Experiment: LB_noSalt with Chloride 200 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS41025 and QEN71_RS41030 are separated by 347 nucleotides QEN71_RS41030 and QEN71_RS41035 are separated by 856 nucleotides
QEN71_RS41025: QEN71_RS41025 - IS66 family transposase, at 270,172 to 271,737
_RS41025
QEN71_RS41030: QEN71_RS41030 - XRE family transcriptional regulator, at 272,085 to 272,408
_RS41030
QEN71_RS41035: QEN71_RS41035 - hypothetical protein, at 273,265 to 273,573
_RS41035
Position (kb) 272
273 Strain fitness (log2 ratio) -2
-1
0
1
2 at 271.152 kb on + strand, within QEN71_RS41025 at 271.271 kb on - strand, within QEN71_RS41025 at 271.271 kb on - strand, within QEN71_RS41025 at 271.798 kb on - strand at 271.812 kb on + strand at 271.813 kb on - strand at 272.021 kb on + strand at 272.021 kb on + strand at 272.022 kb on - strand at 272.022 kb on - strand at 272.041 kb on + strand at 272.075 kb on + strand at 272.076 kb on - strand at 272.076 kb on - strand at 272.076 kb on - strand at 272.086 kb on + strand at 272.086 kb on + strand at 272.086 kb on + strand at 272.086 kb on + strand at 272.086 kb on + strand at 272.087 kb on - strand at 272.087 kb on - strand at 272.087 kb on - strand at 272.094 kb on - strand at 272.094 kb on - strand at 272.094 kb on - strand at 272.148 kb on - strand, within QEN71_RS41030 at 272.203 kb on + strand, within QEN71_RS41030 at 272.204 kb on - strand, within QEN71_RS41030 at 272.304 kb on - strand, within QEN71_RS41030 at 272.304 kb on - strand, within QEN71_RS41030 at 272.304 kb on - strand, within QEN71_RS41030 at 272.304 kb on - strand, within QEN71_RS41030 at 272.304 kb on - strand, within QEN71_RS41030 at 272.365 kb on - strand, within QEN71_RS41030 at 272.388 kb on + strand at 272.389 kb on - strand at 272.389 kb on - strand at 272.389 kb on - strand at 272.389 kb on - strand at 272.389 kb on - strand at 272.389 kb on - strand at 272.389 kb on - strand at 272.394 kb on + strand at 272.395 kb on - strand at 272.395 kb on - strand at 272.395 kb on - strand at 272.395 kb on - strand at 272.395 kb on - strand at 272.395 kb on - strand at 272.395 kb on - strand at 272.395 kb on - strand at 272.395 kb on - strand at 272.395 kb on - strand at 272.395 kb on - strand at 272.395 kb on - strand at 272.413 kb on - strand at 272.413 kb on - strand at 272.454 kb on + strand at 272.454 kb on + strand at 272.455 kb on - strand at 272.455 kb on - strand at 272.455 kb on - strand at 272.566 kb on + strand at 272.566 kb on + strand at 272.566 kb on + strand at 272.566 kb on + strand at 272.566 kb on + strand at 272.567 kb on - strand at 272.567 kb on - strand at 272.611 kb on + strand at 272.612 kb on - strand at 272.637 kb on + strand at 272.638 kb on - strand at 272.638 kb on - strand at 272.664 kb on + strand at 272.664 kb on + strand at 272.698 kb on + strand at 272.698 kb on + strand at 272.698 kb on + strand at 272.698 kb on + strand at 272.698 kb on + strand at 272.698 kb on + strand at 272.698 kb on + strand at 272.698 kb on + strand at 272.698 kb on + strand at 272.698 kb on + strand at 272.698 kb on + strand at 272.698 kb on + strand at 272.698 kb on + strand at 272.698 kb on + strand at 272.699 kb on - strand at 272.699 kb on - strand at 272.699 kb on - strand at 272.739 kb on - strand at 272.878 kb on + strand