Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS17115

Experiment: biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM
3,764,938	-		LRK53_RS17110	0.69	-0.4
3,764,938	-		LRK53_RS17110	0.69	-2.9
3,764,938	-		LRK53_RS17110	0.69	-0.4
3,765,015	+		LRK53_RS17110	0.73	-0.8
3,765,015	+		LRK53_RS17110	0.73	-0.1
3,765,015	+		LRK53_RS17110	0.73	+0.0
3,765,015	+		LRK53_RS17110	0.73	+1.4
3,765,016	-		LRK53_RS17110	0.73	+1.9
3,765,016	-		LRK53_RS17110	0.73	+0.7
3,765,016	-		LRK53_RS17110	0.73	+0.4
3,765,016	-		LRK53_RS17110	0.73	-0.7
3,765,016	-		LRK53_RS17110	0.73	+0.0
3,765,016	-		LRK53_RS17110	0.73	-0.3
3,765,111	+		LRK53_RS17110	0.78	-0.6
3,765,111	+		LRK53_RS17110	0.78	+2.4
3,765,111	+		LRK53_RS17110	0.78	-1.0
3,765,111	+		LRK53_RS17110	0.78	-1.3
3,765,111	+		LRK53_RS17110	0.78	-1.5
3,765,111	+		LRK53_RS17110	0.78	-0.3
3,765,111	+		LRK53_RS17110	0.78	-0.5
3,765,111	+		LRK53_RS17110	0.78	-0.1
3,765,111	+		LRK53_RS17110	0.78	-0.7
3,765,111	+		LRK53_RS17110	0.78	-0.3
3,765,111	+		LRK53_RS17110	0.78	+4.0
3,765,111	+		LRK53_RS17110	0.78	+0.6
3,765,111	+		LRK53_RS17110	0.78	-0.5
3,765,111	+		LRK53_RS17110	0.78	-0.1
3,765,111	+		LRK53_RS17110	0.78	-1.1
3,765,111	+		LRK53_RS17110	0.78	+1.6
3,765,111	+		LRK53_RS17110	0.78	-1.6
3,765,111	+		LRK53_RS17110	0.78	-0.3
3,765,111	+		LRK53_RS17110	0.78	-1.1
3,765,111	+		LRK53_RS17110	0.78	+1.8
3,765,111	+		LRK53_RS17110	0.78	+1.0
3,765,111	+		LRK53_RS17110	0.78	+1.6
3,765,111	+		LRK53_RS17110	0.78	-0.9
3,765,111	+		LRK53_RS17110	0.78	-1.1
3,765,111	+		LRK53_RS17110	0.78	-0.0
3,765,111	+		LRK53_RS17110	0.78	-1.0
3,765,111	+		LRK53_RS17110	0.78	-0.6
3,765,111	+		LRK53_RS17110	0.78	-0.8
3,765,111	+		LRK53_RS17110	0.78	-0.4
3,765,111	+		LRK53_RS17110	0.78	-2.0
3,765,111	+		LRK53_RS17110	0.78	+0.2
3,765,111	+		LRK53_RS17110	0.78	-1.3
3,765,111	+		LRK53_RS17110	0.78	-0.3
3,765,111	+		LRK53_RS17110	0.78	+1.2
3,765,111	+		LRK53_RS17110	0.78	+0.4
3,765,111	+		LRK53_RS17110	0.78	+0.5
3,765,111	+		LRK53_RS17110	0.78	-0.4
3,765,111	+		LRK53_RS17110	0.78	-1.9
3,765,111	+		LRK53_RS17110	0.78	+0.3
3,765,112	-		LRK53_RS17110	0.78	+0.2
3,765,112	-		LRK53_RS17110	0.78	+1.5
3,765,112	-		LRK53_RS17110	0.78	-0.5
3,765,112	-		LRK53_RS17110	0.78	-1.6
