Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS00355

Experiment: biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM
80,621	+				+0.6
80,621	+				-1.0
80,621	+				+0.4
80,622	-				-0.2
80,676	+				-0.5
80,676	+				-1.1
80,676	+				-0.3
80,677	-				+0.0
80,701	+				-0.5
80,701	+				-0.4
80,701	+				+0.5
80,701	+				-1.3
80,702	-				-0.2
80,763	+				-0.9
80,763	+				-0.9
80,763	+				-0.3
80,764	-				+0.3
80,764	-				-0.7
80,764	-				+4.1
81,101	+		LRK53_RS00350	0.12	-1.3
81,101	+		LRK53_RS00350	0.12	-0.3
81,101	+		LRK53_RS00350	0.12	+2.4
81,101	+		LRK53_RS00350	0.12	+0.3
81,101	+		LRK53_RS00350	0.12	-0.6
81,102	-		LRK53_RS00350	0.13	+0.5
81,119	+		LRK53_RS00350	0.17	+0.3
81,119	+		LRK53_RS00350	0.17	+0.5
81,119	+		LRK53_RS00350	0.17	-0.3
81,120	-		LRK53_RS00350	0.18	-0.9
81,120	-		LRK53_RS00350	0.18	+1.1
81,120	-		LRK53_RS00350	0.18	+0.4
81,120	-		LRK53_RS00350	0.18	-1.2
81,120	-		LRK53_RS00350	0.18	-1.1
81,255	+		LRK53_RS00350	0.55	-0.2
81,255	+		LRK53_RS00350	0.55	+1.3
81,256	-		LRK53_RS00350	0.56	-0.0
81,256	-		LRK53_RS00350	0.56	+0.1
81,277	+		LRK53_RS00350	0.61	-0.9
81,277	+		LRK53_RS00350	0.61	-0.0
81,278	-		LRK53_RS00350	0.62	+0.2
81,278	-		LRK53_RS00350	0.62	-0.1
81,278	-		LRK53_RS00350	0.62	-0.1
81,278	-		LRK53_RS00350	0.62	-0.3
81,656	-		LRK53_RS00355	0.20	+0.4
81,656	-		LRK53_RS00355	0.20	-0.3
81,769	+		LRK53_RS00355	0.33	+0.2
81,770	-		LRK53_RS00355	0.33	-1.5
81,836	+		LRK53_RS00355	0.40	-0.5
81,836	+		LRK53_RS00355	0.40	-0.7
81,836	+		LRK53_RS00355	0.40	+0.3
81,836	+		LRK53_RS00355	0.40	-0.7
81,836	+		LRK53_RS00355	0.40	-2.1
81,836	+		LRK53_RS00355	0.40	+0.7
81,837	-		LRK53_RS00355	0.40	-0.9
81,837	-		LRK53_RS00355	0.40	-1.0
81,837	-		LRK53_RS00355	0.40	-0.2
81,837	-		LRK53_RS00355	0.40	+1.2
81,837	-		LRK53_RS00355	0.40	-0.2
81,837	-		LRK53_RS00355	0.40	-2.0
81,837	-		LRK53_RS00355	0.40	-2.4
81,837	-		LRK53_RS00355	0.40	-0.2
81,837	-		LRK53_RS00355	0.40	-0.2
81,837	-		LRK53_RS00355	0.40	+0.5
81,837	-		LRK53_RS00355	0.40	-2.2
81,837	-		LRK53_RS00355	0.40	-1.1
81,935	+		LRK53_RS00355	0.51	-0.9
81,935	+		LRK53_RS00355	0.51	-0.6
81,935	+		LRK53_RS00355	0.51	+1.1
81,936	-		LRK53_RS00355	0.51	-3.2
81,936	-		LRK53_RS00355	0.51	-0.3
81,936	-		LRK53_RS00355	0.51	+0.1
81,936	-		LRK53_RS00355	0.51	-2.3
81,936	-		LRK53_RS00355	0.51	-0.8
81,936	-		LRK53_RS00355	0.51	-1.9
81,936	-		LRK53_RS00355	0.51	-1.7
81,936	-		LRK53_RS00355	0.51	-0.9
81,938	+		LRK53_RS00355	0.51	+0.1
82,028	+		LRK53_RS00355	0.61	-1.0
82,028	+		LRK53_RS00355	0.61	-0.1
82,028	+		LRK53_RS00355	0.61	-0.5
82,028	+		LRK53_RS00355	0.61	+0.1
82,028	+		LRK53_RS00355	0.61	-2.4
82,028	+		LRK53_RS00355	0.61	-0.1
82,028	+		LRK53_RS00355	0.61	-1.2
