Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS14845

Experiment: biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM
3,248,089	+		LRK53_RS14840	0.15	-0.6
3,248,134	+		LRK53_RS14840	0.19	+0.2
3,248,173	+		LRK53_RS14840	0.23	+0.4
3,248,173	+		LRK53_RS14840	0.23	-0.4
3,248,173	+		LRK53_RS14840	0.23	-0.5
3,248,173	+		LRK53_RS14840	0.23	-1.4
3,248,281	+		LRK53_RS14840	0.32	-0.0
3,248,281	+		LRK53_RS14840	0.32	+1.0
3,248,282	-		LRK53_RS14840	0.32	+0.4
3,248,282	-		LRK53_RS14840	0.32	-0.7
3,248,285	+		LRK53_RS14840	0.32	-0.5
3,248,286	-		LRK53_RS14840	0.32	-0.0
3,248,286	-		LRK53_RS14840	0.32	-0.2
3,248,286	-		LRK53_RS14840	0.32	-0.0
3,248,286	-		LRK53_RS14840	0.32	-0.4
3,248,338	+		LRK53_RS14840	0.37	-2.2
3,248,339	-		LRK53_RS14840	0.37	-0.4
3,248,339	-		LRK53_RS14840	0.37	+0.4
3,248,854	+		LRK53_RS14840	0.81	-0.2
3,249,132	-				-2.3
3,249,164	+				-2.3
3,249,164	+				+0.2
3,249,165	-				+0.6
3,249,165	-				+1.3
3,249,165	-				+0.2
3,249,165	-				-1.8
3,249,165	-				+1.2
3,249,165	-				-0.8
3,249,165	-				+0.3
3,249,165	-				-0.7
3,249,165	-				-1.3
3,249,165	-				+2.0
3,249,165	-				+1.1
3,249,165	-				+0.7
3,249,200	+		LRK53_RS14845	0.10	+0.6
3,249,200	+		LRK53_RS14845	0.10	+0.2
3,249,200	+		LRK53_RS14845	0.10	+0.5
3,249,200	+		LRK53_RS14845	0.10	-0.2
3,249,200	+		LRK53_RS14845	0.10	+0.3
3,249,200	+		LRK53_RS14845	0.10	-0.4
3,249,201	-		LRK53_RS14845	0.10	+1.4
3,249,201	-		LRK53_RS14845	0.10	+0.4
3,249,230	+		LRK53_RS14845	0.13	+0.6
3,249,230	+		LRK53_RS14845	0.13	-0.5
3,249,230	+		LRK53_RS14845	0.13	+0.7
3,249,230	+		LRK53_RS14845	0.13	-0.5
3,249,230	+		LRK53_RS14845	0.13	-0.2
3,249,230	+		LRK53_RS14845	0.13	+0.4
3,249,230	+		LRK53_RS14845	0.13	-0.3
3,249,231	-		LRK53_RS14845	0.13	-0.2
3,249,231	-		LRK53_RS14845	0.13	+1.4
3,249,231	-		LRK53_RS14845	0.13	-0.3
3,249,231	-		LRK53_RS14845	0.13	-0.9
3,249,231	-		LRK53_RS14845	0.13	-0.7
3,249,288	-		LRK53_RS14845	0.18	-1.2
3,249,464	+		LRK53_RS14845	0.34	+0.2
3,249,497	+		LRK53_RS14845	0.37	+1.0
3,249,497	+		LRK53_RS14845	0.37	+1.6
3,249,497	+		LRK53_RS14845	0.37	+0.6
3,249,498	-		LRK53_RS14845	0.37	-0.4
3,249,498	-		LRK53_RS14845	0.37	+0.1
3,249,564	+		LRK53_RS14845	0.43	+2.0
3,249,564	+		LRK53_RS14845	0.43	-0.2
