Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS17020

Experiment: biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM
3,735,346	+		LRK53_RS17015	0.37	-2.4
3,735,346	+		LRK53_RS17015	0.37	-1.3
3,735,346	+		LRK53_RS17015	0.37	-1.3
3,735,346	+		LRK53_RS17015	0.37	-1.9
3,735,346	+		LRK53_RS17015	0.37	-0.7
3,735,346	+		LRK53_RS17015	0.37	-0.3
3,735,347	-		LRK53_RS17015	0.37	-1.4
3,735,433	+		LRK53_RS17015	0.45	+0.6
3,735,433	+		LRK53_RS17015	0.45	-2.2
3,735,433	+		LRK53_RS17015	0.45	-1.5
3,735,433	+		LRK53_RS17015	0.45	-0.3
3,735,434	-		LRK53_RS17015	0.45	+0.0
3,735,434	-		LRK53_RS17015	0.45	+2.3
3,735,434	-		LRK53_RS17015	0.45	+1.6
3,735,434	-		LRK53_RS17015	0.45	+0.8
3,735,434	-		LRK53_RS17015	0.45	+0.0
3,735,505	+		LRK53_RS17015	0.51	-0.7
3,735,505	+		LRK53_RS17015	0.51	-1.0
3,735,505	+		LRK53_RS17015	0.51	+1.8
3,735,505	+		LRK53_RS17015	0.51	-0.3
3,735,505	+		LRK53_RS17015	0.51	-3.5
3,735,505	+		LRK53_RS17015	0.51	-0.6
3,735,505	+		LRK53_RS17015	0.51	-0.2
3,735,505	+		LRK53_RS17015	0.51	-2.1
3,735,506	-		LRK53_RS17015	0.52	+0.1
3,735,506	-		LRK53_RS17015	0.52	-1.1
3,735,506	-		LRK53_RS17015	0.52	-0.2
3,735,506	-		LRK53_RS17015	0.52	-0.7
3,735,619	+		LRK53_RS17015	0.62	-1.4
3,735,619	+		LRK53_RS17015	0.62	-1.0
3,735,620	-		LRK53_RS17015	0.62	-1.2
3,735,620	-		LRK53_RS17015	0.62	+1.3
3,735,620	-		LRK53_RS17015	0.62	-2.3
3,735,679	+		LRK53_RS17015	0.67	-0.4
3,735,679	+		LRK53_RS17015	0.67	-0.2
3,735,679	+		LRK53_RS17015	0.67	-0.4
3,735,680	-		LRK53_RS17015	0.67	+2.0
3,735,680	-		LRK53_RS17015	0.67	-0.4
3,735,680	-		LRK53_RS17015	0.67	+0.0
3,735,680	-		LRK53_RS17015	0.67	-1.0
3,735,680	-		LRK53_RS17015	0.67	-0.3
3,735,715	+		LRK53_RS17015	0.71	-1.7
3,735,715	+		LRK53_RS17015	0.71	-2.3
3,735,715	+		LRK53_RS17015	0.71	-1.1
3,735,715	+		LRK53_RS17015	0.71	-0.2
3,735,716	-		LRK53_RS17015	0.71	-0.7
3,735,832	+		LRK53_RS17015	0.81	+0.7
3,735,832	+		LRK53_RS17015	0.81	-1.9
3,735,832	+		LRK53_RS17015	0.81	+0.7
3,735,832	+		LRK53_RS17015	0.81	+0.2
3,735,832	+		LRK53_RS17015	0.81	-0.7
3,735,832	+		LRK53_RS17015	0.81	-0.5
3,735,832	+		LRK53_RS17015	0.81	+1.4
3,735,832	+		LRK53_RS17015	0.81	-2.1
3,735,832	+		LRK53_RS17015	0.81	+1.0
3,735,832	+		LRK53_RS17015	0.81	-1.4
3,735,832	+		LRK53_RS17015	0.81	+0.2
3,735,832	+		LRK53_RS17015	0.81	-1.1
3,735,832	+		LRK53_RS17015	0.81	-1.6
