Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS06060

Experiment: biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM
1,391,826	+		LRK53_RS06050	0.89	-0.7
1,391,827	-		LRK53_RS06050	0.90	-1.0
1,391,888	+				-2.2
1,391,888	+				-0.4
1,391,888	+				+0.6
1,391,888	+				-0.4
1,391,888	+				-3.2
1,391,888	+				+0.0
1,391,888	+				-0.5
1,391,888	+				+0.6
1,391,888	+				+0.1
1,391,888	+				-0.5
1,391,888	+				+2.6
1,391,888	+				-1.2
1,391,888	+				+0.7
1,391,888	+				-1.0
1,391,888	+				-0.3
1,391,889	-				+1.3
1,391,889	-				-2.5
1,391,889	-				-0.4
1,391,889	-				-0.9
1,391,889	-				-2.5
1,391,889	-				+0.0
1,391,889	-				-0.2
1,391,889	-				-0.6
1,391,889	-				-1.2
1,391,889	-				-0.8
1,391,889	-				-1.2
1,391,889	-				-0.9
1,391,889	-				+0.5
1,391,889	-				-2.5
1,391,889	-				-1.1
1,391,889	-				-0.4
1,391,889	-				-1.1
1,391,889	-				+0.8
1,391,889	-				+0.8
1,391,889	-				-0.7
1,391,890	+				+0.7
1,391,890	+				+0.8
1,391,890	+				-1.7
1,391,890	+				+1.0
1,391,890	+				-1.9
1,391,890	+				-0.3
1,391,890	+				+0.7
1,391,890	+				-0.8
1,391,890	+				-0.6
1,391,890	+				-0.4
1,391,890	+				-0.3
1,391,890	+				-1.3
1,391,890	+				-0.6
1,391,891	-				+0.2
1,391,891	-				+0.7
1,391,891	-				+0.7
1,391,891	-				+0.2
1,391,891	-				-0.7
1,391,891	-				+1.4
1,391,891	-				-1.6
1,392,168	+				+1.2
1,392,746	+				-0.6
1,392,746	+				-0.2
1,392,798	+				-1.1
1,392,798	+				-1.2
1,392,799	-				-1.0
1,392,799	-				-1.9
1,392,842	+				-1.0
1,392,842	+				-0.5
1,392,842	+				-0.5
1,392,842	+				-1.5
1,392,842	+				-1.2
1,392,842	+				-1.0
1,392,842	+				+1.1
1,392,842	+				-2.6
1,392,842	+				-0.2
1,392,843	-				+1.4
1,392,843	-				-1.6
1,392,843	-				-0.7
1,392,843	-				-1.7
1,392,843	-				-0.3
1,392,843	-				+0.1
1,392,843	-				-0.9
1,392,884	+		LRK53_RS06060	0.13	-0.4
1,392,884	+		LRK53_RS06060	0.13	+0.4
1,392,885	-		LRK53_RS06060	0.13	+0.0
1,392,974	-		LRK53_RS06060	0.23	-1.3
1,393,032	+		LRK53_RS06060	0.30	-1.0
1,393,032	+		LRK53_RS06060	0.30	-0.4
1,393,032	+		LRK53_RS06060	0.30	+0.3
1,393,032	+		LRK53_RS06060	0.30	+0.1
1,393,033	-		LRK53_RS06060	0.30	-2.1
1,393,125	-		LRK53_RS06060	0.41	+0.4
1,393,146	+		LRK53_RS06060	0.43	-1.2
1,393,146	+		LRK53_RS06060	0.43	-0.3
1,393,146	+		LRK53_RS06060	0.43	+0.3
1,393,146	+		LRK53_RS06060	0.43	-0.3
