Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS17930

Experiment: biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM
3,938,893	+		LRK53_RS17925	0.56	+0.7
3,938,893	+		LRK53_RS17925	0.56	-0.3
3,938,893	+		LRK53_RS17925	0.56	+0.9
3,938,893	+		LRK53_RS17925	0.56	-0.4
3,938,893	+		LRK53_RS17925	0.56	-0.8
3,938,893	+		LRK53_RS17925	0.56	-0.8
3,938,893	+		LRK53_RS17925	0.56	-0.9
3,938,893	+		LRK53_RS17925	0.56	-2.4
3,938,893	+		LRK53_RS17925	0.56	+1.4
3,938,893	+		LRK53_RS17925	0.56	-1.5
3,938,893	+		LRK53_RS17925	0.56	-2.7
3,938,893	+		LRK53_RS17925	0.56	+0.4
3,938,893	+		LRK53_RS17925	0.56	-0.3
3,938,893	+		LRK53_RS17925	0.56	-0.3
3,938,893	+		LRK53_RS17925	0.56	-1.4
3,938,893	+		LRK53_RS17925	0.56	+1.6
3,938,893	+		LRK53_RS17925	0.56	-1.9
3,938,893	+		LRK53_RS17925	0.56	+0.1
3,938,893	+		LRK53_RS17925	0.56	-0.2
3,938,893	+		LRK53_RS17925	0.56	-0.7
3,938,893	+		LRK53_RS17925	0.56	-1.7
3,938,893	+		LRK53_RS17925	0.56	-0.3
3,938,893	+		LRK53_RS17925	0.56	-2.1
3,938,893	+		LRK53_RS17925	0.56	+2.1
3,938,893	+		LRK53_RS17925	0.56	-1.1
3,938,893	+		LRK53_RS17925	0.56	+1.3
3,938,893	+		LRK53_RS17925	0.56	-0.3
3,938,893	+		LRK53_RS17925	0.56	-0.1
3,938,893	+		LRK53_RS17925	0.56	-0.5
3,938,893	+		LRK53_RS17925	0.56	-2.0
3,938,893	+		LRK53_RS17925	0.56	+0.9
3,938,893	+		LRK53_RS17925	0.56	+0.3
3,938,893	+		LRK53_RS17925	0.56	+0.2
3,938,893	+		LRK53_RS17925	0.56	-0.4
3,938,893	+		LRK53_RS17925	0.56	-0.1
3,938,893	+		LRK53_RS17925	0.56	-1.2
3,938,893	+		LRK53_RS17925	0.56	-0.4
3,938,893	+		LRK53_RS17925	0.56	-1.1
3,938,893	+		LRK53_RS17925	0.56	-1.6
3,938,893	+		LRK53_RS17925	0.56	-1.7
3,938,893	+		LRK53_RS17925	0.56	+1.7
3,938,893	+		LRK53_RS17925	0.56	+0.1
3,938,893	+		LRK53_RS17925	0.56	+0.7
3,938,894	-		LRK53_RS17925	0.56	-0.3
3,938,894	-		LRK53_RS17925	0.56	-0.8
3,938,894	-		LRK53_RS17925	0.56	-1.0
3,938,894	-		LRK53_RS17925	0.56	-1.1
3,938,894	-		LRK53_RS17925	0.56	-0.3
3,938,894	-		LRK53_RS17925	0.56	+0.2
3,938,894	-		LRK53_RS17925	0.56	+1.2
3,938,894	-		LRK53_RS17925	0.56	-2.1
3,938,894	-		LRK53_RS17925	0.56	-1.1
3,938,894	-		LRK53_RS17925	0.56	-1.3
3,938,894	-		LRK53_RS17925	0.56	-1.3
3,938,894	-		LRK53_RS17925	0.56	+1.2
3,938,894	-		LRK53_RS17925	0.56	+1.9
