Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01078

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 6
1,183,706	-		MIT1002_01076	0.88	-0.9
1,183,726	-				+0.9
1,183,752	-				-1.6
1,183,930	+				+0.4
1,183,937	+				+1.5
1,183,939	+				-0.9
1,183,939	-				+1.6
1,183,949	+				+0.1
1,183,957	-				-0.0
1,183,957	-				-0.2
1,183,995	-		MIT1002_01077	0.15	-0.5
1,184,071	-		MIT1002_01077	0.26	+1.0
1,184,074	+		MIT1002_01077	0.26	+0.2
1,184,132	+		MIT1002_01077	0.35	+0.0
1,184,137	+		MIT1002_01077	0.36	+1.3
1,184,147	-		MIT1002_01077	0.37	+0.9
1,184,203	-		MIT1002_01077	0.45	+0.4
1,184,226	+		MIT1002_01077	0.49	+1.2
1,184,231	+		MIT1002_01077	0.49	+0.9
1,184,234	-		MIT1002_01077	0.50	-0.8
1,184,257	+		MIT1002_01077	0.53	+1.1
1,184,260	-		MIT1002_01077	0.54	-0.2
1,184,272	-		MIT1002_01077	0.55	+1.6
1,184,342	-		MIT1002_01077	0.66	+1.0
1,184,349	+		MIT1002_01077	0.67	-0.4
1,184,351	+		MIT1002_01077	0.67	+0.7
1,184,359	-		MIT1002_01077	0.68	+0.2
1,184,359	-		MIT1002_01077	0.68	-0.7
1,184,394	+		MIT1002_01077	0.73	+0.3
1,184,394	+		MIT1002_01077	0.73	-1.4
1,184,394	+		MIT1002_01077	0.73	+0.2
1,184,402	-		MIT1002_01077	0.74	-1.1
1,184,613	+				-1.6
1,184,618	+				-0.3
1,184,693	-				-2.5
1,184,693	-				+0.2
1,184,693	-				-0.1
1,184,741	-		MIT1002_01078	0.11	-2.3
1,184,750	+		MIT1002_01078	0.12	-0.1
1,184,753	+		MIT1002_01078	0.12	+0.4
1,184,784	-		MIT1002_01078	0.15	-0.3
1,184,801	+		MIT1002_01078	0.16	-0.8
1,184,808	+		MIT1002_01078	0.17	-1.2
1,184,814	-		MIT1002_01078	0.17	+0.9
1,184,989	-		MIT1002_01078	0.32	-0.1
1,185,033	+		MIT1002_01078	0.36	-1.0
1,185,105	-		MIT1002_01078	0.42	-1.4
1,185,114	-		MIT1002_01078	0.42	-0.8
1,185,121	+		MIT1002_01078	0.43	+10.3
1,185,121	+		MIT1002_01078	0.43	+0.1
1,185,219	+		MIT1002_01078	0.51	+2.0
1,185,219	+		MIT1002_01078	0.51	+0.8
1,185,229	-		MIT1002_01078	0.52	-0.3
1,185,268	+		MIT1002_01078	0.55	-1.6
1,185,276	-		MIT1002_01078	0.56	-0.5
1,185,424	-		MIT1002_01078	0.68	-1.4
1,185,518	+		MIT1002_01078	0.76	+0.3
1,185,526	-		MIT1002_01078	0.77	+0.9
1,185,533	+		MIT1002_01078	0.77	-0.2
1,185,539	-		MIT1002_01078	0.78	-1.7
1,185,560	-		MIT1002_01078	0.80	+0.6
1,185,578	+		MIT1002_01078	0.81	-1.5
1,185,634	-		MIT1002_01078	0.86	-1.4
1,185,642	+		MIT1002_01078	0.87	-0.8
1,185,652	+		MIT1002_01078	0.87	+0.1
1,185,660	+		MIT1002_01078	0.88	+1.8
1,185,660	-		MIT1002_01078	0.88	-0.6
1,185,660	-		MIT1002_01078	0.88	+0.9
1,185,709	+				-1.7
1,185,803	-				+1.2
1,185,882	+				-0.8
1,185,893	+				+0.6
1,185,893	+				-1.6
1,185,901	-				+0.7
1,186,016	-		MIT1002_01079	0.20	+0.9
1,186,016	-		MIT1002_01079	0.20	+0.9
1,186,072	+		MIT1002_01079	0.25	-1.2
1,186,080	-		MIT1002_01079	0.26	+0.4
1,186,174	+		MIT1002_01079	0.35	-0.5
1,186,182	-		MIT1002_01079	0.36	+0.6
1,186,185	+		MIT1002_01079	0.36	-0.6
1,186,185	+		MIT1002_01079	0.36	-1.0
1,186,185	+		MIT1002_01079	0.36	-3.1
1,186,185	+		MIT1002_01079	0.36	-1.3
1,186,185	+		MIT1002_01079	0.36	-2.5
1,186,185	+		MIT1002_01079	0.36	-0.6
1,186,185	+		MIT1002_01079	0.36	-0.5
1,186,185	+		MIT1002_01079	0.36	-0.2
1,186,193	-		MIT1002_01079	0.37	-0.1
1,186,193	-		MIT1002_01079	0.37	-1.2
1,186,193	-		MIT1002_01079	0.37	-1.5
1,186,193	-		MIT1002_01079	0.37	-1.3
1,186,193	-		MIT1002_01079	0.37	+0.1
1,186,193	-		MIT1002_01079	0.37	-0.9
1,186,193	-		MIT1002_01079	0.37	-1.4
1,186,193	-		MIT1002_01079	0.37	-0.6
1,186,236	+		MIT1002_01079	0.41	-0.7
1,186,244	-		MIT1002_01079	0.42	-1.3
1,186,245	-		MIT1002_01079	0.42	+0.3
1,186,246	-		MIT1002_01079	0.42	-0.2
1,186,291	+		MIT1002_01079	0.46	-1.1
1,186,394	+		MIT1002_01079	0.56	+1.9
1,186,394	+		MIT1002_01079	0.56	-2.3
1,186,394	+		MIT1002_01079	0.56	-0.0
1,186,401	+		MIT1002_01079	0.56	-0.6
1,186,402	-		MIT1002_01079	0.56	-0.3
1,186,491	+		MIT1002_01079	0.65	-0.7
1,186,499	-		MIT1002_01079	0.65	-3.1
1,186,520	+		MIT1002_01079	0.67	-1.6
1,186,528	-		MIT1002_01079	0.68	+1.0
1,186,554	-		MIT1002_01079	0.70	-2.1
1,186,579	+		MIT1002_01079	0.73	-0.1
1,186,580	-		MIT1002_01079	0.73	+0.8
1,186,587	-		MIT1002_01079	0.74	-0.0
1,186,654	-		MIT1002_01079	0.80	-1.9
1,186,682	-		MIT1002_01079	0.82	-0.1
1,186,720	-		MIT1002_01079	0.86	+1.0
1,186,753	+		MIT1002_01079	0.89	-0.4