Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS15215

Experiment: biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM
3,319,019	-		LRK53_RS15210	0.11	-0.5
3,319,019	-		LRK53_RS15210	0.11	-0.0
3,319,214	+		LRK53_RS15210	0.29	+0.1
3,319,214	+		LRK53_RS15210	0.29	-1.9
3,319,214	+		LRK53_RS15210	0.29	+1.0
3,319,214	+		LRK53_RS15210	0.29	-0.8
3,319,214	+		LRK53_RS15210	0.29	-1.9
3,319,214	+		LRK53_RS15210	0.29	-1.4
3,319,214	+		LRK53_RS15210	0.29	+0.4
3,319,214	+		LRK53_RS15210	0.29	-0.0
3,319,214	+		LRK53_RS15210	0.29	-1.4
3,319,215	-		LRK53_RS15210	0.29	+0.5
3,319,215	-		LRK53_RS15210	0.29	+0.8
3,319,215	-		LRK53_RS15210	0.29	-1.1
3,319,215	-		LRK53_RS15210	0.29	-0.1
3,319,215	-		LRK53_RS15210	0.29	+0.2
3,319,215	-		LRK53_RS15210	0.29	+0.2
3,319,215	-		LRK53_RS15210	0.29	-0.6
3,319,215	-		LRK53_RS15210	0.29	-2.3
3,319,215	-		LRK53_RS15210	0.29	+0.4
3,319,215	-		LRK53_RS15210	0.29	+0.3
3,319,215	-		LRK53_RS15210	0.29	+0.4
3,319,364	+		LRK53_RS15210	0.44	+0.2
3,319,364	+		LRK53_RS15210	0.44	+1.2
3,319,364	+		LRK53_RS15210	0.44	-0.7
3,319,364	+		LRK53_RS15210	0.44	+0.2
3,319,364	+		LRK53_RS15210	0.44	-1.0
3,319,364	+		LRK53_RS15210	0.44	-1.3
3,319,364	+		LRK53_RS15210	0.44	-0.1
3,319,364	+		LRK53_RS15210	0.44	-1.8
3,319,365	-		LRK53_RS15210	0.44	+0.4
3,319,365	-		LRK53_RS15210	0.44	-1.2
3,319,365	-		LRK53_RS15210	0.44	-1.0
3,319,365	-		LRK53_RS15210	0.44	+0.7
3,319,365	-		LRK53_RS15210	0.44	+1.1
3,319,365	-		LRK53_RS15210	0.44	+0.4
3,319,365	-		LRK53_RS15210	0.44	+1.0
3,319,373	+		LRK53_RS15210	0.45	-0.3
3,319,456	+		LRK53_RS15210	0.53	-0.7
3,319,456	+		LRK53_RS15210	0.53	-0.8
3,319,456	+		LRK53_RS15210	0.53	-0.5
3,319,456	+		LRK53_RS15210	0.53	-0.8
3,319,456	+		LRK53_RS15210	0.53	+0.4
3,319,457	-		LRK53_RS15210	0.53	-1.0
3,319,457	-		LRK53_RS15210	0.53	-1.3
3,319,457	-		LRK53_RS15210	0.53	-0.6
3,319,605	-		LRK53_RS15210	0.67	+1.4
3,319,605	-		LRK53_RS15210	0.67	-0.5
3,319,674	+		LRK53_RS15210	0.74	-0.7
3,319,675	-		LRK53_RS15210	0.74	+0.2
3,319,675	-		LRK53_RS15210	0.74	-1.8
3,319,829	+		LRK53_RS15210	0.89	-2.1
3,319,829	+		LRK53_RS15210	0.89	-3.0
3,319,829	+		LRK53_RS15210	0.89	-0.2
3,319,829	+		LRK53_RS15210	0.89	-0.5
3,319,830	-		LRK53_RS15210	0.89	+1.0
3,319,830	-		LRK53_RS15210	0.89	-0.4
3,320,149	+		LRK53_RS15215	0.23	-0.2
3,320,246	+		LRK53_RS15215	0.35	-0.5
3,320,246	+		LRK53_RS15215	0.35	-0.5
3,320,246	+		LRK53_RS15215	0.35	-1.1
3,320,246	+		LRK53_RS15215	0.35	+0.5
3,320,246	+		LRK53_RS15215	0.35	+0.4
3,320,246	+		LRK53_RS15215	0.35	-1.5
3,320,246	+		LRK53_RS15215	0.35	-0.2
3,320,246	+		LRK53_RS15215	0.35	-2.3
3,320,247	-		LRK53_RS15215	0.35	-1.2
3,320,247	-		LRK53_RS15215	0.35	-1.1
3,320,247	-		LRK53_RS15215	0.35	-1.3
3,320,247	-		LRK53_RS15215	0.35	-0.9