3,765,112	-		LRK53_RS17110	0.78	-1.2
3,765,112	-		LRK53_RS17110	0.78	+1.0
3,765,112	-		LRK53_RS17110	0.78	-0.6
3,765,112	-		LRK53_RS17110	0.78	+0.4
3,765,112	-		LRK53_RS17110	0.78	+1.0
3,765,112	-		LRK53_RS17110	0.78	-1.3
3,765,112	-		LRK53_RS17110	0.78	-1.6
3,765,112	-		LRK53_RS17110	0.78	-0.3
3,765,112	-		LRK53_RS17110	0.78	+0.7
3,765,112	-		LRK53_RS17110	0.78	-1.3
3,765,112	-		LRK53_RS17110	0.78	-0.1
3,765,112	-		LRK53_RS17110	0.78	+0.7
3,765,112	-		LRK53_RS17110	0.78	+0.2
3,765,112	-		LRK53_RS17110	0.78	+1.4
3,765,112	-		LRK53_RS17110	0.78	-0.4
3,765,112	-		LRK53_RS17110	0.78	-0.1
3,765,112	-		LRK53_RS17110	0.78	-0.4
3,765,112	-		LRK53_RS17110	0.78	+0.2
3,765,112	-		LRK53_RS17110	0.78	+1.2
3,765,112	-		LRK53_RS17110	0.78	+1.3
3,765,112	-		LRK53_RS17110	0.78	+2.4
3,765,112	-		LRK53_RS17110	0.78	-0.7
3,765,112	-		LRK53_RS17110	0.78	-1.3
3,765,112	-		LRK53_RS17110	0.78	+0.9
3,765,112	-		LRK53_RS17110	0.78	+0.1
3,765,112	-		LRK53_RS17110	0.78	+0.2
3,765,112	-		LRK53_RS17110	0.78	-0.9
3,765,112	-		LRK53_RS17110	0.78	-1.2
3,765,112	-		LRK53_RS17110	0.78	+0.9
3,765,112	-		LRK53_RS17110	0.78	+0.6
3,765,112	-		LRK53_RS17110	0.78	-0.4
3,765,112	-		LRK53_RS17110	0.78	+0.2
3,765,112	-		LRK53_RS17110	0.78	+1.2
3,765,112	-		LRK53_RS17110	0.78	+5.2
3,765,112	-		LRK53_RS17110	0.78	-0.4
3,765,112	-		LRK53_RS17110	0.78	-1.1
3,765,112	-		LRK53_RS17110	0.78	-0.6
3,765,112	-		LRK53_RS17110	0.78	-0.4
3,765,112	-		LRK53_RS17110	0.78	+0.7
3,765,112	-		LRK53_RS17110	0.78	+1.9
3,765,112	-		LRK53_RS17110	0.78	-1.9
3,765,112	-		LRK53_RS17110	0.78	-0.8
3,765,112	-		LRK53_RS17110	0.78	-0.3
3,765,112	-		LRK53_RS17110	0.78	-0.0
3,765,112	-		LRK53_RS17110	0.78	-0.7
3,765,112	-		LRK53_RS17110	0.78	+0.7
3,765,112	-		LRK53_RS17110	0.78	-1.2
3,765,112	-		LRK53_RS17110	0.78	+3.0
3,765,112	-		LRK53_RS17110	0.78	+0.2
3,765,112	-		LRK53_RS17110	0.78	-0.7
3,765,345	+		LRK53_RS17110	0.89	+1.3
3,765,345	+		LRK53_RS17110	0.89	-1.8
3,765,345	+		LRK53_RS17110	0.89	-1.1
3,765,346	-		LRK53_RS17110	0.89	-0.5
3,765,346	-		LRK53_RS17110	0.89	-2.7
3,765,346	-		LRK53_RS17110	0.89	-1.0
3,765,346	-		LRK53_RS17110	0.89	-0.3
3,765,346	-		LRK53_RS17110	0.89	+0.6
3,765,346	-		LRK53_RS17110	0.89	+2.2
3,765,635	+				-0.8
3,765,635	+				-1.3