3,938,894	-		LRK53_RS17925	0.56	-1.7
3,938,894	-		LRK53_RS17925	0.56	-1.9
3,938,894	-		LRK53_RS17925	0.56	-1.3
3,938,894	-		LRK53_RS17925	0.56	+0.2
3,938,894	-		LRK53_RS17925	0.56	+0.7
3,938,894	-		LRK53_RS17925	0.56	-0.7
3,938,894	-		LRK53_RS17925	0.56	-1.2
3,938,894	-		LRK53_RS17925	0.56	-1.0
3,938,894	-		LRK53_RS17925	0.56	-0.9
3,938,894	-		LRK53_RS17925	0.56	-0.0
3,938,894	-		LRK53_RS17925	0.56	-2.4
3,938,894	-		LRK53_RS17925	0.56	-2.7
3,938,894	-		LRK53_RS17925	0.56	+0.2
3,938,894	-		LRK53_RS17925	0.56	+1.3
3,938,894	-		LRK53_RS17925	0.56	-2.6
3,938,894	-		LRK53_RS17925	0.56	+0.1
3,938,894	-		LRK53_RS17925	0.56	+0.1
3,938,894	-		LRK53_RS17925	0.56	-1.2
3,938,894	-		LRK53_RS17925	0.56	-1.5
3,938,894	-		LRK53_RS17925	0.56	-0.5
3,938,894	-		LRK53_RS17925	0.56	-0.6
3,938,894	-		LRK53_RS17925	0.56	+1.2
3,938,899	+		LRK53_RS17925	0.57	-1.4
3,938,917	+		LRK53_RS17925	0.59	-0.6
3,938,917	+		LRK53_RS17925	0.59	+0.1
3,938,917	+		LRK53_RS17925	0.59	-2.2
3,938,917	+		LRK53_RS17925	0.59	-0.1
3,938,917	+		LRK53_RS17925	0.59	-1.1
3,938,917	+		LRK53_RS17925	0.59	-2.0
3,938,917	+		LRK53_RS17925	0.59	-1.8
3,938,918	-		LRK53_RS17925	0.59	-0.9
3,938,918	-		LRK53_RS17925	0.59	-0.9
3,939,076	+		LRK53_RS17925	0.80	-0.5
3,939,076	+		LRK53_RS17925	0.80	-1.1
3,939,122	+		LRK53_RS17925	0.86	-0.6
3,939,122	+		LRK53_RS17925	0.86	-0.2
3,939,122	+		LRK53_RS17925	0.86	-0.9
3,939,122	+		LRK53_RS17925	0.86	-0.1
3,939,122	+		LRK53_RS17925	0.86	+0.1
3,939,122	+		LRK53_RS17925	0.86	-2.3
3,939,123	-		LRK53_RS17925	0.86	+1.7
3,939,123	-		LRK53_RS17925	0.86	-0.4
3,939,123	-		LRK53_RS17925	0.86	-1.6
3,939,381	+		LRK53_RS17930	0.13	-2.4
3,939,381	+		LRK53_RS17930	0.13	-1.6
3,939,381	+		LRK53_RS17930	0.13	-1.5
3,939,381	+		LRK53_RS17930	0.13	+1.7
3,939,381	+		LRK53_RS17930	0.13	-0.8
3,939,382	-		LRK53_RS17930	0.13	-0.9
3,939,382	-		LRK53_RS17930	0.13	+1.0
3,939,417	+		LRK53_RS17930	0.16	-1.3
3,939,417	+		LRK53_RS17930	0.16	+0.5
3,939,417	+		LRK53_RS17930	0.16	-0.9
3,939,417	+		LRK53_RS17930	0.16	-1.6
3,939,418	-		LRK53_RS17930	0.16	-1.5
3,939,418	-		LRK53_RS17930	0.16	-0.4
3,939,474	+		LRK53_RS17930	0.20	-1.0
3,939,474	+		LRK53_RS17930	0.20	-3.0
3,939,588	+		LRK53_RS17930	0.30	-0.3
