Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01642

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 6
1,811,105	+		MIT1002_01640	0.27	+0.9
1,811,112	-		MIT1002_01640	0.28	+0.4
1,811,113	-		MIT1002_01640	0.29	-0.3
1,811,122	-		MIT1002_01640	0.30	-2.2
1,811,127	-		MIT1002_01640	0.31	-0.4
1,811,127	-		MIT1002_01640	0.31	-1.3
1,811,173	+		MIT1002_01640	0.39	+0.1
1,811,173	+		MIT1002_01640	0.39	+0.3
1,811,173	+		MIT1002_01640	0.39	+0.1
1,811,173	+		MIT1002_01640	0.39	+0.5
1,811,181	-		MIT1002_01640	0.40	+0.5
1,811,181	-		MIT1002_01640	0.40	-0.3
1,811,239	-		MIT1002_01640	0.50	-0.2
1,811,325	-		MIT1002_01640	0.64	-0.6
1,811,396	-		MIT1002_01640	0.76	+0.5
1,811,398	+		MIT1002_01640	0.77	+0.1
1,811,406	-		MIT1002_01640	0.78	-0.9
1,811,406	-		MIT1002_01640	0.78	-1.9
1,811,445	+		MIT1002_01640	0.85	-1.8
1,811,445	+		MIT1002_01640	0.85	+1.1
1,811,453	-		MIT1002_01640	0.86	+0.5
1,811,453	-		MIT1002_01640	0.86	+0.4
1,811,488	+				-0.3
1,811,579	+				+0.7
1,811,587	-				+0.4
1,811,663	-		MIT1002_01641	0.14	+0.3
1,811,665	+		MIT1002_01641	0.14	-0.5
1,811,665	+		MIT1002_01641	0.14	-0.3
1,811,673	-		MIT1002_01641	0.16	+0.7
1,811,716	-		MIT1002_01641	0.25	-0.1
1,811,716	-		MIT1002_01641	0.25	-1.9
1,811,784	-		MIT1002_01641	0.40	-0.3
1,811,946	+		MIT1002_01641	0.74	+1.9
1,811,972	+		MIT1002_01641	0.80	-0.8
1,811,977	-		MIT1002_01641	0.81	-0.4
1,812,102	-				-1.4
1,812,112	+				-0.2
1,812,128	+				-2.1
1,812,219	+				-0.5
1,812,236	-				-0.9
1,812,286	+				+1.7
1,812,294	-				+0.5
1,812,387	-		MIT1002_01642	0.13	+1.1
1,812,404	-		MIT1002_01642	0.14	-1.3
1,812,425	+		MIT1002_01642	0.15	-0.8
1,812,433	-		MIT1002_01642	0.15	+1.9
1,812,433	-		MIT1002_01642	0.15	+1.6
1,812,500	-		MIT1002_01642	0.18	-0.3
1,812,515	+		MIT1002_01642	0.19	-0.4
1,812,560	-		MIT1002_01642	0.21	+0.5
1,812,560	-		MIT1002_01642	0.21	-1.0
1,812,570	-		MIT1002_01642	0.21	-0.5
1,812,570	-		MIT1002_01642	0.21	+0.1
1,812,572	+		MIT1002_01642	0.21	-0.6
1,812,578	-		MIT1002_01642	0.21	-0.3
1,812,578	-		MIT1002_01642	0.21	+0.1
1,812,578	-		MIT1002_01642	0.21	+0.5
1,812,578	-		MIT1002_01642	0.21	-1.5
1,812,588	-		MIT1002_01642	0.22	-0.4
1,812,660	+		MIT1002_01642	0.25	-0.5
1,812,701	-		MIT1002_01642	0.27	-1.0
1,812,758	+		MIT1002_01642	0.29	-0.3
1,812,758	+		MIT1002_01642	0.29	-1.6
1,812,828	+		MIT1002_01642	0.32	-1.7
1,812,836	-		MIT1002_01642	0.32	-0.3
1,812,836	-		MIT1002_01642	0.32	+1.0
1,812,923	+		MIT1002_01642	0.36	+0.1
1,812,987	+		MIT1002_01642	0.38	-0.9
1,813,060	+		MIT1002_01642	0.41	-0.1
