Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01081

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 6
1,187,131	-		MIT1002_01080	0.13	-0.4
1,187,206	-		MIT1002_01080	0.22	+0.2
1,187,343	+		MIT1002_01080	0.39	+1.2
1,187,343	+		MIT1002_01080	0.39	-1.1
1,187,343	+		MIT1002_01080	0.39	-1.3
1,187,343	+		MIT1002_01080	0.39	+1.8
1,187,351	-		MIT1002_01080	0.40	+1.9
1,187,351	-		MIT1002_01080	0.40	-0.3
1,187,351	-		MIT1002_01080	0.40	+0.2
1,187,399	-		MIT1002_01080	0.46	+2.4
1,187,399	-		MIT1002_01080	0.46	+0.4
1,187,493	+		MIT1002_01080	0.58	+0.2
1,187,512	+		MIT1002_01080	0.60	+0.5
1,187,512	+		MIT1002_01080	0.60	+0.9
1,187,512	+		MIT1002_01080	0.60	-0.1
1,187,512	+		MIT1002_01080	0.60	+3.1
1,187,515	-		MIT1002_01080	0.61	-0.3
1,187,520	-		MIT1002_01080	0.61	-2.1
1,187,520	-		MIT1002_01080	0.61	+1.0
1,187,520	-		MIT1002_01080	0.61	-0.2
1,187,545	+		MIT1002_01080	0.64	-0.5
1,187,617	+		MIT1002_01080	0.73	+0.2
1,187,625	-		MIT1002_01080	0.74	+0.3
1,187,630	-		MIT1002_01080	0.75	+0.3
1,187,636	-		MIT1002_01080	0.76	-0.2
1,187,708	+		MIT1002_01080	0.85	-0.3
1,187,708	+		MIT1002_01080	0.85	+0.6
1,187,729	+		MIT1002_01080	0.87	-1.3
1,187,952	+				+0.4
1,188,022	+				+2.2
1,188,022	+				-0.9
1,188,096	-				-0.5
1,188,124	-				-0.6
1,188,270	+		MIT1002_01081	0.19	-0.2
1,188,270	+		MIT1002_01081	0.19	-1.6
1,188,270	+		MIT1002_01081	0.19	-1.2
1,188,278	-		MIT1002_01081	0.19	-0.3
1,188,278	-		MIT1002_01081	0.19	+0.4
1,188,283	-		MIT1002_01081	0.20	+1.3
1,188,327	+		MIT1002_01081	0.23	+0.3
1,188,349	-		MIT1002_01081	0.24	-0.6
1,188,453	+		MIT1002_01081	0.31	-0.5
1,188,486	-		MIT1002_01081	0.34	+0.2
1,188,530	-		MIT1002_01081	0.37	+0.1
1,188,575	+		MIT1002_01081	0.40	+1.6
1,188,727	+		MIT1002_01081	0.50	-2.4
1,188,727	+		MIT1002_01081	0.50	+0.7
1,188,735	-		MIT1002_01081	0.51	-1.0
1,188,737	+		MIT1002_01081	0.51	+1.8
1,188,756	+		MIT1002_01081	0.52	+0.7
1,188,886	+		MIT1002_01081	0.61	-0.1
1,188,886	+		MIT1002_01081	0.61	+0.6
1,188,894	-		MIT1002_01081	0.61	-1.4
1,188,909	+		MIT1002_01081	0.62	-2.7
1,188,948	+		MIT1002_01081	0.65	-0.9
1,188,962	+		MIT1002_01081	0.66	-2.7
1,188,962	+		MIT1002_01081	0.66	+2.1
1,188,970	-		MIT1002_01081	0.67	-2.4
1,189,000	+		MIT1002_01081	0.69	-0.5
1,189,008	-		MIT1002_01081	0.69	-0.0
1,189,075	-		MIT1002_01081	0.74	+0.0
1,189,085	-		MIT1002_01081	0.75	+1.8
1,189,085	-		MIT1002_01081	0.75	-0.8
1,189,123	+		MIT1002_01081	0.77	-1.1
1,189,123	+		MIT1002_01081	0.77	-0.0
1,189,123	+		MIT1002_01081	0.77	+0.1
1,189,131	-		MIT1002_01081	0.78	+0.2
1,189,131	-		MIT1002_01081	0.78	-2.3
1,189,177	-		MIT1002_01081	0.81	-0.3
1,189,256	-		MIT1002_01081	0.86	+0.9
1,189,304	+		MIT1002_01081	0.89	+0.9
1,189,349	-				-0.4
1,189,349	-				+1.9
1,189,399	+				+1.4
1,189,407	-				-0.2
1,189,407	-				+2.0
1,189,441	+				-0.3
1,189,460	-				-0.9
1,189,587	+				-0.1
1,189,612	+				-2.2
1,189,613	-				-1.1
1,189,614	+				+0.5
1,189,621	+				-1.3
1,189,626	+				-0.9
1,189,629	-				+0.1
1,189,629	-				+3.2
1,189,629	-				-1.1
1,189,629	-				+0.4
1,189,641	-				-2.7
1,189,641	-				-2.5
1,189,681	+				+0.4
1,189,698	-				+0.2
1,189,700	+				-1.4
1,189,736	+		MIT1002_01082	0.12	+1.2
1,189,738	+		MIT1002_01082	0.13	-1.9
1,189,756	-		MIT1002_01082	0.14	+0.9
1,189,873	-		MIT1002_01082	0.24	-0.8
1,189,873	-		MIT1002_01082	0.24	-0.9
1,189,880	+		MIT1002_01082	0.25	-0.3
1,189,888	-		MIT1002_01082	0.26	-0.9
1,189,888	-		MIT1002_01082	0.26	-2.8
1,189,888	-		MIT1002_01082	0.26	-1.2
1,189,888	-		MIT1002_01082	0.26	-0.6
1,189,888	-		MIT1002_01082	0.26	+0.6
1,189,888	-		MIT1002_01082	0.26	+0.6
1,189,895	-		MIT1002_01082	0.26	-0.9
1,190,030	+		MIT1002_01082	0.38	-0.1
1,190,038	-		MIT1002_01082	0.39	+0.3
1,190,038	-		MIT1002_01082	0.39	-0.1
1,190,107	+		MIT1002_01082	0.45	+0.4
1,190,107	+		MIT1002_01082	0.45	-1.3
1,190,115	-		MIT1002_01082	0.46	-0.4
1,190,189	+		MIT1002_01082	0.52	+1.5
1,190,197	-		MIT1002_01082	0.53	-0.3
1,190,197	-		MIT1002_01082	0.53	+0.1
1,190,211	+		MIT1002_01082	0.54	-1.2
1,190,226	+		MIT1002_01082	0.55	-0.1
1,190,305	+		MIT1002_01082	0.62	-1.3
1,190,381	+		MIT1002_01082	0.69	-0.2