Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS14280

Experiment: biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM
3,131,574	+				-0.6
3,131,601	-				-1.0
3,131,610	+				+0.4
3,131,610	+				+0.6
3,131,611	-				-3.0
3,131,611	-				-0.2
3,131,696	+				-1.3
3,131,697	-				-0.6
3,131,697	-				+0.8
3,131,738	+				+0.7
3,131,810	+		LRK53_RS14275	0.11	-1.7
3,131,810	+		LRK53_RS14275	0.11	-1.8
3,131,810	+		LRK53_RS14275	0.11	-1.8
3,131,810	+		LRK53_RS14275	0.11	+0.1
3,131,811	-		LRK53_RS14275	0.11	-0.5
3,131,811	-		LRK53_RS14275	0.11	+1.7
3,131,817	+		LRK53_RS14275	0.12	+0.2
3,131,828	+		LRK53_RS14275	0.13	+0.0
3,131,828	+		LRK53_RS14275	0.13	+0.5
3,131,828	+		LRK53_RS14275	0.13	-0.4
3,131,828	+		LRK53_RS14275	0.13	-2.4
3,131,828	+		LRK53_RS14275	0.13	-0.7
3,131,829	-		LRK53_RS14275	0.14	-0.2
3,131,829	-		LRK53_RS14275	0.14	-0.0
3,131,829	-		LRK53_RS14275	0.14	-1.3
3,131,936	+		LRK53_RS14275	0.29	+0.9
3,131,936	+		LRK53_RS14275	0.29	-1.0
3,131,936	+		LRK53_RS14275	0.29	-1.8
3,131,936	+		LRK53_RS14275	0.29	-0.5
3,131,936	+		LRK53_RS14275	0.29	-0.4
3,131,936	+		LRK53_RS14275	0.29	-1.4
3,131,936	+		LRK53_RS14275	0.29	+0.8
3,131,936	+		LRK53_RS14275	0.29	-1.5
3,131,936	+		LRK53_RS14275	0.29	+0.3
3,131,936	+		LRK53_RS14275	0.29	-1.0
3,131,936	+		LRK53_RS14275	0.29	-0.2
3,131,936	+		LRK53_RS14275	0.29	-0.3
3,131,936	+		LRK53_RS14275	0.29	-1.8
3,131,937	-		LRK53_RS14275	0.30	-0.6
3,131,937	-		LRK53_RS14275	0.30	-0.4
3,131,937	-		LRK53_RS14275	0.30	-0.8
3,131,937	-		LRK53_RS14275	0.30	-1.0
3,131,937	-		LRK53_RS14275	0.30	-0.9
3,131,937	-		LRK53_RS14275	0.30	+0.2
3,131,937	-		LRK53_RS14275	0.30	+0.8
3,131,937	-		LRK53_RS14275	0.30	-0.9
3,131,937	-		LRK53_RS14275	0.30	+0.4
3,131,937	-		LRK53_RS14275	0.30	-1.4
3,131,937	-		LRK53_RS14275	0.30	-0.9
3,131,937	-		LRK53_RS14275	0.30	-0.6
3,131,937	-		LRK53_RS14275	0.30	+0.5
3,131,937	-		LRK53_RS14275	0.30	-0.9
3,131,937	-		LRK53_RS14275	0.30	+0.4
3,131,937	-		LRK53_RS14275	0.30	-0.7
3,131,937	-		LRK53_RS14275	0.30	+0.4
3,131,937	-		LRK53_RS14275	0.30	+3.0
3,131,937	-		LRK53_RS14275	0.30	+1.2
3,131,937	-		LRK53_RS14275	0.30	+1.0
3,131,937	-		LRK53_RS14275	0.30	-2.1
3,131,937	-		LRK53_RS14275	0.30	-1.9
3,131,937	-		LRK53_RS14275	0.30	-1.6
3,131,947	+		LRK53_RS14275	0.31	-1.4
3,131,981	+		LRK53_RS14275	0.36	-1.3
3,131,981	+		LRK53_RS14275	0.36	-1.2
3,131,981	+		LRK53_RS14275	0.36	-0.9
