Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS08930

Experiment: biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM
1,998,776	+		LRK53_RS08925	0.28	-0.8
1,998,776	+		LRK53_RS08925	0.28	+0.3
1,998,777	-		LRK53_RS08925	0.28	-0.7
1,998,777	-		LRK53_RS08925	0.28	+0.6
1,998,777	-		LRK53_RS08925	0.28	-1.3
1,998,784	+		LRK53_RS08925	0.28	-0.4
1,998,784	+		LRK53_RS08925	0.28	-1.7
1,998,784	+		LRK53_RS08925	0.28	-1.3
1,998,784	+		LRK53_RS08925	0.28	-1.8
1,998,784	+		LRK53_RS08925	0.28	-1.8
1,998,784	+		LRK53_RS08925	0.28	-1.5
1,998,784	+		LRK53_RS08925	0.28	-0.7
1,998,784	+		LRK53_RS08925	0.28	-0.5
1,998,784	+		LRK53_RS08925	0.28	-2.4
1,998,784	+		LRK53_RS08925	0.28	-0.6
1,998,784	+		LRK53_RS08925	0.28	-1.9
1,998,784	+		LRK53_RS08925	0.28	-2.0
1,998,784	+		LRK53_RS08925	0.28	+0.3
1,998,784	+		LRK53_RS08925	0.28	-1.0
1,998,784	+		LRK53_RS08925	0.28	-1.3
1,998,784	+		LRK53_RS08925	0.28	-0.9
1,998,784	+		LRK53_RS08925	0.28	-0.7
1,998,784	+		LRK53_RS08925	0.28	-1.1
1,998,784	+		LRK53_RS08925	0.28	+2.0
1,998,784	+		LRK53_RS08925	0.28	-1.6
1,998,784	+		LRK53_RS08925	0.28	-0.6
1,998,784	+		LRK53_RS08925	0.28	+0.3
1,998,785	-		LRK53_RS08925	0.29	-0.8
1,998,785	-		LRK53_RS08925	0.29	-0.3
1,998,785	-		LRK53_RS08925	0.29	-0.4
1,998,785	-		LRK53_RS08925	0.29	-2.5
1,998,785	-		LRK53_RS08925	0.29	-0.6
1,998,785	-		LRK53_RS08925	0.29	-1.6
1,998,785	-		LRK53_RS08925	0.29	+0.2
1,998,785	-		LRK53_RS08925	0.29	-0.8
1,998,785	-		LRK53_RS08925	0.29	-1.3
1,998,785	-		LRK53_RS08925	0.29	-1.5
1,998,785	-		LRK53_RS08925	0.29	-0.8
1,998,785	-		LRK53_RS08925	0.29	+1.2
1,998,785	-		LRK53_RS08925	0.29	-1.6
1,998,863	+		LRK53_RS08925	0.36	-1.2
1,998,863	+		LRK53_RS08925	0.36	+0.4
1,998,863	+		LRK53_RS08925	0.36	-0.6
1,998,863	+		LRK53_RS08925	0.36	-1.1
1,998,863	+		LRK53_RS08925	0.36	-1.1
1,998,864	-		LRK53_RS08925	0.37	-1.5
1,998,864	-		LRK53_RS08925	0.37	-1.0
1,998,864	-		LRK53_RS08925	0.37	-0.8
1,998,864	-		LRK53_RS08925	0.37	+0.4
1,998,864	-		LRK53_RS08925	0.37	-2.3
1,998,864	-		LRK53_RS08925	0.37	-2.5
1,999,041	+		LRK53_RS08925	0.54	+1.5
1,999,041	+		LRK53_RS08925	0.54	+1.3
1,999,041	+		LRK53_RS08925	0.54	-1.3
1,999,041	+		LRK53_RS08925	0.54	-1.7
1,999,041	+		LRK53_RS08925	0.54	+0.3
1,999,041	+		LRK53_RS08925	0.54	+1.2
1,999,041	+		LRK53_RS08925	0.54	-0.8
1,999,041	+		LRK53_RS08925	0.54	+0.8
1,999,041	+		LRK53_RS08925	0.54	-0.2
1,999,041	+		LRK53_RS08925	0.54	+0.2
1,999,041	+		LRK53_RS08925	0.54	-2.8
1,999,041	+		LRK53_RS08925	0.54	+0.1
1,999,041	+		LRK53_RS08925	0.54	-1.7
1,999,041	+		LRK53_RS08925	0.54	-0.0
1,999,041	+		LRK53_RS08925	0.54	-0.2