3,765,635	+				-0.6
3,765,635	+				+0.0
3,765,636	-				-0.9
3,765,646	+				+0.7
3,765,647	-				+0.9
3,765,659	+				+0.5
3,765,659	+				-1.1
3,765,659	+				+1.0
3,765,659	+				+0.8
3,765,659	+				-0.4
3,765,659	+				+0.8
3,765,660	-				-1.8
3,765,660	-				+0.2
3,765,660	-				-1.1
3,765,660	-				-2.1
3,765,660	-				+0.0
3,765,660	-				-0.3
3,765,660	-				-1.1
3,765,690	+				-0.8
3,765,690	+				-0.8
3,765,690	+				+0.2
3,765,691	-				-0.5
3,765,691	-				-1.0
3,765,691	-				-1.2
3,765,776	+				-0.1
3,765,776	+				-1.1
3,765,776	+				-1.2
3,765,776	+				-0.6
3,765,776	+				-0.7
3,765,776	+				-1.1
3,765,776	+				-1.2
3,765,777	-				-0.1
3,765,777	-				-0.7
3,765,777	-				-0.8
3,765,777	-				+0.6
3,765,777	-				-1.0
3,765,981	+		LRK53_RS17115	0.32	+0.4
3,765,981	+		LRK53_RS17115	0.32	-0.6
3,765,981	+		LRK53_RS17115	0.32	-2.2
3,765,981	+		LRK53_RS17115	0.32	-2.0
3,765,982	-		LRK53_RS17115	0.32	+1.7
3,765,982	-		LRK53_RS17115	0.32	-1.7
3,766,048	-		LRK53_RS17115	0.42	-1.4
3,766,179	+		LRK53_RS17115	0.63	-1.1
3,766,179	+		LRK53_RS17115	0.63	-1.3
3,766,179	+		LRK53_RS17115	0.63	-1.1
3,766,179	+		LRK53_RS17115	0.63	-2.2
3,766,179	+		LRK53_RS17115	0.63	-1.7
3,766,179	+		LRK53_RS17115	0.63	-2.5
3,766,179	+		LRK53_RS17115	0.63	-1.6
3,766,179	+		LRK53_RS17115	0.63	-1.4
3,766,179	+		LRK53_RS17115	0.63	-1.5
3,766,179	+		LRK53_RS17115	0.63	-1.2
3,766,179	+		LRK53_RS17115	0.63	-1.5
3,766,179	+		LRK53_RS17115	0.63	-1.3
3,766,179	+		LRK53_RS17115	0.63	-0.7
3,766,179	+		LRK53_RS17115	0.63	-1.0
3,766,179	+		LRK53_RS17115	0.63	-0.3
3,766,180	-		LRK53_RS17115	0.63	-2.3
3,766,180	-		LRK53_RS17115	0.63	+0.8
3,766,180	-		LRK53_RS17115	0.63	-0.9
3,766,180	-		LRK53_RS17115	0.63	-0.6
3,766,180	-		LRK53_RS17115	0.63	+1.7
3,766,180	-		LRK53_RS17115	0.63	-0.8
3,766,180	-		LRK53_RS17115	0.63	+0.4
3,766,180	-		LRK53_RS17115	0.63	-0.2
3,766,180	-		LRK53_RS17115	0.63	-0.1
3,766,180	-		LRK53_RS17115	0.63	+0.3
3,766,180	-		LRK53_RS17115	0.63	-1.3
3,766,180	-		LRK53_RS17115	0.63	-1.4
3,766,180	-		LRK53_RS17115	0.63	-0.1
3,766,180	-		LRK53_RS17115	0.63	-1.3
3,766,180	-		LRK53_RS17115	0.63	+0.0
3,766,203	+		LRK53_RS17115	0.67	+1.0
3,766,204	-		LRK53_RS17115	0.67	-0.5
3,766,272	+		LRK53_RS17115	0.78	-1.3
