Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01365

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 6
1,513,279	+		MIT1002_01364	0.69	+0.5
1,513,309	+		MIT1002_01364	0.70	+1.3
1,513,435	+		MIT1002_01364	0.74	-2.5
1,513,486	+		MIT1002_01364	0.75	+1.0
1,513,493	+		MIT1002_01364	0.76	+0.9
1,513,551	+		MIT1002_01364	0.77	-0.1
1,513,580	+		MIT1002_01364	0.78	-0.8
1,513,596	+		MIT1002_01364	0.79	-1.7
1,513,596	+		MIT1002_01364	0.79	+1.0
1,513,596	+		MIT1002_01364	0.79	+3.5
1,513,601	+		MIT1002_01364	0.79	-0.5
1,513,604	-		MIT1002_01364	0.79	+0.6
1,513,604	-		MIT1002_01364	0.79	+2.1
1,513,604	-		MIT1002_01364	0.79	-0.0
1,513,754	-		MIT1002_01364	0.84	+0.8
1,513,817	+		MIT1002_01364	0.86	+0.9
1,513,881	+		MIT1002_01364	0.88	+2.3
1,514,077	-				-1.2
1,514,096	-				-1.1
1,514,248	-				-0.4
1,514,320	+				+1.1
1,514,320	+				+0.8
1,514,326	-				+2.0
1,514,352	+				+0.2
1,514,368	-				+1.7
1,514,424	+		MIT1002_01365	0.12	+0.1
1,514,432	-		MIT1002_01365	0.13	+1.2
1,514,492	+		MIT1002_01365	0.18	-0.6
1,514,492	+		MIT1002_01365	0.18	+0.2
1,514,492	+		MIT1002_01365	0.18	+1.4
1,514,492	+		MIT1002_01365	0.18	-0.2
1,514,492	+		MIT1002_01365	0.18	-0.4
1,514,492	+		MIT1002_01365	0.18	-0.4
1,514,499	+		MIT1002_01365	0.18	+0.5
1,514,500	-		MIT1002_01365	0.18	+1.4
1,514,500	-		MIT1002_01365	0.18	+1.0
1,514,500	-		MIT1002_01365	0.18	-1.3
1,514,500	-		MIT1002_01365	0.18	-0.9
1,514,500	-		MIT1002_01365	0.18	+0.9
1,514,515	-		MIT1002_01365	0.19	-0.7
1,514,515	-		MIT1002_01365	0.19	+0.9
1,514,642	-		MIT1002_01365	0.30	+0.9
1,514,662	+		MIT1002_01365	0.31	+0.1
1,514,726	+		MIT1002_01365	0.36	-2.4
1,514,750	+		MIT1002_01365	0.38	+1.1
1,514,795	+		MIT1002_01365	0.42	-0.5
1,514,803	-		MIT1002_01365	0.43	+1.0
1,514,884	+		MIT1002_01365	0.49	+0.4
1,514,968	-		MIT1002_01365	0.56	+3.0
1,514,968	-		MIT1002_01365	0.56	+0.5
1,514,977	+		MIT1002_01365	0.57	+1.8
1,514,984	-		MIT1002_01365	0.57	+1.1
1,515,059	-		MIT1002_01365	0.64	+2.0
1,515,145	-		MIT1002_01365	0.70	+1.0
1,515,225	+		MIT1002_01365	0.77	+0.8
1,515,225	-		MIT1002_01365	0.77	-0.7
1,515,367	+		MIT1002_01365	0.88	+0.1
1,515,460	+				-2.2
1,515,460	+				+1.0
1,515,629	-				+1.6
1,515,672	+				+1.5
1,515,704	+		MIT1002_01366	0.13	+0.4
1,515,712	-		MIT1002_01366	0.13	+0.2
1,515,759	+		MIT1002_01366	0.17	+1.0
1,515,759	+		MIT1002_01366	0.17	+1.1
1,515,767	-		MIT1002_01366	0.18	-0.0
1,515,810	-		MIT1002_01366	0.22	-0.9
1,515,817	+		MIT1002_01366	0.23	-0.3
1,515,836	-		MIT1002_01366	0.24	-0.7
1,515,849	-		MIT1002_01366	0.26	+0.2
1,515,849	-		MIT1002_01366	0.26	-1.8
1,515,939	-		MIT1002_01366	0.34	-0.6
1,515,976	-		MIT1002_01366	0.37	-0.4
1,516,027	+		MIT1002_01366	0.41	+0.0
1,516,069	-		MIT1002_01366	0.45	+0.0
1,516,209	+		MIT1002_01366	0.58	+0.7
1,516,209	+		MIT1002_01366	0.58	-1.0
1,516,217	-		MIT1002_01366	0.59	+1.5
1,516,258	+		MIT1002_01366	0.62	-2.2
1,516,266	-		MIT1002_01366	0.63	+0.0
1,516,395	-		MIT1002_01366	0.74	+1.0
1,516,413	+		MIT1002_01366	0.76	+0.1
1,516,421	+		MIT1002_01366	0.77	-0.1
1,516,448	-		MIT1002_01366	0.79	-0.4
1,516,460	-		MIT1002_01366	0.80	+0.9
1,516,481	-		MIT1002_01366	0.82	+1.2
1,516,495	-		MIT1002_01366	0.83	-0.5
1,516,501	+		MIT1002_01366	0.84	+0.2