Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01246

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 6
1,373,145	-				+1.4
1,373,147	-				+0.9
1,373,154	+				-0.2
1,373,154	+				-1.1
1,373,162	-				-0.5
1,373,168	+				-0.2
1,373,240	+				+0.7
1,373,240	+				+0.6
1,373,240	+				-1.6
1,373,248	-				-0.8
1,373,411	+		MIT1002_01245	0.11	-0.4
1,373,411	+		MIT1002_01245	0.11	-0.0
1,373,448	-		MIT1002_01245	0.20	-2.6
1,373,458	-		MIT1002_01245	0.22	-0.1
1,373,482	-		MIT1002_01245	0.29	+1.1
1,373,547	+		MIT1002_01245	0.45	+0.0
1,373,553	+		MIT1002_01245	0.46	+0.0
1,373,561	-		MIT1002_01245	0.48	-0.8
1,373,561	-		MIT1002_01245	0.48	-1.5
1,373,561	-		MIT1002_01245	0.48	+0.2
1,373,596	+		MIT1002_01245	0.57	+0.8
1,373,604	-		MIT1002_01245	0.59	+0.1
1,373,649	+		MIT1002_01245	0.71	-0.9
1,373,703	+		MIT1002_01245	0.84	-0.4
1,373,703	+		MIT1002_01245	0.84	+0.6
1,373,703	+		MIT1002_01245	0.84	+0.5
1,373,869	-				-0.3
1,373,900	-				-1.4
1,373,920	+				+0.3
1,373,930	+				+0.6
1,373,930	+				+1.2
1,373,933	+				-2.0
1,373,938	-				-0.6
1,374,027	+				-0.8
1,374,171	+		MIT1002_01246	0.20	+0.6
1,374,171	+		MIT1002_01246	0.20	+0.2
1,374,171	+		MIT1002_01246	0.20	-1.1
1,374,200	+		MIT1002_01246	0.24	-0.5
1,374,265	+		MIT1002_01246	0.33	-0.5
1,374,271	-		MIT1002_01246	0.34	-0.1
1,374,278	-		MIT1002_01246	0.35	+0.6
1,374,287	-		MIT1002_01246	0.36	+0.0
1,374,323	-		MIT1002_01246	0.41	+0.5
1,374,344	+		MIT1002_01246	0.44	+1.1
1,374,367	+		MIT1002_01246	0.47	-0.6
1,374,396	+		MIT1002_01246	0.51	+1.1
1,374,491	-		MIT1002_01246	0.65	-0.6
1,374,494	+		MIT1002_01246	0.65	-0.9
1,374,517	+		MIT1002_01246	0.68	-2.3
1,374,530	-		MIT1002_01246	0.70	+2.3
1,374,532	+		MIT1002_01246	0.70	+0.7
1,374,566	+		MIT1002_01246	0.75	-0.5
1,374,574	-		MIT1002_01246	0.76	+0.9
1,374,588	+		MIT1002_01246	0.78	+0.7
1,374,588	+		MIT1002_01246	0.78	+0.9
1,374,588	+		MIT1002_01246	0.78	-0.6
1,374,588	+		MIT1002_01246	0.78	+0.3
1,374,588	+		MIT1002_01246	0.78	+1.2
1,374,588	+		MIT1002_01246	0.78	-1.3
1,374,588	+		MIT1002_01246	0.78	-0.3
1,374,588	+		MIT1002_01246	0.78	+0.6
1,374,596	-		MIT1002_01246	0.79	-0.0
1,374,596	-		MIT1002_01246	0.79	+0.1
1,374,596	-		MIT1002_01246	0.79	+0.2
1,374,596	-		MIT1002_01246	0.79	-0.8
1,374,596	-		MIT1002_01246	0.79	+1.1
1,374,604	-		MIT1002_01246	0.81	+1.4
1,374,611	+		MIT1002_01246	0.82	+1.4
1,374,632	+		MIT1002_01246	0.85	-0.8
1,374,636	+		MIT1002_01246	0.85	-0.7
1,374,689	-				-0.5
1,374,775	-				+0.5
1,374,813	-				+1.5
1,374,908	+				-2.2
1,374,908	+				-0.4
1,374,916	-				+0.6
1,374,931	+				-1.7
1,374,931	+				+0.1
1,374,931	+				-1.5
1,374,931	+				-0.5
1,374,931	+				+1.8
1,374,931	+				+0.5
1,374,931	+				-1.8
1,374,931	+				+0.9
1,374,939	-				+0.6
1,374,939	-				+0.7
1,374,939	-				+0.6
1,374,939	-				-3.1
1,374,939	-				-0.6
1,374,939	-				+0.5
1,374,939	-				-1.1
1,374,939	-				+0.6
1,374,939	-				+0.5
1,374,939	-				-0.9
1,374,949	-				-0.5
1,374,949	-				-1.0
1,374,995	-				-0.7
1,374,997	+				-0.3
1,375,092	+				-0.7
1,375,092	+				-2.2
1,375,099	+		MIT1002_01248	0.11	+0.4
1,375,099	+		MIT1002_01248	0.11	-0.1
1,375,100	-		MIT1002_01248	0.12	+0.4
1,375,102	-		MIT1002_01248	0.13	-0.5
1,375,290	+				+3.2
1,375,298	-				-0.9
1,375,300	+				+0.7
1,375,308	-				-0.0
1,375,327	-				+0.5
1,375,364	+				-0.4
1,375,369	+				-1.6
1,375,372	-				-0.5
1,375,488	-		MIT1002_01249	0.18	+1.9
1,375,579	-		MIT1002_01249	0.68	-0.0
1,375,597	-		MIT1002_01249	0.78	-0.8
1,375,673	+				+1.9
1,375,689	+				-0.3
1,375,734	+				+0.3
1,375,739	+				-0.4
1,375,739	+				-0.1