3,939,588	+		LRK53_RS17930	0.30	-0.4
3,939,589	-		LRK53_RS17930	0.30	-0.3
3,939,589	-		LRK53_RS17930	0.30	-0.4
3,939,711	+		LRK53_RS17930	0.40	-0.3
3,939,711	+		LRK53_RS17930	0.40	+1.5
3,939,711	+		LRK53_RS17930	0.40	-0.3
3,939,711	+		LRK53_RS17930	0.40	-0.9
3,939,711	+		LRK53_RS17930	0.40	+1.0
3,939,711	+		LRK53_RS17930	0.40	-0.3
3,939,711	+		LRK53_RS17930	0.40	+1.2
3,939,711	+		LRK53_RS17930	0.40	+0.5
3,939,711	+		LRK53_RS17930	0.40	+0.5
3,939,711	+		LRK53_RS17930	0.40	-0.4
3,939,711	+		LRK53_RS17930	0.40	-0.1
3,939,711	+		LRK53_RS17930	0.40	-2.5
3,939,711	+		LRK53_RS17930	0.40	-0.2
3,939,712	-		LRK53_RS17930	0.41	+0.2
3,939,712	-		LRK53_RS17930	0.41	-2.2
3,939,712	-		LRK53_RS17930	0.41	-1.0
3,939,712	-		LRK53_RS17930	0.41	+1.8
3,939,712	-		LRK53_RS17930	0.41	+2.6
3,939,712	-		LRK53_RS17930	0.41	-0.5
3,939,712	-		LRK53_RS17930	0.41	-3.7
3,939,712	-		LRK53_RS17930	0.41	-0.3
3,939,712	-		LRK53_RS17930	0.41	-0.9
3,939,712	-		LRK53_RS17930	0.41	-0.3
3,939,712	-		LRK53_RS17930	0.41	-2.8
3,939,712	-		LRK53_RS17930	0.41	-1.3
3,939,712	-		LRK53_RS17930	0.41	-1.3
3,939,712	-		LRK53_RS17930	0.41	-0.2
3,939,712	-		LRK53_RS17930	0.41	-0.1
3,939,747	+		LRK53_RS17930	0.43	-0.5
3,939,748	-		LRK53_RS17930	0.44	-0.4
3,939,748	-		LRK53_RS17930	0.44	-0.0
3,939,748	-		LRK53_RS17930	0.44	+0.2
3,939,748	-		LRK53_RS17930	0.44	-0.3
3,939,846	+		LRK53_RS17930	0.52	-1.4
3,939,846	+		LRK53_RS17930	0.52	-1.4
3,939,847	-		LRK53_RS17930	0.52	-1.3
3,939,966	+		LRK53_RS17930	0.62	-0.6
3,939,967	-		LRK53_RS17930	0.62	+1.6
3,940,315	-				+0.5
3,940,315	-				-1.4
3,940,315	-				-1.8
3,940,362	+				-0.0
3,940,362	+				+0.2
3,940,484	+				-0.1
3,940,484	+				+1.5
3,940,484	+				+1.5
3,940,484	+				-0.6
3,940,485	-				-2.8
3,940,485	-				-1.6
3,940,485	-				-1.7
3,940,485	-				-0.1
3,940,485	-				+0.7
3,940,485	-				-1.1
3,940,730	+		LRK53_RS17935	0.41	-0.9
3,940,778	+		LRK53_RS17935	0.47	-0.1
3,940,778	+		LRK53_RS17935	0.47	+0.1
3,940,778	+		LRK53_RS17935	0.47	-1.5
3,940,778	+		LRK53_RS17935	0.47	+1.1
3,940,778	+		LRK53_RS17935	0.47	-0.9
3,940,778	+		LRK53_RS17935	0.47	+0.1
3,940,778	+		LRK53_RS17935	0.47	-1.5
3,940,779	-		LRK53_RS17935	0.47	-0.3
3,940,779	-		LRK53_RS17935	0.47	-0.3