3,735,832	+		LRK53_RS17015	0.81	+0.7
3,735,832	+		LRK53_RS17015	0.81	-1.2
3,735,832	+		LRK53_RS17015	0.81	-0.2
3,735,833	-		LRK53_RS17015	0.81	+1.4
3,735,833	-		LRK53_RS17015	0.81	-0.6
3,735,833	-		LRK53_RS17015	0.81	-0.5
3,735,833	-		LRK53_RS17015	0.81	-0.2
3,736,098	+				-0.8
3,736,098	+				-1.4
3,736,098	+				-1.5
3,736,098	+				-0.7
3,736,098	+				-0.1
3,736,098	+				-0.3
3,736,098	+				-0.0
3,736,099	-				-2.3
3,736,099	-				-0.3
3,736,250	+				+0.3
3,736,250	+				-0.3
3,736,250	+				-1.1
3,736,250	+				+0.1
3,736,250	+				-0.2
3,736,250	+				-1.1
3,736,250	+				-2.6
3,736,250	+				-0.4
3,736,250	+				+2.0
3,736,250	+				-1.2
3,736,250	+				-0.8
3,736,250	+				+1.3
3,736,250	+				-0.9
3,736,250	+				-1.6
3,736,250	+				-1.1
3,736,250	+				-0.8
3,736,250	+				-0.8
3,736,251	-				-0.9
3,736,251	-				-0.9
3,736,251	-				-1.2
3,736,251	-				+0.3
3,736,251	-				-1.2
3,736,251	-				-0.4
3,736,251	-				-0.2
3,736,251	-				-2.5
3,736,251	-				-2.0
3,736,251	-				-0.2
3,736,343	+				-2.4
3,736,343	+				-0.3
3,736,344	-				+1.2
3,736,344	-				+0.6
3,736,373	+		LRK53_RS17020	0.12	-0.4
3,736,373	+		LRK53_RS17020	0.12	-1.7
3,736,373	+		LRK53_RS17020	0.12	-1.4
3,736,374	-		LRK53_RS17020	0.12	+1.7
3,736,374	-		LRK53_RS17020	0.12	+0.5
3,736,424	+		LRK53_RS17020	0.15	+0.2
3,736,424	+		LRK53_RS17020	0.15	-2.1
3,736,424	+		LRK53_RS17020	0.15	-0.9
3,736,424	+		LRK53_RS17020	0.15	-2.2
3,736,424	+		LRK53_RS17020	0.15	-0.4
3,736,424	+		LRK53_RS17020	0.15	+1.4
3,736,424	+		LRK53_RS17020	0.15	-0.6
3,736,424	+		LRK53_RS17020	0.15	-1.8
3,736,425	-		LRK53_RS17020	0.15	-0.8
3,736,425	-		LRK53_RS17020	0.15	-1.7
3,736,425	-		LRK53_RS17020	0.15	-1.8
3,736,425	-		LRK53_RS17020	0.15	+1.1
3,736,425	-		LRK53_RS17020	0.15	-0.4
3,736,536	+		LRK53_RS17020	0.23	+3.0
3,736,537	-		LRK53_RS17020	0.23	-1.8
3,736,537	-		LRK53_RS17020	0.23	-1.4
3,736,537	-		LRK53_RS17020	0.23	-0.7
3,736,537	-		LRK53_RS17020	0.23	-1.0
3,736,568	+		LRK53_RS17020	0.25	-2.1
3,736,569	-		LRK53_RS17020	0.26	-1.1
3,736,608	-		LRK53_RS17020	0.28	-0.4
3,736,686	-		LRK53_RS17020	0.34	-0.2
3,736,686	-		LRK53_RS17020	0.34	-1.2
3,736,686	-		LRK53_RS17020	0.34	-2.1
3,736,686	-		LRK53_RS17020	0.34	-1.3
3,736,782	+		LRK53_RS17020	0.41	+0.0
3,736,782	+		LRK53_RS17020	0.41	-0.9
3,736,784	+		LRK53_RS17020	0.41	-1.9