3,249,565	-		LRK53_RS14845	0.43	-2.1
3,249,565	-		LRK53_RS14845	0.43	-0.4
3,249,572	+		LRK53_RS14845	0.44	-1.3
3,249,572	+		LRK53_RS14845	0.44	+1.2
3,249,572	+		LRK53_RS14845	0.44	-1.1
3,249,572	+		LRK53_RS14845	0.44	-1.1
3,249,572	+		LRK53_RS14845	0.44	+0.4
3,249,572	+		LRK53_RS14845	0.44	-2.2
3,249,573	-		LRK53_RS14845	0.44	-0.2
3,249,573	-		LRK53_RS14845	0.44	+0.7
3,249,573	-		LRK53_RS14845	0.44	-0.1
3,249,573	-		LRK53_RS14845	0.44	-0.7
3,249,573	-		LRK53_RS14845	0.44	+1.0
3,249,573	-		LRK53_RS14845	0.44	-1.3
3,249,573	-		LRK53_RS14845	0.44	-0.5
3,249,573	-		LRK53_RS14845	0.44	-1.2
3,249,573	-		LRK53_RS14845	0.44	+0.5
3,249,573	-		LRK53_RS14845	0.44	-0.6
3,249,573	-		LRK53_RS14845	0.44	-0.2
3,249,573	-		LRK53_RS14845	0.44	+2.6
3,249,573	-		LRK53_RS14845	0.44	+0.4
3,249,573	-		LRK53_RS14845	0.44	-1.4
3,249,573	-		LRK53_RS14845	0.44	-0.8
3,249,573	-		LRK53_RS14845	0.44	-1.7
3,249,573	-		LRK53_RS14845	0.44	-0.2
3,249,573	-		LRK53_RS14845	0.44	-1.9
3,249,573	-		LRK53_RS14845	0.44	-0.4
3,249,629	+		LRK53_RS14845	0.49	-1.7
3,249,629	+		LRK53_RS14845	0.49	+0.2
3,249,629	+		LRK53_RS14845	0.49	-0.7
3,249,629	+		LRK53_RS14845	0.49	+1.2
3,249,629	+		LRK53_RS14845	0.49	+0.4
3,249,630	-		LRK53_RS14845	0.49	+0.3
3,249,630	-		LRK53_RS14845	0.49	-1.2
3,249,630	-		LRK53_RS14845	0.49	+0.6
3,249,630	-		LRK53_RS14845	0.49	-1.3
3,249,630	-		LRK53_RS14845	0.49	-0.2
3,249,630	-		LRK53_RS14845	0.49	-0.4
3,249,630	-		LRK53_RS14845	0.49	-0.1
3,249,662	+		LRK53_RS14845	0.52	+0.1
3,249,662	+		LRK53_RS14845	0.52	+1.1
3,249,662	+		LRK53_RS14845	0.52	+0.6
3,249,663	-		LRK53_RS14845	0.52	-0.6
3,249,940	+		LRK53_RS14845	0.77	+1.4
3,249,940	+		LRK53_RS14845	0.77	-0.0
3,249,940	+		LRK53_RS14845	0.77	+0.5
3,249,940	+		LRK53_RS14845	0.77	-1.4
3,249,940	+		LRK53_RS14845	0.77	-0.9
3,249,940	+		LRK53_RS14845	0.77	-0.8
3,249,940	+		LRK53_RS14845	0.77	-0.3
3,249,940	+		LRK53_RS14845	0.77	+0.7
3,249,940	+		LRK53_RS14845	0.77	+1.4
3,249,941	-		LRK53_RS14845	0.77	-2.6
3,249,941	-		LRK53_RS14845	0.77	+1.4
3,249,941	-		LRK53_RS14845	0.77	-0.4
3,249,941	-		LRK53_RS14845	0.77	+3.0
3,249,941	-		LRK53_RS14845	0.77	-1.7
3,249,941	-		LRK53_RS14845	0.77	+0.3
3,249,941	-		LRK53_RS14845	0.77	-0.3