3,766,272	+		LRK53_RS17115	0.78	-1.0
3,766,272	+		LRK53_RS17115	0.78	-0.1
3,766,272	+		LRK53_RS17115	0.78	-1.4
3,766,273	-		LRK53_RS17115	0.78	-0.5
3,766,273	-		LRK53_RS17115	0.78	-1.0
3,766,294	-		LRK53_RS17115	0.81	-2.2
3,766,329	+		LRK53_RS17115	0.87	-1.3
3,766,329	+		LRK53_RS17115	0.87	-2.5
3,766,329	+		LRK53_RS17115	0.87	-0.8
3,766,329	+		LRK53_RS17115	0.87	-1.8
3,766,329	+		LRK53_RS17115	0.87	+0.9
3,766,329	+		LRK53_RS17115	0.87	-1.7
3,766,329	+		LRK53_RS17115	0.87	-1.6
3,766,329	+		LRK53_RS17115	0.87	-1.4
3,766,329	+		LRK53_RS17115	0.87	-1.9
3,766,330	-		LRK53_RS17115	0.87	+0.6
3,766,330	-		LRK53_RS17115	0.87	-0.3
3,766,330	-		LRK53_RS17115	0.87	-0.5
3,766,330	-		LRK53_RS17115	0.87	-0.6
3,766,335	+		LRK53_RS17115	0.88	+0.1
3,766,335	+		LRK53_RS17115	0.88	-0.5
3,766,335	+		LRK53_RS17115	0.88	+0.3
3,766,335	+		LRK53_RS17115	0.88	+2.1
3,766,335	+		LRK53_RS17115	0.88	-0.6
3,766,335	+		LRK53_RS17115	0.88	-2.8
3,766,335	+		LRK53_RS17115	0.88	-0.5
3,766,335	+		LRK53_RS17115	0.88	-0.8
3,766,335	+		LRK53_RS17115	0.88	-1.4
3,766,335	+		LRK53_RS17115	0.88	-0.9
3,766,336	-		LRK53_RS17115	0.88	-0.1
3,766,336	-		LRK53_RS17115	0.88	+1.3
3,766,336	-		LRK53_RS17115	0.88	-1.0
3,766,336	-		LRK53_RS17115	0.88	-0.6
3,766,336	-		LRK53_RS17115	0.88	+1.8
3,766,336	-		LRK53_RS17115	0.88	+0.4
3,766,336	-		LRK53_RS17115	0.88	-2.1
3,766,336	-		LRK53_RS17115	0.88	+0.4
3,766,338	+		LRK53_RS17115	0.89	-1.5
3,766,338	+		LRK53_RS17115	0.89	-1.6
3,766,339	-		LRK53_RS17115	0.89	-0.6
3,766,398	+				-1.3
3,766,398	+				-0.9
3,766,399	-				+0.6
3,766,399	-				+0.0
3,766,446	+				+1.4
3,766,481	+				-1.7
3,766,482	-				+0.3
3,766,482	-				-1.4
3,766,482	-				-0.4
3,766,482	-				+0.5
3,766,730	+		LRK53_RS17120	0.25	+0.2
3,766,752	-		LRK53_RS17120	0.29	+0.0
3,766,817	+		LRK53_RS17120	0.40	+0.3
3,766,817	+		LRK53_RS17120	0.40	-0.8
3,766,817	+		LRK53_RS17120	0.40	-1.1
3,766,817	+		LRK53_RS17120	0.40	-1.1
3,766,817	+		LRK53_RS17120	0.40	-2.3
3,766,817	+		LRK53_RS17120	0.40	-1.1
3,766,817	+		LRK53_RS17120	0.40	-1.1
3,766,817	+		LRK53_RS17120	0.40	-0.3
3,766,818	-		LRK53_RS17120	0.40	-2.6
3,766,818	-		LRK53_RS17120	0.40	-0.3
3,766,946	+		LRK53_RS17120	0.61	-0.2
3,766,946	+		LRK53_RS17120	0.61	-1.1
3,766,946	+		LRK53_RS17120	0.61	-1.4