3,131,981	+		LRK53_RS14275	0.36	-0.7
3,131,981	+		LRK53_RS14275	0.36	-1.4
3,131,981	+		LRK53_RS14275	0.36	+0.8
3,131,981	+		LRK53_RS14275	0.36	-0.2
3,131,981	+		LRK53_RS14275	0.36	+0.8
3,131,981	-		LRK53_RS14275	0.36	-1.7
3,131,982	-		LRK53_RS14275	0.36	+0.4
3,131,982	-		LRK53_RS14275	0.36	-0.3
3,131,982	-		LRK53_RS14275	0.36	-0.6
3,131,982	-		LRK53_RS14275	0.36	-0.6
3,131,982	-		LRK53_RS14275	0.36	+1.5
3,131,982	-		LRK53_RS14275	0.36	+1.0
3,132,272	-		LRK53_RS14275	0.79	-0.8
3,132,418	+				-1.4
3,132,418	+				+0.4
3,132,419	-				-0.0
3,132,419	-				-0.6
3,132,419	-				-1.5
3,132,419	-				-0.1
3,132,419	-				-0.2
3,132,419	-				-1.0
3,132,447	+				-0.8
3,132,447	+				+2.0
3,132,447	+				-0.8
3,132,593	+		LRK53_RS14280	0.23	-0.3
3,132,594	-		LRK53_RS14280	0.23	-2.4
3,132,594	-		LRK53_RS14280	0.23	-1.9
3,132,602	+		LRK53_RS14280	0.25	-1.5
3,132,602	+		LRK53_RS14280	0.25	-0.5
3,132,602	+		LRK53_RS14280	0.25	-1.3
3,132,602	+		LRK53_RS14280	0.25	-0.7
3,132,602	+		LRK53_RS14280	0.25	+1.4
3,132,602	+		LRK53_RS14280	0.25	+1.1
3,132,602	+		LRK53_RS14280	0.25	+2.7
3,132,602	+		LRK53_RS14280	0.25	-1.1
3,132,602	+		LRK53_RS14280	0.25	+1.8
3,132,602	+		LRK53_RS14280	0.25	+1.7
3,132,603	-		LRK53_RS14280	0.25	-0.2
3,132,603	-		LRK53_RS14280	0.25	-1.9
3,132,603	-		LRK53_RS14280	0.25	-1.1
3,132,603	-		LRK53_RS14280	0.25	-0.6
3,132,603	-		LRK53_RS14280	0.25	-0.9
3,132,603	-		LRK53_RS14280	0.25	-0.1
3,132,629	+		LRK53_RS14280	0.31	-0.7
3,132,629	+		LRK53_RS14280	0.31	-1.3
3,132,629	+		LRK53_RS14280	0.31	-1.2
3,132,629	+		LRK53_RS14280	0.31	-0.3
3,132,629	+		LRK53_RS14280	0.31	-0.3
3,132,629	+		LRK53_RS14280	0.31	-2.1
3,132,629	+		LRK53_RS14280	0.31	+1.2
3,132,629	+		LRK53_RS14280	0.31	+0.4
3,132,629	+		LRK53_RS14280	0.31	-0.3
3,132,629	+		LRK53_RS14280	0.31	+0.4
3,132,629	+		LRK53_RS14280	0.31	-2.3
3,132,629	+		LRK53_RS14280	0.31	-0.7
3,132,629	+		LRK53_RS14280	0.31	+1.4
3,132,629	+		LRK53_RS14280	0.31	+0.3
3,132,629	+		LRK53_RS14280	0.31	-1.1
3,132,629	+		LRK53_RS14280	0.31	-1.8
3,132,629	+		LRK53_RS14280	0.31	-0.4
3,132,629	+		LRK53_RS14280	0.31	-1.3
3,132,629	+		LRK53_RS14280	0.31	+1.1
3,132,629	+		LRK53_RS14280	0.31	-0.8
3,132,629	+		LRK53_RS14280	0.31	-0.0
3,132,629	+		LRK53_RS14280	0.31	-0.1
3,132,629	+		LRK53_RS14280	0.31	-0.6
3,132,629	+		LRK53_RS14280	0.31	-0.2
3,132,629	+		LRK53_RS14280	0.31	+1.1
3,132,630	-		LRK53_RS14280	0.31	-0.3