3,736,784	+		LRK53_RS17020	0.41	+1.1
3,736,784	+		LRK53_RS17020	0.41	-1.0
3,736,785	-		LRK53_RS17020	0.41	-0.7
3,736,785	-		LRK53_RS17020	0.41	-0.4
3,736,837	+		LRK53_RS17020	0.45	-1.0
3,736,968	+		LRK53_RS17020	0.54	+0.9
3,736,969	-		LRK53_RS17020	0.54	-1.6
3,736,969	-		LRK53_RS17020	0.54	-0.3
3,736,969	-		LRK53_RS17020	0.54	+0.6
3,736,969	-		LRK53_RS17020	0.54	-3.0
3,736,969	-		LRK53_RS17020	0.54	-1.2
3,736,969	-		LRK53_RS17020	0.54	+1.2
3,736,969	-		LRK53_RS17020	0.54	-0.3
3,737,007	-		LRK53_RS17020	0.57	-1.3
3,737,132	-		LRK53_RS17020	0.66	+0.2
3,737,503	+				-0.2
3,737,504	-				-0.4
3,737,504	-				+0.1
3,737,504	-				+2.4
3,737,584	+				+0.8
3,737,584	+				-2.0
3,737,584	+				+1.5
3,737,584	+				+0.0
3,737,584	+				-2.6
3,737,585	-				-2.2
3,737,585	-				-1.4
3,737,625	+				-1.2
3,737,625	+				-1.9
3,737,625	+				-1.5
3,737,625	+				-0.7
3,737,625	+				+0.1
3,737,625	+				-1.7
3,737,625	+				-0.3
3,737,625	+				-0.4
3,737,625	+				+0.2
3,737,625	+				-0.7
3,737,625	+				-0.7
3,737,625	+				+1.0
3,737,625	+				-1.4
3,737,625	+				-0.6
3,737,625	+				-1.5
3,737,625	+				-1.4
3,737,626	-				+1.3
3,737,626	-				-2.5
3,737,626	-				-0.9
3,737,626	-				+1.4
3,737,626	-				-0.3
3,737,626	-				-1.0
3,737,626	-				-0.8
3,737,626	-				-1.0
3,737,704	+				+1.0
3,737,704	+				+0.8
3,737,705	-				-0.3
3,737,705	-				-2.3
3,737,753	-				+0.7
3,737,753	-				-1.1
3,737,753	-				-0.2
3,737,792	+		LRK53_RS17025	0.13	-1.8
3,737,792	+		LRK53_RS17025	0.13	-1.2
3,737,792	+		LRK53_RS17025	0.13	-1.8
3,737,793	-		LRK53_RS17025	0.13	-1.8
3,737,821	+		LRK53_RS17025	0.16	-2.1
3,737,821	+		LRK53_RS17025	0.16	-1.5
3,737,821	+		LRK53_RS17025	0.16	-1.1
3,737,821	+		LRK53_RS17025	0.16	+0.9
3,737,821	+		LRK53_RS17025	0.16	-0.7
3,737,821	+		LRK53_RS17025	0.16	-1.6
3,737,821	+		LRK53_RS17025	0.16	-0.9
3,737,821	+		LRK53_RS17025	0.16	-1.2
3,737,821	+		LRK53_RS17025	0.16	+0.2
3,737,821	+		LRK53_RS17025	0.16	+0.6
3,737,822	-		LRK53_RS17025	0.16	-0.4
3,737,822	-		LRK53_RS17025	0.16	-0.7
3,737,822	-		LRK53_RS17025	0.16	+0.0
3,737,822	-		LRK53_RS17025	0.16	+0.4
3,737,822	-		LRK53_RS17025	0.16	-0.4
3,737,822	-		LRK53_RS17025	0.16	-0.7
3,737,822	-		LRK53_RS17025	0.16	-2.3
3,737,822	-		LRK53_RS17025	0.16	-0.8
3,737,822	-		LRK53_RS17025	0.16	+0.6
3,737,822	-		LRK53_RS17025	0.16	-2.2
3,737,902	+		LRK53_RS17025	0.23	-1.2
