Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01623

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 6
1,787,761	+				-0.4
1,787,763	+				+0.0
1,787,776	+		MIT1002_01622	0.11	-0.2
1,787,776	+		MIT1002_01622	0.11	+1.8
1,787,776	+		MIT1002_01622	0.11	-0.8
1,787,776	+		MIT1002_01622	0.11	+0.1
1,787,784	-		MIT1002_01622	0.12	-0.2
1,787,909	+		MIT1002_01622	0.23	-0.1
1,787,956	-		MIT1002_01622	0.27	+0.5
1,787,963	-		MIT1002_01622	0.28	-1.8
1,787,963	-		MIT1002_01622	0.28	-0.1
1,787,963	-		MIT1002_01622	0.28	+0.1
1,788,023	-		MIT1002_01622	0.33	-0.6
1,788,055	-		MIT1002_01622	0.36	+0.8
1,788,101	+		MIT1002_01622	0.40	+0.2
1,788,109	-		MIT1002_01622	0.41	+0.8
1,788,179	-		MIT1002_01622	0.47	+1.1
1,788,296	+		MIT1002_01622	0.58	-1.3
1,788,304	-		MIT1002_01622	0.59	+0.3
1,788,304	-		MIT1002_01622	0.59	-1.8
1,788,304	-		MIT1002_01622	0.59	-1.3
1,788,315	+		MIT1002_01622	0.60	-1.3
1,788,323	-		MIT1002_01622	0.60	+1.1
1,788,376	+		MIT1002_01622	0.65	-0.5
1,788,376	+		MIT1002_01622	0.65	+0.7
1,788,440	+		MIT1002_01622	0.71	-0.0
1,788,440	+		MIT1002_01622	0.71	-0.6
1,788,440	+		MIT1002_01622	0.71	-0.7
1,788,448	-		MIT1002_01622	0.72	-1.7
1,788,474	+		MIT1002_01622	0.74	+1.2
1,788,482	-		MIT1002_01622	0.75	+0.7
1,788,490	-		MIT1002_01622	0.75	+0.1
1,788,490	-		MIT1002_01622	0.75	-0.4
1,788,500	+		MIT1002_01622	0.76	+0.2
1,788,500	+		MIT1002_01622	0.76	+0.3
1,788,500	+		MIT1002_01622	0.76	-0.2
1,788,503	-		MIT1002_01622	0.76	-1.1
1,788,508	-		MIT1002_01622	0.77	+2.0
1,788,508	-		MIT1002_01622	0.77	-0.6
1,788,512	-		MIT1002_01622	0.77	-0.5
1,788,569	+		MIT1002_01622	0.82	-1.2
1,788,582	+		MIT1002_01622	0.84	+1.6
1,788,582	+		MIT1002_01622	0.84	-0.3
1,788,587	+		MIT1002_01622	0.84	+1.2
1,788,590	-		MIT1002_01622	0.84	-0.1
1,788,590	-		MIT1002_01622	0.84	+1.0
1,788,613	+		MIT1002_01622	0.86	-0.9
1,788,639	+		MIT1002_01622	0.89	-1.2
1,788,697	-				-0.2
1,788,698	+				+0.5
1,788,749	-				-0.9
1,788,790	-				+0.9
1,788,847	-				+0.9
1,788,890	-		MIT1002_01623	0.15	+3.1
1,788,918	-		MIT1002_01623	0.18	-2.7
1,788,940	-		MIT1002_01623	0.21	-2.5
1,788,940	-		MIT1002_01623	0.21	+0.8
1,789,054	+		MIT1002_01623	0.34	+0.0
1,789,081	+		MIT1002_01623	0.37	+1.4
1,789,086	+		MIT1002_01623	0.37	-0.5
1,789,094	-		MIT1002_01623	0.38	+0.3
1,789,150	+		MIT1002_01623	0.45	+1.5
1,789,205	+		MIT1002_01623	0.51	+0.6
1,789,253	-		MIT1002_01623	0.57	+1.1
1,789,275	+		MIT1002_01623	0.59	+1.3
1,789,276	-		MIT1002_01623	0.59	-0.8
1,789,418	-		MIT1002_01623	0.76	-1.2
1,789,424	-		MIT1002_01623	0.76	+1.4
1,789,471	+		MIT1002_01623	0.82	-0.1
1,789,594	+				-0.7
1,789,594	+				-1.8
1,789,602	-				-0.9
1,789,609	-				+0.4
1,789,609	-				-1.8
1,789,609	-				+0.2
1,789,625	-				-0.6
1,789,819	+		MIT1002_01624	0.15	+0.8
1,789,831	+		MIT1002_01624	0.17	+0.1
1,790,025	-		MIT1002_01624	0.39	-0.5
1,790,068	-		MIT1002_01624	0.44	-0.8
1,790,078	+		MIT1002_01624	0.45	+0.8
1,790,080	+		MIT1002_01624	0.45	-0.6
1,790,123	-		MIT1002_01624	0.50	-0.7
1,790,207	+		MIT1002_01624	0.59	-0.2
1,790,231	-		MIT1002_01624	0.62	+0.5
1,790,256	+		MIT1002_01624	0.65	+0.4
1,790,401	-		MIT1002_01624	0.81	+1.9
1,790,412	-		MIT1002_01624	0.83	-0.2
1,790,438	-		MIT1002_01624	0.86	+1.7
1,790,487	+				-1.0
1,790,551	+				+1.5
1,790,619	-				+1.4