Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01665

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 6
1,838,757	-		MIT1002_01664	0.43	-1.6
1,838,879	-		MIT1002_01664	0.56	-0.9
1,838,900	+		MIT1002_01664	0.58	+1.4
1,838,922	-		MIT1002_01664	0.60	-0.3
1,839,051	+		MIT1002_01664	0.73	-2.2
1,839,075	-		MIT1002_01664	0.76	-0.4
1,839,104	+		MIT1002_01664	0.79	+1.4
1,839,367	+				+1.3
1,839,422	-				-1.9
1,839,593	+				-0.3
1,839,593	+				+0.7
1,839,593	+				+0.1
1,839,594	+				+0.7
1,839,601	-				+1.1
1,839,601	-				+0.0
1,839,601	-				-0.4
1,839,602	-				-0.5
1,839,619	-				+1.5
1,839,686	-				+2.0
1,839,726	+		MIT1002_01665	0.10	+1.2
1,839,759	+		MIT1002_01665	0.14	+2.3
1,839,812	-		MIT1002_01665	0.20	-0.5
1,839,818	+		MIT1002_01665	0.21	+1.7
1,839,825	-		MIT1002_01665	0.21	+2.5
1,839,838	+		MIT1002_01665	0.23	+0.7
1,839,861	+		MIT1002_01665	0.25	-0.3
1,839,880	-		MIT1002_01665	0.28	+2.2
1,839,965	+		MIT1002_01665	0.37	+2.3
1,840,007	+		MIT1002_01665	0.42	+2.7
1,840,037	+		MIT1002_01665	0.45	-0.4
1,840,052	+		MIT1002_01665	0.47	+2.3
1,840,055	-		MIT1002_01665	0.47	+2.8
1,840,092	+		MIT1002_01665	0.51	+0.6
1,840,154	-		MIT1002_01665	0.58	+2.4
1,840,225	+		MIT1002_01665	0.66	+2.4
1,840,225	+		MIT1002_01665	0.66	+1.7
1,840,225	+		MIT1002_01665	0.66	+0.6
1,840,233	-		MIT1002_01665	0.67	+1.1
1,840,235	-		MIT1002_01665	0.67	+0.1
1,840,276	+		MIT1002_01665	0.72	+1.2
1,840,276	+		MIT1002_01665	0.72	+0.7
1,840,283	-		MIT1002_01665	0.72	+2.0
1,840,284	-		MIT1002_01665	0.73	+1.1
1,840,402	+		MIT1002_01665	0.86	+0.8
1,840,545	-				-0.3
1,840,615	+				-0.9
1,840,631	-				-1.1
1,840,653	+				+0.5
1,840,679	+				-1.2
1,840,687	-				-2.0
1,840,703	+				-1.2
1,840,804	+		MIT1002_01666	0.13	+1.7
1,840,842	+		MIT1002_01666	0.15	-0.4
1,840,863	-		MIT1002_01666	0.16	+1.0
1,840,863	-		MIT1002_01666	0.16	-0.5
1,840,948	+		MIT1002_01666	0.21	+0.5
1,840,979	+		MIT1002_01666	0.22	-1.0
1,840,982	-		MIT1002_01666	0.22	-1.9
1,840,987	+		MIT1002_01666	0.22	+0.7
1,840,995	-		MIT1002_01666	0.23	-1.2
1,841,019	-		MIT1002_01666	0.24	-0.8
1,841,019	-		MIT1002_01666	0.24	+0.2
1,841,043	-		MIT1002_01666	0.25	-1.0
1,841,185	+		MIT1002_01666	0.32	-1.2
1,841,273	+		MIT1002_01666	0.37	+2.2
1,841,281	-		MIT1002_01666	0.37	-0.7
1,841,287	-		MIT1002_01666	0.37	-1.2
1,841,355	-		MIT1002_01666	0.41	-1.9
1,841,365	-		MIT1002_01666	0.41	-0.3
1,841,373	-		MIT1002_01666	0.42	-0.5
1,841,378	+		MIT1002_01666	0.42	+0.4
1,841,434	-		MIT1002_01666	0.45	-2.6
1,841,439	-		MIT1002_01666	0.45	-2.1