82,028	+		LRK53_RS00355	0.61	-2.0
82,028	+		LRK53_RS00355	0.61	-0.1
82,028	+		LRK53_RS00355	0.61	+0.3
82,029	-		LRK53_RS00355	0.61	-0.7
82,029	-		LRK53_RS00355	0.61	-0.5
82,029	-		LRK53_RS00355	0.61	+2.1
82,029	-		LRK53_RS00355	0.61	-0.5
82,029	-		LRK53_RS00355	0.61	+1.9
82,029	-		LRK53_RS00355	0.61	-0.1
82,029	-		LRK53_RS00355	0.61	-2.3
82,029	-		LRK53_RS00355	0.61	-1.3
82,029	-		LRK53_RS00355	0.61	+0.1
82,029	-		LRK53_RS00355	0.61	-0.5
82,029	-		LRK53_RS00355	0.61	-0.7
82,029	-		LRK53_RS00355	0.61	-0.4
82,085	+		LRK53_RS00355	0.68	-1.9
82,085	+		LRK53_RS00355	0.68	-1.6
82,086	-		LRK53_RS00355	0.68	+1.8
82,086	-		LRK53_RS00355	0.68	+0.2
82,086	-		LRK53_RS00355	0.68	-0.8
82,086	-		LRK53_RS00355	0.68	-0.7
82,145	+		LRK53_RS00355	0.74	+0.1
82,145	+		LRK53_RS00355	0.74	-1.3
82,145	+		LRK53_RS00355	0.74	+0.8
82,145	+		LRK53_RS00355	0.74	-0.7
82,145	+		LRK53_RS00355	0.74	-2.4
82,145	+		LRK53_RS00355	0.74	-0.2
82,145	+		LRK53_RS00355	0.74	+0.5
82,145	+		LRK53_RS00355	0.74	-2.7
82,146	-		LRK53_RS00355	0.74	-0.3
82,146	-		LRK53_RS00355	0.74	-0.5
82,146	-		LRK53_RS00355	0.74	-0.6
82,146	-		LRK53_RS00355	0.74	-0.3
82,146	-		LRK53_RS00355	0.74	-2.8
82,146	-		LRK53_RS00355	0.74	+0.7
82,343	+				-2.1
82,344	-				-2.5
82,344	-				-0.4
82,344	-				-1.6
82,344	-				+0.4
82,344	-				-0.6
82,344	-				-3.0
82,344	-				-1.1
82,366	+				-0.3
82,492	+				+1.9
82,493	-				+0.1
82,515	+		LRK53_RS00360	0.11	-3.6
82,515	+		LRK53_RS00360	0.11	-0.1
82,515	+		LRK53_RS00360	0.11	-0.7
82,515	+		LRK53_RS00360	0.11	-0.6
82,515	+		LRK53_RS00360	0.11	-0.1
82,515	+		LRK53_RS00360	0.11	-1.1
82,515	+		LRK53_RS00360	0.11	+0.3
82,515	+		LRK53_RS00360	0.11	-1.4
82,515	+		LRK53_RS00360	0.11	-0.9
82,515	+		LRK53_RS00360	0.11	-0.7
82,516	-		LRK53_RS00360	0.11	-1.1
82,516	-		LRK53_RS00360	0.11	-0.8
82,516	-		LRK53_RS00360	0.11	-2.3
82,516	-		LRK53_RS00360	0.11	-0.5
82,516	-		LRK53_RS00360	0.11	-0.6
82,593	+		LRK53_RS00360	0.24	-0.1
82,593	+		LRK53_RS00360	0.24	+0.3
82,593	+		LRK53_RS00360	0.24	-2.5
82,593	+		LRK53_RS00360	0.24	+0.1
82,593	+		LRK53_RS00360	0.24	-2.3
82,593	+		LRK53_RS00360	0.24	-2.2
82,593	+		LRK53_RS00360	0.24	-0.9
82,593	+		LRK53_RS00360	0.24	+0.3
82,593	+		LRK53_RS00360	0.24	+2.5
82,593	+		LRK53_RS00360	0.24	+0.0
82,593	+		LRK53_RS00360	0.24	-0.2
82,593	+		LRK53_RS00360	0.24	+1.1
82,593	+		LRK53_RS00360	0.24	-0.8
82,593	+		LRK53_RS00360	0.24	-1.2
82,593	+		LRK53_RS00360	0.24	-1.4
82,593	+		LRK53_RS00360	0.24	+0.5
82,593	+		LRK53_RS00360	0.24	-0.8
82,593	+		LRK53_RS00360	0.24	-0.6
82,593	+		LRK53_RS00360	0.24	-0.1
82,594	-		LRK53_RS00360	0.24	-1.2
82,594	-		LRK53_RS00360	0.24	-1.6
82,594	-		LRK53_RS00360	0.24	-2.1
82,594	-		LRK53_RS00360	0.24	-0.9
