Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01532

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 6
1,682,599	+		MIT1002_01531	0.16	-0.7
1,682,600	+		MIT1002_01531	0.16	-0.2
1,682,600	+		MIT1002_01531	0.16	-0.1
1,682,615	+		MIT1002_01531	0.17	-1.0
1,682,630	+		MIT1002_01531	0.19	-0.8
1,682,781	-		MIT1002_01531	0.32	-1.0
1,682,788	+		MIT1002_01531	0.33	+0.1
1,682,859	-		MIT1002_01531	0.39	+2.7
1,682,859	-		MIT1002_01531	0.39	-0.3
1,682,875	-		MIT1002_01531	0.40	-2.4
1,682,879	+		MIT1002_01531	0.41	-1.3
1,682,879	+		MIT1002_01531	0.41	+1.1
1,682,887	-		MIT1002_01531	0.41	-1.9
1,682,937	+		MIT1002_01531	0.46	-0.8
1,682,992	+		MIT1002_01531	0.51	-1.8
1,683,034	+		MIT1002_01531	0.54	-1.8
1,683,036	-		MIT1002_01531	0.55	-0.5
1,683,084	+		MIT1002_01531	0.59	-0.6
1,683,111	+		MIT1002_01531	0.61	+0.6
1,683,219	+		MIT1002_01531	0.71	-1.2
1,683,237	-		MIT1002_01531	0.72	-1.6
1,683,258	+		MIT1002_01531	0.74	-0.1
1,683,296	+		MIT1002_01531	0.78	+0.3
1,683,296	+		MIT1002_01531	0.78	-0.4
1,683,296	+		MIT1002_01531	0.78	+0.6
1,683,296	+		MIT1002_01531	0.78	+0.0
1,683,296	+		MIT1002_01531	0.78	-1.8
1,683,304	-		MIT1002_01531	0.78	+0.8
1,683,306	+		MIT1002_01531	0.78	+0.5
1,683,306	+		MIT1002_01531	0.78	-1.1
1,683,306	+		MIT1002_01531	0.78	-0.3
1,683,314	-		MIT1002_01531	0.79	-2.1
1,683,314	-		MIT1002_01531	0.79	-1.9
1,683,314	-		MIT1002_01531	0.79	-0.6
1,683,314	-		MIT1002_01531	0.79	-1.3
1,683,314	-		MIT1002_01531	0.79	-0.8
1,683,325	+		MIT1002_01531	0.80	-1.3
1,683,424	+		MIT1002_01531	0.89	-0.6
1,683,472	-				-4.1
1,683,506	+				+1.0
1,683,552	+				+0.7
1,683,557	-				-0.9
1,683,559	+				-2.8
1,683,559	+				-1.5
1,683,559	+				-0.9
1,683,559	+				-0.2
1,683,559	+				+0.6
1,683,559	+				-0.4
1,683,559	+				+0.8
1,683,559	+				+0.2
1,683,559	+				-0.6
1,683,567	-				-1.8
1,683,567	-				-0.7
1,683,600	+				-1.3
1,683,630	+				-2.2
1,683,687	+		MIT1002_01532	0.11	-2.6
1,683,687	+		MIT1002_01532	0.11	-0.8
1,683,732	-		MIT1002_01532	0.15	-1.2
1,683,774	+		MIT1002_01532	0.20	+0.8
1,683,781	+		MIT1002_01532	0.21	+0.6
1,683,805	-		MIT1002_01532	0.23	-0.1
1,683,814	-		MIT1002_01532	0.24	-1.1
1,683,826	-		MIT1002_01532	0.25	+0.7
1,683,889	+		MIT1002_01532	0.32	-0.4
1,683,889	+		MIT1002_01532	0.32	-0.4
1,683,889	+		MIT1002_01532	0.32	-0.2
1,683,897	-		MIT1002_01532	0.33	-0.5
1,683,906	+		MIT1002_01532	0.34	-0.9
1,683,957	+		MIT1002_01532	0.39	-0.9
1,683,965	-		MIT1002_01532	0.40	-1.5
1,684,007	+		MIT1002_01532	0.44	-0.5
1,684,007	+		MIT1002_01532	0.44	+0.4
1,684,061	+		MIT1002_01532	0.50	+0.1
1,684,081	+		MIT1002_01532	0.52	-0.8
1,684,117	+		MIT1002_01532	0.56	-1.1
1,684,125	-		MIT1002_01532	0.57	-0.8
1,684,125	-		MIT1002_01532	0.57	+0.8
1,684,166	+		MIT1002_01532	0.61	+0.1
1,684,166	+		MIT1002_01532	0.61	+0.8
1,684,174	-		MIT1002_01532	0.62	-0.2
1,684,192	+		MIT1002_01532	0.64	+0.1
1,684,394	+		MIT1002_01532	0.85	-0.7
1,684,402	-		MIT1002_01532	0.86	-1.9
1,684,402	-		MIT1002_01532	0.86	-1.3
1,684,451	-				-0.8
1,684,548	+				+0.0
1,684,562	+				-0.1
1,684,562	+				+0.6
1,684,562	+				+0.4
1,684,562	+				-0.9
1,684,570	-				+0.7
1,684,574	+				+0.4
1,684,582	-				-1.5
1,684,582	-				+0.5
1,684,582	-				+0.1
1,684,582	-				+0.1
1,684,582	-				-0.7
1,684,634	+				+1.3
1,684,683	-				+0.5
1,684,684	-				+1.4
1,684,709	+				-0.8
1,684,802	-				+0.0
1,684,985	-				-2.3
1,685,010	-				-0.0
1,685,124	+		MIT1002_01533	0.11	-0.4
1,685,169	-		MIT1002_01533	0.17	-2.0
1,685,171	-		MIT1002_01533	0.17	-0.9
1,685,223	-		MIT1002_01533	0.24	-1.4
1,685,297	-		MIT1002_01533	0.33	+0.0
1,685,302	-		MIT1002_01533	0.34	+1.5
1,685,307	+		MIT1002_01533	0.35	-1.6
1,685,338	-		MIT1002_01533	0.39	-1.5