1,393,146	+		LRK53_RS06060	0.43	-1.0
1,393,146	+		LRK53_RS06060	0.43	+1.7
1,393,146	+		LRK53_RS06060	0.43	-0.6
1,393,147	-		LRK53_RS06060	0.43	-0.6
1,393,147	-		LRK53_RS06060	0.43	-0.7
1,393,147	-		LRK53_RS06060	0.43	-0.6
1,393,147	-		LRK53_RS06060	0.43	-2.3
1,393,235	+		LRK53_RS06060	0.53	-0.3
1,393,235	+		LRK53_RS06060	0.53	+2.0
1,393,235	+		LRK53_RS06060	0.53	-2.0
1,393,235	+		LRK53_RS06060	0.53	-0.5
1,393,235	+		LRK53_RS06060	0.53	+0.2
1,393,235	+		LRK53_RS06060	0.53	-0.7
1,393,235	+		LRK53_RS06060	0.53	-1.2
1,393,236	-		LRK53_RS06060	0.54	-0.8
1,393,236	-		LRK53_RS06060	0.54	-1.1
1,393,236	-		LRK53_RS06060	0.54	-1.2
1,393,236	-		LRK53_RS06060	0.54	+0.2
1,393,236	-		LRK53_RS06060	0.54	-1.6
1,393,236	-		LRK53_RS06060	0.54	+0.3
1,393,236	-		LRK53_RS06060	0.54	-0.8
1,393,236	-		LRK53_RS06060	0.54	-1.8
1,393,281	-		LRK53_RS06060	0.59	-1.1
1,393,289	+		LRK53_RS06060	0.60	+0.6
1,393,289	+		LRK53_RS06060	0.60	+2.7
1,393,289	+		LRK53_RS06060	0.60	-0.7
1,393,290	-		LRK53_RS06060	0.60	-0.3
1,393,290	-		LRK53_RS06060	0.60	+0.6
1,393,290	-		LRK53_RS06060	0.60	-1.3
1,393,358	+		LRK53_RS06060	0.68	+0.5
1,393,358	+		LRK53_RS06060	0.68	-1.0
1,393,358	+		LRK53_RS06060	0.68	-0.2
1,393,359	-		LRK53_RS06060	0.68	+0.5
1,393,359	-		LRK53_RS06060	0.68	-0.6
1,393,359	-		LRK53_RS06060	0.68	-0.5
1,393,359	-		LRK53_RS06060	0.68	-0.5
1,393,359	-		LRK53_RS06060	0.68	+0.3
1,393,359	-		LRK53_RS06060	0.68	-1.2
1,393,400	-		LRK53_RS06060	0.73	-0.2
1,393,400	-		LRK53_RS06060	0.73	-0.2
1,393,400	-		LRK53_RS06060	0.73	+1.0
1,393,400	-		LRK53_RS06060	0.73	-1.3
1,393,400	-		LRK53_RS06060	0.73	-2.4
1,393,400	-		LRK53_RS06060	0.73	+0.3
1,393,609	-				-1.0
1,393,650	+				-1.2
1,393,651	-				-0.6
1,393,651	-				-0.6
1,393,651	-				-0.2
1,393,651	-				-0.6
1,393,651	-				+0.9
1,393,651	-				-1.1
1,393,762	+				-0.5
1,393,762	+				-0.1
1,393,763	-				-2.1
1,393,763	-				+1.4
1,393,763	-				-0.9
1,393,763	-				-1.2
1,393,799	+				-1.0
1,394,036	+				-0.2
1,394,036	+				-0.6
1,394,037	-				-1.7
1,394,066	+		LRK53_RS06065	0.11	-1.1
1,394,066	+		LRK53_RS06065	0.11	+0.6
1,394,066	+		LRK53_RS06065	0.11	+0.8
1,394,066	+		LRK53_RS06065	0.11	-0.4
1,394,066	+		LRK53_RS06065	0.11	-1.1
1,394,066	+		LRK53_RS06065	0.11	-0.4
1,394,066	+		LRK53_RS06065	0.11	-1.9
1,394,066	+		LRK53_RS06065	0.11	-1.2
1,394,066	+		LRK53_RS06065	0.11	-1.4