3,249,983	+		LRK53_RS14845	0.81	-0.4
3,249,983	+		LRK53_RS14845	0.81	-1.1
3,249,984	-		LRK53_RS14845	0.81	+0.2
3,250,064	+		LRK53_RS14845	0.88	-1.5
3,250,064	+		LRK53_RS14845	0.88	-1.0
3,250,064	+		LRK53_RS14845	0.88	-0.4
3,250,065	-		LRK53_RS14845	0.88	-1.9
3,250,065	-		LRK53_RS14845	0.88	-0.5
3,250,065	-		LRK53_RS14845	0.88	+0.2
3,250,362	+				-1.6
3,250,470	+				-0.6
3,250,470	+				-0.0
3,250,470	+				-0.0
3,250,471	-				-1.1
3,250,471	-				+0.9
3,250,471	-				-2.2
3,250,471	-				+0.4
3,250,471	-				-1.2
3,250,713	+		LRK53_RS14850	0.22	+0.6
3,250,713	+		LRK53_RS14850	0.22	+0.4
3,250,714	-		LRK53_RS14850	0.22	-0.9
3,250,714	-		LRK53_RS14850	0.22	+0.3
3,250,714	-		LRK53_RS14850	0.22	-1.6
3,250,899	+		LRK53_RS14850	0.35	+1.6
3,250,899	+		LRK53_RS14850	0.35	+0.1
3,250,899	+		LRK53_RS14850	0.35	-0.9
3,250,899	+		LRK53_RS14850	0.35	-2.2
3,250,899	+		LRK53_RS14850	0.35	+0.5
3,250,899	+		LRK53_RS14850	0.35	-2.3
3,250,900	-		LRK53_RS14850	0.36	-2.0
3,250,900	-		LRK53_RS14850	0.36	+1.1
3,250,908	+		LRK53_RS14850	0.36	+0.2
3,250,908	+		LRK53_RS14850	0.36	-0.5
3,250,908	+		LRK53_RS14850	0.36	-1.6
3,250,908	+		LRK53_RS14850	0.36	-2.2
3,250,908	+		LRK53_RS14850	0.36	-1.0
3,250,908	+		LRK53_RS14850	0.36	+0.2
3,250,908	+		LRK53_RS14850	0.36	-1.3
3,250,908	+		LRK53_RS14850	0.36	-0.9
3,250,908	+		LRK53_RS14850	0.36	-0.8
3,250,908	+		LRK53_RS14850	0.36	-0.8
3,250,908	+		LRK53_RS14850	0.36	-0.0
3,250,909	-		LRK53_RS14850	0.36	+1.2
3,250,909	-		LRK53_RS14850	0.36	-0.2
3,250,909	-		LRK53_RS14850	0.36	-0.5
3,250,909	-		LRK53_RS14850	0.36	-0.6
3,250,909	-		LRK53_RS14850	0.36	-0.0
3,250,909	-		LRK53_RS14850	0.36	-0.4
3,250,909	-		LRK53_RS14850	0.36	+0.4
3,250,909	-		LRK53_RS14850	0.36	-0.1
3,250,909	-		LRK53_RS14850	0.36	+0.4
3,250,909	-		LRK53_RS14850	0.36	-1.7
3,250,923	+		LRK53_RS14850	0.37	-0.4
3,250,923	+		LRK53_RS14850	0.37	-0.7
3,250,923	+		LRK53_RS14850	0.37	-0.4
3,250,923	+		LRK53_RS14850	0.37	+2.5
3,250,924	-		LRK53_RS14850	0.37	-2.5
3,250,924	-		LRK53_RS14850	0.37	-0.6
3,250,924	-		LRK53_RS14850	0.37	-0.6
3,250,924	-		LRK53_RS14850	0.37	+0.1
3,250,924	-		LRK53_RS14850	0.37	-0.8
3,251,176	-		LRK53_RS14850	0.56	-1.7
3,251,176	-		LRK53_RS14850	0.56	-0.2