3,320,247	-		LRK53_RS15215	0.35	+0.1
3,320,247	-		LRK53_RS15215	0.35	+0.8
3,320,247	-		LRK53_RS15215	0.35	-0.0
3,320,247	-		LRK53_RS15215	0.35	-0.0
3,320,247	-		LRK53_RS15215	0.35	+0.0
3,320,247	-		LRK53_RS15215	0.35	-1.6
3,320,247	-		LRK53_RS15215	0.35	+1.0
3,320,247	-		LRK53_RS15215	0.35	-0.4
3,320,247	-		LRK53_RS15215	0.35	-1.6
3,320,824	+				-2.6
3,320,825	-				-1.2
3,320,825	-				+0.3
3,320,825	-				-1.2
3,320,825	-				+0.7
3,320,825	-				-1.5
3,320,825	-				-0.2
3,320,902	+				+0.4
3,320,902	+				-0.2
3,320,902	+				-1.6
3,320,902	+				-0.1
3,320,902	+				+0.3
3,320,902	+				-0.8
3,320,902	+				-0.4
3,320,902	+				+0.6
3,320,902	+				-0.2
3,320,902	+				+1.2
3,320,903	-				-1.5
3,320,903	-				+0.9
3,320,903	-				-0.5
3,320,903	-				-0.1
3,320,903	-				+0.5
3,320,903	-				+0.1
3,320,903	-				+0.2
3,321,199	+				-0.4
3,321,199	+				-0.2
3,321,199	+				-1.1
3,321,199	+				+2.0
3,321,199	+				-1.3
3,321,200	-				-0.1
3,321,200	-				+3.0
3,321,200	-				-1.2
3,321,200	-				-0.8
3,321,200	-				+0.4
3,321,200	-				-2.1
3,321,200	-				+0.2
3,321,317	+				+1.2
3,321,317	+				-1.4
3,321,317	+				-0.1
3,321,317	+				-0.8
3,321,317	+				-2.0
3,321,317	+				-0.1
3,321,317	+				-0.6
3,321,317	+				-0.4
3,321,317	+				-0.4
3,321,317	+				-1.4
3,321,317	+				-0.5
3,321,317	+				-1.3
3,321,317	+				-1.0
3,321,317	+				-2.2
3,321,317	+				-1.7
3,321,317	+				-1.9
3,321,317	+				+0.2
3,321,317	+				+0.6
3,321,317	+				+0.3
3,321,317	+				-0.3
3,321,317	+				-1.5
3,321,317	+				-2.4
3,321,317	+				+0.4
3,321,317	+				-1.3
3,321,317	+				+1.7
3,321,317	+				-0.2
3,321,317	+				-2.0
3,321,317	+				-0.4
3,321,317	+				-0.7
3,321,317	+				-1.5
3,321,317	+				-0.2
3,321,317	+				+0.2
3,321,317	+				-1.0
3,321,318	-				-2.7
3,321,318	-				-1.5
3,321,318	-				-0.6
3,321,318	-				-0.6
3,321,318	-				-0.0
3,321,318	-				-1.2
3,321,318	-				-1.6
3,321,318	-				-1.3
3,321,318	-				-2.5
3,321,318	-				-0.9
3,321,318	-				+0.5
3,321,318	-				+0.9
3,321,318	-				+0.1
3,321,318	-				+1.8
3,321,318	-				-1.1
3,321,318	-				-0.7
3,321,318	-				+2.0
3,321,318	-				-1.6
3,321,318	-				-0.2
3,321,318	-				-1.7
3,321,318	-				-1.8
3,321,318	-				-0.5
3,321,318	-				-0.5
3,321,318	-				-1.7
3,321,318	-				-2.7
3,321,318	-				-0.6
3,321,318	-				-1.0
3,321,318	-				-0.7
3,321,318	-				+0.0
3,321,318	-				-0.0
3,321,318	-				+0.9
3,321,318	-				+1.5
3,321,318	-				-1.0
3,321,318	-				-1.6
3,321,318	-				-0.3
3,321,318	-				+1.6
3,321,318	-				-1.0
3,321,319	+				-2.4
3,321,319	+				-0.2
3,321,319	+				-1.5
3,321,319	+				+0.4
3,321,319	+				+1.1
3,321,319	+				-0.7
3,321,320	-				+0.9
3,321,320	-				-2.4
3,321,320	-				-0.8
3,321,320	-				-1.6
3,321,320	-				+0.3
3,321,394	+		LRK53_RS15220	0.11	-1.2