3,766,946	+		LRK53_RS17120	0.61	-1.7
3,766,946	+		LRK53_RS17120	0.61	-0.1
3,766,946	+		LRK53_RS17120	0.61	+0.2
3,766,946	+		LRK53_RS17120	0.61	+0.4
3,766,946	+		LRK53_RS17120	0.61	-3.1
3,766,947	-		LRK53_RS17120	0.61	+0.1
3,766,947	-		LRK53_RS17120	0.61	-1.9
3,766,947	-		LRK53_RS17120	0.61	+0.5
3,766,947	-		LRK53_RS17120	0.61	+0.2
3,766,947	-		LRK53_RS17120	0.61	+0.9
3,766,947	-		LRK53_RS17120	0.61	-0.5
3,766,947	-		LRK53_RS17120	0.61	-1.8
3,766,947	-		LRK53_RS17120	0.61	-0.6
3,766,960	+		LRK53_RS17120	0.63	-1.0
3,766,970	+		LRK53_RS17120	0.65	-0.8
3,766,970	+		LRK53_RS17120	0.65	+0.3
3,766,970	+		LRK53_RS17120	0.65	-0.1
3,766,970	+		LRK53_RS17120	0.65	+1.5
3,766,970	+		LRK53_RS17120	0.65	-1.3
3,766,970	+		LRK53_RS17120	0.65	-1.3
3,766,970	+		LRK53_RS17120	0.65	-1.0
3,766,970	+		LRK53_RS17120	0.65	-0.1
3,766,970	+		LRK53_RS17120	0.65	+0.2
3,766,970	+		LRK53_RS17120	0.65	-0.3
3,766,970	+		LRK53_RS17120	0.65	+0.6
3,766,970	+		LRK53_RS17120	0.65	+1.2
3,766,971	-		LRK53_RS17120	0.65	-2.2
3,766,971	-		LRK53_RS17120	0.65	-0.4
3,766,971	-		LRK53_RS17120	0.65	+0.7
3,766,971	-		LRK53_RS17120	0.65	-1.1
3,766,971	-		LRK53_RS17120	0.65	+0.8
3,766,971	-		LRK53_RS17120	0.65	+0.6
3,766,971	-		LRK53_RS17120	0.65	+1.9
3,766,971	-		LRK53_RS17120	0.65	-1.6
3,766,971	-		LRK53_RS17120	0.65	-0.4
3,766,971	-		LRK53_RS17120	0.65	+0.9
3,766,971	-		LRK53_RS17120	0.65	-0.2
3,767,042	+		LRK53_RS17120	0.77	-1.7
3,767,043	-		LRK53_RS17120	0.77	-1.5
3,767,063	+		LRK53_RS17120	0.81	-1.8
3,767,099	+		LRK53_RS17120	0.86	+0.9
3,767,099	+		LRK53_RS17120	0.86	-0.7
3,767,099	+		LRK53_RS17120	0.86	-2.5
3,767,099	+		LRK53_RS17120	0.86	+0.6
3,767,099	+		LRK53_RS17120	0.86	-0.1
3,767,099	+		LRK53_RS17120	0.86	+0.4
3,767,099	+		LRK53_RS17120	0.86	-0.7
3,767,099	+		LRK53_RS17120	0.86	-1.8
3,767,099	+		LRK53_RS17120	0.86	+0.1
3,767,099	+		LRK53_RS17120	0.86	-0.4
3,767,099	+		LRK53_RS17120	0.86	-2.1
3,767,100	-		LRK53_RS17120	0.87	-0.3
3,767,100	-		LRK53_RS17120	0.87	-0.7
3,767,100	-		LRK53_RS17120	0.87	-0.8
3,767,100	-		LRK53_RS17120	0.87	-0.8
3,767,100	-		LRK53_RS17120	0.87	+0.7
3,767,100	-		LRK53_RS17120	0.87	+0.0
3,767,100	-		LRK53_RS17120	0.87	+1.0
3,767,100	-		LRK53_RS17120	0.87	-0.4