1,999,041	+		LRK53_RS08925	0.54	+0.1
1,999,042	-		LRK53_RS08925	0.54	-1.4
1,999,042	-		LRK53_RS08925	0.54	-0.5
1,999,042	-		LRK53_RS08925	0.54	-2.5
1,999,042	-		LRK53_RS08925	0.54	-1.3
1,999,042	-		LRK53_RS08925	0.54	-1.5
1,999,042	-		LRK53_RS08925	0.54	-3.2
1,999,042	-		LRK53_RS08925	0.54	-0.3
1,999,160	+		LRK53_RS08925	0.66	-2.9
1,999,565	+				-1.0
1,999,566	-				-0.7
1,999,566	-				+0.6
1,999,566	-				+0.1
1,999,568	+				-1.3
1,999,568	+				-0.2
1,999,568	+				-0.4
1,999,568	+				-1.0
1,999,568	+				-0.8
1,999,569	-				+0.4
1,999,569	-				-0.4
1,999,569	-				-1.5
1,999,662	+				-0.9
1,999,662	+				-1.5
1,999,662	+				-0.5
1,999,662	+				-0.9
1,999,662	+				+1.3
1,999,662	+				-1.8
1,999,663	-				-1.8
1,999,663	-				+0.9
1,999,663	-				-0.1
1,999,663	-				+1.0
1,999,663	-				-1.2
1,999,663	-				-0.7
1,999,686	+				-0.0
1,999,687	-				-1.0
1,999,687	-				+0.6
1,999,687	-				+2.5
1,999,687	-				-1.8
1,999,798	+		LRK53_RS08930	0.18	-0.2
1,999,798	+		LRK53_RS08930	0.18	-0.0
1,999,798	+		LRK53_RS08930	0.18	+0.8
1,999,798	+		LRK53_RS08930	0.18	-0.5
1,999,798	+		LRK53_RS08930	0.18	-2.0
1,999,798	+		LRK53_RS08930	0.18	+1.5
1,999,798	+		LRK53_RS08930	0.18	-0.3
1,999,798	+		LRK53_RS08930	0.18	+0.7
1,999,799	-		LRK53_RS08930	0.18	-0.5
1,999,799	-		LRK53_RS08930	0.18	-0.2
1,999,807	+		LRK53_RS08930	0.20	-0.3
1,999,807	+		LRK53_RS08930	0.20	+0.2
1,999,807	+		LRK53_RS08930	0.20	-1.3
1,999,807	+		LRK53_RS08930	0.20	+0.9
1,999,807	+		LRK53_RS08930	0.20	-0.8
1,999,807	+		LRK53_RS08930	0.20	-0.1
1,999,807	+		LRK53_RS08930	0.20	-0.2
1,999,807	+		LRK53_RS08930	0.20	-0.8
1,999,807	+		LRK53_RS08930	0.20	+1.3
1,999,807	+		LRK53_RS08930	0.20	+0.4
1,999,807	+		LRK53_RS08930	0.20	-0.1
1,999,807	+		LRK53_RS08930	0.20	-0.7
1,999,807	+		LRK53_RS08930	0.20	-1.0
1,999,807	+		LRK53_RS08930	0.20	+1.7
1,999,807	+		LRK53_RS08930	0.20	+0.6
1,999,807	+		LRK53_RS08930	0.20	-0.4
1,999,807	+		LRK53_RS08930	0.20	-2.4
1,999,807	+		LRK53_RS08930	0.20	+0.4
1,999,807	+		LRK53_RS08930	0.20	-0.4
1,999,807	+		LRK53_RS08930	0.20	-0.6
1,999,807	+		LRK53_RS08930	0.20	-0.8
1,999,807	+		LRK53_RS08930	0.20	-1.2
1,999,807	+		LRK53_RS08930	0.20	-2.1
1,999,807	+		LRK53_RS08930	0.20	-1.3
1,999,807	+		LRK53_RS08930	0.20	-0.8
1,999,807	+		LRK53_RS08930	0.20	-1.0
1,999,807	+		LRK53_RS08930	0.20	+0.2
1,999,807	+		LRK53_RS08930	0.20	+0.1
1,999,807	+		LRK53_RS08930	0.20	+1.7
1,999,807	+		LRK53_RS08930	0.20	-0.1
1,999,807	+		LRK53_RS08930	0.20	+1.1
1,999,807	+		LRK53_RS08930	0.20	-2.1
1,999,807	+		LRK53_RS08930	0.20	+0.5
1,999,807	+		LRK53_RS08930	0.20	-1.7