1,394,066	+		LRK53_RS06065	0.11	-0.4
1,394,067	-		LRK53_RS06065	0.11	-0.3
1,394,067	-		LRK53_RS06065	0.11	-0.9
1,394,067	-		LRK53_RS06065	0.11	-1.3
1,394,067	-		LRK53_RS06065	0.11	+0.5
1,394,156	+		LRK53_RS06065	0.15	-2.6
1,394,156	+		LRK53_RS06065	0.15	-0.9
1,394,156	+		LRK53_RS06065	0.15	-1.4
1,394,156	+		LRK53_RS06065	0.15	-1.4
1,394,157	-		LRK53_RS06065	0.15	-0.8
1,394,157	-		LRK53_RS06065	0.15	-1.7
1,394,157	-		LRK53_RS06065	0.15	-0.5
1,394,157	-		LRK53_RS06065	0.15	-0.6
1,394,157	-		LRK53_RS06065	0.15	+0.7
1,394,285	+		LRK53_RS06065	0.21	-0.2
1,394,286	-		LRK53_RS06065	0.21	-0.5
1,394,286	-		LRK53_RS06065	0.21	-1.2
1,394,324	+		LRK53_RS06065	0.23	+0.5
1,394,324	+		LRK53_RS06065	0.23	+1.1
1,394,324	+		LRK53_RS06065	0.23	+0.5
1,394,324	+		LRK53_RS06065	0.23	-0.5
1,394,324	+		LRK53_RS06065	0.23	-0.9
1,394,324	+		LRK53_RS06065	0.23	-0.9
1,394,324	+		LRK53_RS06065	0.23	-0.3
1,394,324	+		LRK53_RS06065	0.23	+0.0
1,394,324	+		LRK53_RS06065	0.23	-1.3
1,394,325	-		LRK53_RS06065	0.23	+0.4
1,394,325	-		LRK53_RS06065	0.23	+0.3
1,394,325	-		LRK53_RS06065	0.23	-0.9
1,394,325	-		LRK53_RS06065	0.23	-0.9
1,394,325	-		LRK53_RS06065	0.23	-0.0
1,394,325	-		LRK53_RS06065	0.23	-1.1
1,394,325	-		LRK53_RS06065	0.23	-0.9
1,394,325	-		LRK53_RS06065	0.23	+0.5
1,394,325	-		LRK53_RS06065	0.23	-0.8
1,394,325	-		LRK53_RS06065	0.23	+0.0
1,394,325	-		LRK53_RS06065	0.23	-1.9
1,394,325	-		LRK53_RS06065	0.23	-1.7
1,394,325	-		LRK53_RS06065	0.23	+2.1
1,394,325	-		LRK53_RS06065	0.23	-1.1
1,394,411	+		LRK53_RS06065	0.27	-0.5
1,394,411	+		LRK53_RS06065	0.27	-2.6
1,394,411	+		LRK53_RS06065	0.27	-1.3
1,394,411	+		LRK53_RS06065	0.27	-0.5
1,394,411	+		LRK53_RS06065	0.27	-0.6
1,394,412	-		LRK53_RS06065	0.27	+0.2
1,394,412	-		LRK53_RS06065	0.27	-2.0
1,394,412	-		LRK53_RS06065	0.27	-0.8
1,394,440	+		LRK53_RS06065	0.28	-1.0
1,394,440	+		LRK53_RS06065	0.28	+1.4
1,394,440	+		LRK53_RS06065	0.28	+0.3
1,394,440	+		LRK53_RS06065	0.28	-1.4
1,394,440	+		LRK53_RS06065	0.28	+1.2
1,394,441	-		LRK53_RS06065	0.28	-1.7
1,394,609	+		LRK53_RS06065	0.36	-0.2
1,394,609	+		LRK53_RS06065	0.36	-1.3
1,394,610	-		LRK53_RS06065	0.36	-1.1
1,394,610	-		LRK53_RS06065	0.36	-0.7
1,394,610	-		LRK53_RS06065	0.36	-0.5
1,394,610	-		LRK53_RS06065	0.36	-0.8
1,394,610	-		LRK53_RS06065	0.36	+0.0
1,394,610	-		LRK53_RS06065	0.36	+0.2