1,850,685	-		MIT1002_01673	0.85	+0.0
1,850,718	-		MIT1002_01673	0.87	-0.2
1,850,775	-				+1.9
1,850,793	+				-0.4
1,850,865	+				+0.7
1,850,949	-				-0.2
1,850,952	+				+0.9
1,850,960	-				+1.9
1,851,043	+				+0.2
1,851,051	-				-0.5
1,851,097	+				+0.0
1,851,102	+				-0.2
1,851,105	-				+0.7
1,851,107	+				+1.2
1,851,181	-		MIT1002_01674	0.12	-0.1
1,851,203	+		MIT1002_01674	0.14	-0.3
1,851,210	+		MIT1002_01674	0.14	-0.2
1,851,212	-		MIT1002_01674	0.14	+0.1
1,851,228	+		MIT1002_01674	0.15	-0.9
1,851,257	-		MIT1002_01674	0.18	-0.6
1,851,326	-		MIT1002_01674	0.22	-0.7
1,851,388	-		MIT1002_01674	0.27	-0.8
1,851,388	-		MIT1002_01674	0.27	-0.4
1,851,390	+		MIT1002_01674	0.27	+1.2
1,851,390	+		MIT1002_01674	0.27	-1.0
1,851,422	+		MIT1002_01674	0.29	+0.2
1,851,430	-		MIT1002_01674	0.30	+0.3
1,851,474	+		MIT1002_01674	0.33	+0.5
1,851,480	+		MIT1002_01674	0.33	+0.0
1,851,494	+		MIT1002_01674	0.34	-0.2
1,851,502	-		MIT1002_01674	0.35	-2.4
1,851,504	+		MIT1002_01674	0.35	-0.3
1,851,586	+		MIT1002_01674	0.41	-1.3
1,851,630	+		MIT1002_01674	0.44	-0.9
1,851,676	+		MIT1002_01674	0.47	-0.3
1,851,743	+		MIT1002_01674	0.52	-0.6
1,851,779	+		MIT1002_01674	0.55	+1.0
1,851,779	+		MIT1002_01674	0.55	+1.0