1,999,807	+		LRK53_RS08930	0.20	-1.0
1,999,807	+		LRK53_RS08930	0.20	+0.5
1,999,808	-		LRK53_RS08930	0.21	+0.2
1,999,808	-		LRK53_RS08930	0.21	-0.7
1,999,808	-		LRK53_RS08930	0.21	-1.0
1,999,808	-		LRK53_RS08930	0.21	-0.0
1,999,808	-		LRK53_RS08930	0.21	-1.4
1,999,808	-		LRK53_RS08930	0.21	-2.0
1,999,808	-		LRK53_RS08930	0.21	-0.4
1,999,808	-		LRK53_RS08930	0.21	-0.0
1,999,808	-		LRK53_RS08930	0.21	-0.8
1,999,808	-		LRK53_RS08930	0.21	-0.8
1,999,808	-		LRK53_RS08930	0.21	-0.6
1,999,808	-		LRK53_RS08930	0.21	-1.0
1,999,808	-		LRK53_RS08930	0.21	+0.5
1,999,808	-		LRK53_RS08930	0.21	+0.9
1,999,808	-		LRK53_RS08930	0.21	-0.0
1,999,808	-		LRK53_RS08930	0.21	-0.4
1,999,808	-		LRK53_RS08930	0.21	+0.9
1,999,808	-		LRK53_RS08930	0.21	+0.5
1,999,808	-		LRK53_RS08930	0.21	+0.5
1,999,808	-		LRK53_RS08930	0.21	+1.7
1,999,808	-		LRK53_RS08930	0.21	-1.5
1,999,808	-		LRK53_RS08930	0.21	-0.1
1,999,808	-		LRK53_RS08930	0.21	+1.3
1,999,808	-		LRK53_RS08930	0.21	+0.1
1,999,808	-		LRK53_RS08930	0.21	-0.7
1,999,808	-		LRK53_RS08930	0.21	-0.9
1,999,858	+		LRK53_RS08930	0.35	+0.2
1,999,859	-		LRK53_RS08930	0.35	-0.3
1,999,859	-		LRK53_RS08930	0.35	-1.3
1,999,859	-		LRK53_RS08930	0.35	-0.3
2,000,111	+				-0.2
2,000,111	+				-0.7
2,000,112	-				-0.7
2,000,112	-				-0.6
2,000,112	-				-1.0
2,000,126	+				-1.7
2,000,126	+				-0.1
2,000,126	+				+0.3
2,000,126	+				-2.4
2,000,127	-				+1.5
2,000,127	-				-3.1
2,000,127	-				-0.2
2,000,127	-				-0.2
2,000,127	-				-0.1
2,000,127	-				-1.1
2,000,127	-				-1.4
2,000,127	-				-1.3
2,000,133	+				-1.2
2,000,133	+				-1.9
2,000,134	-				-1.4
2,000,134	-				-1.7
2,000,134	-				-1.0
2,000,134	-				+0.7
2,000,134	-				-1.3
2,000,134	-				-2.1
2,000,134	-				-2.1
2,000,176	+				-1.1
2,000,176	+				-0.2
2,000,176	+				-1.5
2,000,176	+				+0.2
2,000,176	+				-0.5
2,000,176	+				-0.2
2,000,176	+				-1.6
2,000,176	+				-0.4
2,000,176	+				-0.0
2,000,176	+				-1.1
2,000,176	+				-0.5
2,000,176	+				-1.0
2,000,176	+				-1.3
2,000,176	+				-0.2
2,000,176	+				-2.0
2,000,176	+				-0.2
2,000,176	+				-2.4
2,000,176	+				-0.4
2,000,176	+				-0.2
2,000,176	+				-0.5
2,000,176	+				-1.1
2,000,176	+				-3.2
2,000,176	+				-0.5
2,000,176	+				-1.5
2,000,176	+				-0.6
2,000,176	+				-2.5
2,000,176	+				-0.4
2,000,176	+				-0.4
2,000,177	-				-0.4
2,000,355	+				+1.2
2,000,355	+				-0.5
2,000,355	+				-1.7
2,000,355	+				-1.0
2,000,355	+				-0.2
2,000,355	+				-1.1
2,000,355	+				-1.2
2,000,355	+				-0.0
2,000,355	+				-0.0
2,000,355	+				-1.0
2,000,355	+				-0.5
2,000,355	+				-0.9
2,000,355	+				+0.6
2,000,355	+				-1.6