1,813,149	-		MIT1002_01642	0.45	-0.1
1,813,154	-		MIT1002_01642	0.45	-2.7
1,813,216	+		MIT1002_01642	0.48	-0.4
1,813,237	-		MIT1002_01642	0.49	+2.2
1,813,340	-		MIT1002_01642	0.53	-0.7
1,813,346	-		MIT1002_01642	0.53	+1.5
1,813,372	-		MIT1002_01642	0.54	+1.5
1,813,382	-		MIT1002_01642	0.55	+0.3
1,813,484	-		MIT1002_01642	0.59	+1.9
1,813,533	-		MIT1002_01642	0.61	-0.0
1,813,540	+		MIT1002_01642	0.61	-0.1
1,813,589	+		MIT1002_01642	0.63	+2.0
1,813,597	-		MIT1002_01642	0.64	+0.7
1,813,629	+		MIT1002_01642	0.65	-1.0
1,813,629	+		MIT1002_01642	0.65	+0.4
1,813,637	+		MIT1002_01642	0.65	+0.3
1,813,637	+		MIT1002_01642	0.65	-0.2
1,813,637	-		MIT1002_01642	0.65	+0.7
1,813,639	+		MIT1002_01642	0.66	+0.6
1,813,645	-		MIT1002_01642	0.66	-0.5
1,813,647	-		MIT1002_01642	0.66	+1.1
1,813,654	+		MIT1002_01642	0.66	-0.1
1,813,684	+		MIT1002_01642	0.67	+0.9
1,813,692	-		MIT1002_01642	0.68	+0.3
1,813,735	+		MIT1002_01642	0.70	-2.4
1,813,737	+		MIT1002_01642	0.70	+1.2
1,813,737	+		MIT1002_01642	0.70	+0.4
1,813,739	+		MIT1002_01642	0.70	+0.2
1,813,745	-		MIT1002_01642	0.70	-0.2
1,813,762	-		MIT1002_01642	0.71	+0.4
1,813,863	-		MIT1002_01642	0.75	-0.4
1,813,866	-		MIT1002_01642	0.75	+0.2
1,813,866	-		MIT1002_01642	0.75	-0.1
1,813,877	+		MIT1002_01642	0.75	+0.9
1,813,877	+		MIT1002_01642	0.75	-0.1
1,813,885	-		MIT1002_01642	0.76	-0.5
1,814,063	+		MIT1002_01642	0.83	-1.3
1,814,201	+		MIT1002_01642	0.89	+0.5
1,814,317	+				-2.0
1,814,318	-				-2.0
1,814,378	+				+0.3
1,814,401	+				+0.9
1,814,409	-				-0.5
1,814,433	+				+0.9
1,814,643	-				-0.3
1,814,675	+		MIT1002_01643	0.12	+0.8
1,814,694	+		MIT1002_01643	0.14	+1.6
1,814,695	+		MIT1002_01643	0.14	+0.1
1,814,695	-		MIT1002_01643	0.14	-0.2
1,814,738	+		MIT1002_01643	0.18	+0.1
1,814,812	+		MIT1002_01643	0.25	+0.7
1,814,988	-		MIT1002_01643	0.43	+0.4
1,815,044	+		MIT1002_01643	0.48	-0.1
1,815,054	+		MIT1002_01643	0.49	+1.0
1,815,067	-		MIT1002_01643	0.50	+0.6
1,815,089	-		MIT1002_01643	0.52	+0.6
1,815,127	+		MIT1002_01643	0.56	+0.9
1,815,127	+		MIT1002_01643	0.56	+0.7
1,815,275	-		MIT1002_01643	0.71	+1.5
1,815,324	-		MIT1002_01643	0.75	+1.2
1,815,332	+		MIT1002_01643	0.76	-0.1
1,815,355	-		MIT1002_01643	0.78	-0.4
1,815,365	-		MIT1002_01643	0.79	-1.4
1,815,406	+		MIT1002_01643	0.83	+0.6
1,815,412	+		MIT1002_01643	0.84	-1.6
1,815,419	-		MIT1002_01643	0.85	+0.3
1,815,427	+		MIT1002_01643	0.85	+0.5
1,815,442	+		MIT1002_01643	0.87	-0.1
1,815,442	+		MIT1002_01643	0.87	-0.1
1,815,450	-		MIT1002_01643	0.88	-0.2