82,594	-		LRK53_RS00360	0.24	+1.1
82,594	-		LRK53_RS00360	0.24	-0.5
82,594	-		LRK53_RS00360	0.24	-0.1
82,594	-		LRK53_RS00360	0.24	+0.2
82,594	-		LRK53_RS00360	0.24	-0.6
82,594	-		LRK53_RS00360	0.24	-0.3
82,594	-		LRK53_RS00360	0.24	-1.9
82,594	-		LRK53_RS00360	0.24	-0.2
82,594	-		LRK53_RS00360	0.24	+0.4
82,594	-		LRK53_RS00360	0.24	-0.6
82,594	-		LRK53_RS00360	0.24	-2.3
82,594	-		LRK53_RS00360	0.24	+0.6
82,594	-		LRK53_RS00360	0.24	-0.7
82,594	-		LRK53_RS00360	0.24	-1.0
82,594	-		LRK53_RS00360	0.24	-0.3
82,594	-		LRK53_RS00360	0.24	-3.1
82,594	-		LRK53_RS00360	0.24	+1.2
82,594	-		LRK53_RS00360	0.24	-0.6
82,594	-		LRK53_RS00360	0.24	-0.5
82,594	-		LRK53_RS00360	0.24	-0.9
82,594	-		LRK53_RS00360	0.24	-0.8
82,594	-		LRK53_RS00360	0.24	+0.4
82,594	-		LRK53_RS00360	0.24	-2.3
82,594	-		LRK53_RS00360	0.24	+0.5
82,594	-		LRK53_RS00360	0.24	-0.9
82,791	+		LRK53_RS00360	0.59	-3.2
82,791	+		LRK53_RS00360	0.59	-1.0
82,791	+		LRK53_RS00360	0.59	-2.1
82,791	+		LRK53_RS00360	0.59	+0.1
82,791	+		LRK53_RS00360	0.59	-1.5
82,791	+		LRK53_RS00360	0.59	-0.4
82,792	-		LRK53_RS00360	0.59	+1.7
82,792	-		LRK53_RS00360	0.59	-0.8
82,792	-		LRK53_RS00360	0.59	-0.1
82,792	-		LRK53_RS00360	0.59	+2.1
82,792	-		LRK53_RS00360	0.59	+0.3
82,875	+		LRK53_RS00360	0.73	-1.4
82,875	+		LRK53_RS00360	0.73	-0.3
82,875	+		LRK53_RS00360	0.73	+0.1
82,881	+		LRK53_RS00360	0.75	-0.7
82,881	+		LRK53_RS00360	0.75	+0.6
82,881	+		LRK53_RS00360	0.75	-0.6
82,881	+		LRK53_RS00360	0.75	-0.6
82,881	+		LRK53_RS00360	0.75	+0.5
82,881	+		LRK53_RS00360	0.75	+2.5
82,881	+		LRK53_RS00360	0.75	-1.7
82,881	+		LRK53_RS00360	0.75	+0.5
82,882	-		LRK53_RS00360	0.75	+0.9
82,882	-		LRK53_RS00360	0.75	-3.7
82,882	-		LRK53_RS00360	0.75	-0.6
82,882	-		LRK53_RS00360	0.75	-2.0
82,882	-		LRK53_RS00360	0.75	+0.2
82,882	-		LRK53_RS00360	0.75	+2.7
82,887	+		LRK53_RS00360	0.76	+0.8
82,887	+		LRK53_RS00360	0.76	+0.8
82,887	+		LRK53_RS00360	0.76	-0.7
82,887	+		LRK53_RS00360	0.76	-0.5
82,888	-		LRK53_RS00360	0.76	+0.5
82,888	-		LRK53_RS00360	0.76	+3.1
82,888	-		LRK53_RS00360	0.76	+1.4
82,888	-		LRK53_RS00360	0.76	-0.8
82,888	-		LRK53_RS00360	0.76	+0.0
82,888	-		LRK53_RS00360	0.76	-1.2
83,004	+				-0.2
83,004	+				-0.1
83,004	+				-1.7
83,004	+				-0.2
83,004	+				-1.1
83,005	-				-0.1
83,005	-				+0.6
83,020	+				-0.2
83,020	+				-0.6
83,020	+				-0.3
83,020	+				+0.0
83,021	-				-3.1
83,021	-				+1.6
83,021	-				-0.5
83,021	-				-1.7
83,021	-				-0.2
83,021	-				-0.5
83,021	-				-0.8
83,021	-				-0.8
83,021	-				+1.1
83,021	-				-0.8
83,021	-				-1.7
83,021	-				-3.1
83,021	-				+0.0
83,021	-				+0.7
83,021	-				+0.4
83,021	-				+0.7
83,021	-				-0.9
83,021	-				-0.2
83,128	+				+0.3
83,142	+				-1.7