3,767,100	-		LRK53_RS17120	0.87	+0.2
3,767,100	-		LRK53_RS17120	0.87	+0.8
3,767,100	-		LRK53_RS17120	0.87	-0.2
3,767,100	-		LRK53_RS17120	0.87	-0.8
3,767,100	-		LRK53_RS17120	0.87	-0.9
3,767,100	-		LRK53_RS17120	0.87	-0.4
3,767,105	+		LRK53_RS17120	0.88	+0.3
3,767,105	+		LRK53_RS17120	0.88	-0.5
3,767,105	+		LRK53_RS17120	0.88	-1.6
3,767,105	+		LRK53_RS17120	0.88	-0.1
3,767,105	+		LRK53_RS17120	0.88	-1.2
3,767,105	+		LRK53_RS17120	0.88	-0.2
3,767,105	+		LRK53_RS17120	0.88	-1.1
3,767,105	+		LRK53_RS17120	0.88	-1.4
3,767,106	-		LRK53_RS17120	0.88	-0.1
3,767,106	-		LRK53_RS17120	0.88	-1.3
3,767,106	-		LRK53_RS17120	0.88	-1.2
3,767,106	-		LRK53_RS17120	0.88	+0.3
3,767,106	-		LRK53_RS17120	0.88	+1.3
3,767,106	-		LRK53_RS17120	0.88	-1.1
3,767,106	-		LRK53_RS17120	0.88	-0.7
3,767,106	-		LRK53_RS17120	0.88	+0.4
3,767,106	-		LRK53_RS17120	0.88	+0.7
3,767,106	-		LRK53_RS17120	0.88	-0.9
3,767,106	-		LRK53_RS17120	0.88	-2.0
3,767,106	-		LRK53_RS17120	0.88	-0.9
3,767,108	+		LRK53_RS17120	0.88	+0.4
3,767,108	+		LRK53_RS17120	0.88	-3.3
3,767,108	+		LRK53_RS17120	0.88	-0.3
3,767,108	+		LRK53_RS17120	0.88	-0.0
3,767,108	+		LRK53_RS17120	0.88	-1.9
3,767,108	+		LRK53_RS17120	0.88	+0.9
3,767,108	+		LRK53_RS17120	0.88	-0.3
3,767,108	+		LRK53_RS17120	0.88	-2.4
3,767,109	-		LRK53_RS17120	0.88	-1.1
3,767,109	-		LRK53_RS17120	0.88	-0.7
3,767,109	-		LRK53_RS17120	0.88	-0.6
3,767,109	-		LRK53_RS17120	0.88	-0.6
3,767,109	-		LRK53_RS17120	0.88	-1.2
3,767,109	-		LRK53_RS17120	0.88	+0.1
3,767,109	-		LRK53_RS17120	0.88	-1.7
3,767,109	-		LRK53_RS17120	0.88	-1.2
3,767,109	-		LRK53_RS17120	0.88	-0.8
3,767,169	-				-1.4
3,767,169	-				-1.8
3,767,234	+				+1.0
3,767,234	+				+1.6
3,767,234	+				-0.0
3,767,234	+				-0.7
3,767,234	+				-1.0
3,767,234	+				-0.9
3,767,234	+				-1.9
3,767,234	+				-0.9
3,767,234	+				-1.3
3,767,234	+				-0.4
3,767,234	+				-3.3
3,767,234	+				-0.2
3,767,234	+				-3.1
3,767,234	+				-0.6
3,767,235	-				-3.2
3,767,235	-				-1.7
3,767,235	-				-1.0
3,767,235	-				+0.9
3,767,235	-				-0.6
3,767,235	-				-1.3
3,767,235	-				-4.3
3,767,235	-				-1.3
3,767,235	-				-0.5
3,767,235	-				-2.3
3,767,235	-				-1.7
3,767,339	+				+0.4
3,767,339	+				-1.2
3,767,340	-				-0.8
3,767,340	-				-0.8
3,767,357	-				-0.5