3,940,779	-		LRK53_RS17935	0.47	-1.3
3,940,779	-		LRK53_RS17935	0.47	-0.9
3,940,779	-		LRK53_RS17935	0.47	-1.3
3,940,779	-		LRK53_RS17935	0.47	-1.4
3,940,779	-		LRK53_RS17935	0.47	-1.5
3,940,779	-		LRK53_RS17935	0.47	-0.7
3,940,779	-		LRK53_RS17935	0.47	+0.1
3,940,779	-		LRK53_RS17935	0.47	-0.5
3,940,779	-		LRK53_RS17935	0.47	-0.4
3,940,808	+		LRK53_RS17935	0.51	+1.1
3,940,808	+		LRK53_RS17935	0.51	-0.3
3,940,808	+		LRK53_RS17935	0.51	-1.8
3,940,808	+		LRK53_RS17935	0.51	-0.9
3,940,808	+		LRK53_RS17935	0.51	+0.7
3,940,808	+		LRK53_RS17935	0.51	-0.9
3,940,808	+		LRK53_RS17935	0.51	-0.9
3,940,809	-		LRK53_RS17935	0.51	+1.0
3,940,809	-		LRK53_RS17935	0.51	-1.6
3,940,809	-		LRK53_RS17935	0.51	-1.2
3,940,809	-		LRK53_RS17935	0.51	-0.1
3,940,809	-		LRK53_RS17935	0.51	+1.5
3,940,809	-		LRK53_RS17935	0.51	-1.2
3,940,809	-		LRK53_RS17935	0.51	+0.2
3,940,809	-		LRK53_RS17935	0.51	-1.1
3,940,809	-		LRK53_RS17935	0.51	-1.7
3,940,809	-		LRK53_RS17935	0.51	-2.0
3,940,809	-		LRK53_RS17935	0.51	-1.5
3,941,120	+				-0.5
3,941,120	+				-0.3
3,941,120	+				+1.4
3,941,120	+				-0.3
3,941,120	+				-0.5
3,941,120	+				+0.3
3,941,120	+				-0.8
3,941,120	+				+0.5
3,941,120	+				-1.4
3,941,120	+				-0.2
3,941,121	-				-2.4
3,941,121	-				+0.9
3,941,121	-				+0.2
3,941,121	-				+1.6
3,941,121	-				+0.1
3,941,121	-				-1.4
3,941,121	-				-1.5
3,941,121	-				+1.1
3,941,121	-				+0.6
3,941,121	-				+0.7
3,941,121	-				-1.1
3,941,228	+				+2.1
3,941,229	-				-1.3
3,941,229	-				-0.6
3,941,229	-				-0.8
3,941,253	-				-0.8
3,941,253	-				+0.1
3,941,253	-				-0.6
3,941,265	+				-2.2
3,941,278	+				+1.3
3,941,279	-				+0.7
3,941,279	-				-1.5
3,941,374	+				-0.4
3,941,374	+				+1.6
3,941,374	+				+1.3
3,941,374	+				-0.6
3,941,374	+				-0.9
3,941,374	+				-1.8
3,941,374	+				+0.2
3,941,375	-				-1.4
3,941,375	-				-0.8
3,941,375	-				-0.5
3,941,375	-				+0.6
3,941,375	-				-0.2
3,941,375	-				-0.8
3,941,375	-				+0.4
3,941,375	-				-3.4
3,941,377	+				-1.7
3,941,377	+				-3.0
3,941,377	+				-2.0
3,941,377	+				-1.1
3,941,377	+				+0.8
3,941,378	-				-1.3
3,941,378	-				-0.5
3,941,378	-				-1.1
3,941,378	-				-1.3
3,941,378	-				-0.8
3,941,378	-				-1.6
3,941,378	-				+0.1