3,321,394	+		LRK53_RS15220	0.11	-1.6
3,321,394	+		LRK53_RS15220	0.11	-2.5
3,321,394	+		LRK53_RS15220	0.11	-1.1
3,321,394	+		LRK53_RS15220	0.11	-3.2
3,321,394	+		LRK53_RS15220	0.11	-0.7
3,321,394	+		LRK53_RS15220	0.11	-0.6
3,321,394	+		LRK53_RS15220	0.11	-0.9
3,321,394	+		LRK53_RS15220	0.11	-2.4
3,321,394	+		LRK53_RS15220	0.11	-1.2
3,321,394	+		LRK53_RS15220	0.11	-1.4
3,321,395	-		LRK53_RS15220	0.11	-1.0
3,321,395	-		LRK53_RS15220	0.11	-2.7
3,321,395	-		LRK53_RS15220	0.11	+0.2
3,321,395	-		LRK53_RS15220	0.11	-0.4
3,321,395	-		LRK53_RS15220	0.11	-0.5
3,321,395	-		LRK53_RS15220	0.11	-1.6
3,321,395	-		LRK53_RS15220	0.11	-1.1
3,321,395	-		LRK53_RS15220	0.11	-1.4
3,321,395	-		LRK53_RS15220	0.11	-1.6
3,321,600	+		LRK53_RS15220	0.23	-0.3
3,321,600	+		LRK53_RS15220	0.23	-0.3
3,321,600	+		LRK53_RS15220	0.23	-0.6
3,321,600	+		LRK53_RS15220	0.23	-1.0
3,321,601	-		LRK53_RS15220	0.23	-1.3
3,321,601	-		LRK53_RS15220	0.23	-1.1
3,321,601	-		LRK53_RS15220	0.23	-1.5
3,321,601	-		LRK53_RS15220	0.23	-1.5
3,321,601	-		LRK53_RS15220	0.23	-0.0
3,321,610	+		LRK53_RS15220	0.24	-0.0
3,321,610	+		LRK53_RS15220	0.24	-0.8
3,321,610	+		LRK53_RS15220	0.24	-0.9
3,321,610	+		LRK53_RS15220	0.24	+0.4
3,321,610	+		LRK53_RS15220	0.24	+0.5
3,321,611	-		LRK53_RS15220	0.24	-0.9
3,321,611	-		LRK53_RS15220	0.24	-2.0
3,321,611	-		LRK53_RS15220	0.24	+0.6
3,321,706	+		LRK53_RS15220	0.29	-1.7
3,321,706	+		LRK53_RS15220	0.29	-1.4
3,321,706	+		LRK53_RS15220	0.29	-2.5
3,321,706	+		LRK53_RS15220	0.29	-1.4
3,321,706	+		LRK53_RS15220	0.29	-1.9
3,321,706	+		LRK53_RS15220	0.29	-1.0
3,321,706	+		LRK53_RS15220	0.29	-0.6
3,321,706	+		LRK53_RS15220	0.29	-0.8
3,321,706	+		LRK53_RS15220	0.29	-0.8
3,321,706	+		LRK53_RS15220	0.29	-0.0
3,321,706	+		LRK53_RS15220	0.29	-1.5
3,321,706	+		LRK53_RS15220	0.29	-0.6
3,321,706	+		LRK53_RS15220	0.29	-1.7
3,321,706	+		LRK53_RS15220	0.29	-0.2
3,321,706	+		LRK53_RS15220	0.29	-0.4
3,321,706	+		LRK53_RS15220	0.29	-0.3
3,321,707	-		LRK53_RS15220	0.30	+0.5
3,321,707	-		LRK53_RS15220	0.30	-0.7
3,321,707	-		LRK53_RS15220	0.30	+1.6
3,321,707	-		LRK53_RS15220	0.30	-1.9
3,321,707	-		LRK53_RS15220	0.30	-0.1
3,321,707	-		LRK53_RS15220	0.30	+1.4
3,321,707	-		LRK53_RS15220	0.30	-3.1
3,321,707	-		LRK53_RS15220	0.30	-0.7
3,321,707	-		LRK53_RS15220	0.30	-0.6
3,321,707	-		LRK53_RS15220	0.30	+0.5
3,321,707	-		LRK53_RS15220	0.30	-1.3
3,321,707	-		LRK53_RS15220	0.30	-1.7
3,321,707	-		LRK53_RS15220	0.30	-0.2
3,321,707	-		LRK53_RS15220	0.30	-1.1
3,321,707	-		LRK53_RS15220	0.30	-1.1
3,321,707	-		LRK53_RS15220	0.30	+1.0
3,321,707	-		LRK53_RS15220	0.30	-0.2
3,321,707	-		LRK53_RS15220	0.30	-0.7
3,321,707	-		LRK53_RS15220	0.30	+0.2
3,321,707	-		LRK53_RS15220	0.30	+0.8
3,321,707	-		LRK53_RS15220	0.30	-2.3
3,321,707	-		LRK53_RS15220	0.30	-0.5