3,737,902	+		LRK53_RS17025	0.23	-0.7
3,737,902	+		LRK53_RS17025	0.23	-0.3
3,737,903	-		LRK53_RS17025	0.23	-1.7
3,737,903	-		LRK53_RS17025	0.23	-0.4
3,737,903	-		LRK53_RS17025	0.23	-0.1
3,737,903	-		LRK53_RS17025	0.23	-1.7
3,737,929	-		LRK53_RS17025	0.25	-1.1
3,737,956	-		LRK53_RS17025	0.27	-0.7
3,738,166	+		LRK53_RS17025	0.45	+0.0
3,738,166	+		LRK53_RS17025	0.45	-2.3
3,738,167	-		LRK53_RS17025	0.46	-0.2
3,738,167	-		LRK53_RS17025	0.46	-1.0
3,738,167	-		LRK53_RS17025	0.46	-2.7
3,738,293	-		LRK53_RS17025	0.56	-0.2
3,738,328	+		LRK53_RS17025	0.59	+1.8
3,738,328	+		LRK53_RS17025	0.59	-1.1
3,738,328	+		LRK53_RS17025	0.59	+0.7
3,738,328	+		LRK53_RS17025	0.59	-1.6
3,738,328	+		LRK53_RS17025	0.59	-0.5
3,738,329	-		LRK53_RS17025	0.59	-3.3
3,738,329	-		LRK53_RS17025	0.59	+0.2
3,738,329	-		LRK53_RS17025	0.59	-0.4
3,738,329	-		LRK53_RS17025	0.59	-0.9
3,738,329	-		LRK53_RS17025	0.59	-0.2
3,738,329	-		LRK53_RS17025	0.59	+0.4
3,738,329	-		LRK53_RS17025	0.59	+2.1
3,738,329	-		LRK53_RS17025	0.59	-1.4
3,738,329	-		LRK53_RS17025	0.59	-1.3
3,738,329	-		LRK53_RS17025	0.59	+0.0
3,738,329	-		LRK53_RS17025	0.59	+0.0
3,738,329	-		LRK53_RS17025	0.59	-1.0
3,738,329	-		LRK53_RS17025	0.59	+0.3
3,738,329	-		LRK53_RS17025	0.59	+0.2
3,738,329	-		LRK53_RS17025	0.59	-1.7
3,738,329	-		LRK53_RS17025	0.59	+0.7
3,738,332	+		LRK53_RS17025	0.60	-0.9
3,738,332	+		LRK53_RS17025	0.60	+0.8
3,738,333	-		LRK53_RS17025	0.60	-0.2
3,738,454	+		LRK53_RS17025	0.70	-0.7
3,738,454	+		LRK53_RS17025	0.70	-0.9
3,738,454	+		LRK53_RS17025	0.70	-0.8
3,738,454	+		LRK53_RS17025	0.70	-1.4
3,738,454	+		LRK53_RS17025	0.70	-0.7
3,738,454	+		LRK53_RS17025	0.70	-0.7
3,738,454	+		LRK53_RS17025	0.70	+1.1
3,738,454	+		LRK53_RS17025	0.70	-1.9
3,738,454	+		LRK53_RS17025	0.70	-0.2
3,738,454	+		LRK53_RS17025	0.70	-1.6
3,738,454	+		LRK53_RS17025	0.70	-0.9
3,738,455	-		LRK53_RS17025	0.70	+0.6
3,738,455	-		LRK53_RS17025	0.70	-0.9
3,738,455	-		LRK53_RS17025	0.70	-1.0
3,738,455	-		LRK53_RS17025	0.70	-1.1
3,738,455	-		LRK53_RS17025	0.70	+0.0
3,738,455	-		LRK53_RS17025	0.70	-0.6
3,738,455	-		LRK53_RS17025	0.70	-0.2
3,738,455	-		LRK53_RS17025	0.70	-1.8
3,738,455	-		LRK53_RS17025	0.70	+0.0
3,738,455	-		LRK53_RS17025	0.70	-0.4
3,738,455	-		LRK53_RS17025	0.70	-2.0
3,738,455	-		LRK53_RS17025	0.70	-0.3
3,738,455	-		LRK53_RS17025	0.70	-1.3