3,132,630	-		LRK53_RS14280	0.31	-2.6
3,132,630	-		LRK53_RS14280	0.31	-1.5
3,132,630	-		LRK53_RS14280	0.31	-1.9
3,132,630	-		LRK53_RS14280	0.31	-0.2
3,132,630	-		LRK53_RS14280	0.31	-0.1
3,132,630	-		LRK53_RS14280	0.31	-2.2
3,132,630	-		LRK53_RS14280	0.31	+0.1
3,132,630	-		LRK53_RS14280	0.31	-0.7
3,132,630	-		LRK53_RS14280	0.31	-1.0
3,132,630	-		LRK53_RS14280	0.31	-1.8
3,132,630	-		LRK53_RS14280	0.31	-1.1
3,132,630	-		LRK53_RS14280	0.31	+0.7
3,132,630	-		LRK53_RS14280	0.31	+1.2
3,132,630	-		LRK53_RS14280	0.31	-2.9
3,132,630	-		LRK53_RS14280	0.31	-0.2
3,132,630	-		LRK53_RS14280	0.31	+0.9
3,132,630	-		LRK53_RS14280	0.31	+0.4
3,132,630	-		LRK53_RS14280	0.31	-1.1
3,132,630	-		LRK53_RS14280	0.31	+0.2
3,132,631	+		LRK53_RS14280	0.31	-0.5
3,132,631	+		LRK53_RS14280	0.31	+2.5
3,132,795	+		LRK53_RS14280	0.66	-0.5
3,132,820	+		LRK53_RS14280	0.72	-1.7
3,132,820	+		LRK53_RS14280	0.72	-1.2
3,132,820	+		LRK53_RS14280	0.72	-0.0
3,132,820	+		LRK53_RS14280	0.72	-2.0
3,132,820	+		LRK53_RS14280	0.72	+0.7
3,132,820	+		LRK53_RS14280	0.72	-1.3
3,132,820	+		LRK53_RS14280	0.72	+2.6
3,132,820	+		LRK53_RS14280	0.72	+1.4
3,132,820	+		LRK53_RS14280	0.72	+1.5
3,132,820	+		LRK53_RS14280	0.72	-0.2
3,132,821	-		LRK53_RS14280	0.72	-0.9
3,132,821	-		LRK53_RS14280	0.72	-0.3
3,132,821	-		LRK53_RS14280	0.72	-0.3
3,132,821	-		LRK53_RS14280	0.72	+0.8
3,132,821	-		LRK53_RS14280	0.72	-0.6
3,132,821	-		LRK53_RS14280	0.72	+0.3
3,132,940	-				+0.2
3,132,940	-				-2.1
3,133,013	+				-0.7
3,133,013	+				-1.0
3,133,013	+				-0.5
3,133,013	+				-1.6
3,133,014	-				+0.2
3,133,137	+		LRK53_RS14285	0.31	+0.3
3,133,137	+		LRK53_RS14285	0.31	+0.4
3,133,137	+		LRK53_RS14285	0.31	-2.1
3,133,137	+		LRK53_RS14285	0.31	+0.6
3,133,137	+		LRK53_RS14285	0.31	-1.2
3,133,137	+		LRK53_RS14285	0.31	+0.1
3,133,138	-		LRK53_RS14285	0.32	-0.6
3,133,138	-		LRK53_RS14285	0.32	+0.4
3,133,138	-		LRK53_RS14285	0.32	-0.2
3,133,138	-		LRK53_RS14285	0.32	-0.5
3,133,138	-		LRK53_RS14285	0.32	-1.7
3,133,167	+		LRK53_RS14285	0.54	-1.9
3,133,167	+		LRK53_RS14285	0.54	-1.0
3,133,167	+		LRK53_RS14285	0.54	+0.0
3,133,167	+		LRK53_RS14285	0.54	+0.9
3,133,167	+		LRK53_RS14285	0.54	-0.4
3,133,167	+		LRK53_RS14285	0.54	-0.5
3,133,168	-		LRK53_RS14285	0.55	+0.2
3,133,168	-		LRK53_RS14285	0.55	-0.6
3,133,168	-		LRK53_RS14285	0.55	-0.0
3,133,168	-		LRK53_RS14285	0.55	+1.8
3,133,194	+		LRK53_RS14285	0.75	-1.3