at 272.981 kb on + strand at 272.981 kb on + strand at 272.981 kb on + strand at 273.030 kb on + strand at 273.031 kb on - strand at 273.080 kb on + strand at 273.080 kb on + strand at 273.080 kb on + strand at 273.080 kb on + strand at 273.080 kb on + strand at 273.081 kb on - strand at 273.081 kb on - strand at 273.081 kb on - strand at 273.081 kb on - strand at 273.081 kb on - strand at 273.082 kb on + strand at 273.082 kb on + strand at 273.082 kb on + strand at 273.082 kb on + strand at 273.082 kb on + strand at 273.082 kb on + strand at 273.082 kb on + strand at 273.082 kb on + strand at 273.082 kb on + strand at 273.082 kb on + strand at 273.082 kb on + strand at 273.082 kb on + strand at 273.082 kb on + strand at 273.082 kb on + strand at 273.082 kb on + strand at 273.083 kb on - strand at 273.083 kb on - strand at 273.083 kb on - strand at 273.083 kb on - strand at 273.083 kb on - strand at 273.083 kb on - strand at 273.083 kb on - strand at 273.083 kb on - strand at 273.083 kb on - strand at 273.083 kb on - strand at 273.083 kb on - strand at 273.083 kb on - strand at 273.083 kb on - strand at 273.083 kb on - strand at 273.083 kb on - strand at 273.083 kb on - strand at 273.152 kb on + strand at 273.152 kb on + strand at 273.152 kb on + strand at 273.152 kb on + strand at 273.152 kb on + strand at 273.152 kb on + strand at 273.152 kb on + strand at 273.152 kb on + strand at 273.152 kb on + strand at 273.152 kb on + strand at 273.152 kb on + strand at 273.152 kb on + strand at 273.152 kb on + strand at 273.153 kb on - strand at 273.153 kb on - strand at 273.153 kb on - strand at 273.153 kb on - strand at 273.153 kb on - strand at 273.153 kb on - strand at 273.153 kb on - strand at 273.153 kb on - strand at 273.153 kb on - strand at 273.153 kb on - strand at 273.153 kb on - strand at 273.153 kb on - strand at 273.243 kb on + strand at 273.243 kb on + strand at 273.243 kb on + strand at 273.243 kb on + strand at 273.243 kb on + strand at 273.243 kb on + strand at 273.243 kb on + strand at 273.243 kb on + strand at 273.243 kb on + strand at 273.244 kb on - strand at 273.244 kb on - strand at 273.244 kb on - strand at 273.244 kb on - strand at 273.244 kb on - strand at 273.244 kb on - strand at 273.244 kb on - strand at 273.244 kb on - strand at 273.244 kb on - strand at 273.244 kb on - strand at 273.244 kb on - strand at 273.244 kb on - strand at 273.244 kb on - strand at 273.244 kb on - strand at 273.244 kb on - strand at 273.244 kb on - strand at 273.244 kb on - strand at 273.245 kb on + strand at 273.245 kb on + strand at 273.246 kb on - strand at 273.246 kb on - strand at 273.246 kb on - strand at 273.266 kb on + strand at 273.267 kb on - strand at 273.291 kb on + strand at 273.291 kb on + strand at 273.292 kb on - strand at 273.292 kb on - strand at 273.292 kb on - strand at 273.295 kb on + strand at 273.295 kb on + strand at 273.295 kb on + strand at 273.295 kb on + strand at 273.295 kb on + strand at 273.295 kb on + strand at 273.295 kb on + strand at 273.295 kb on + strand at 273.295 kb on + strand at 273.295 kb on + strand at 273.295 kb on + strand at 273.295 kb on + strand at 273.296 kb on - strand, within QEN71_RS41035 at 273.296 kb on - strand, within QEN71_RS41035 at 273.296 kb on - strand, within QEN71_RS41035 at 273.296 kb on - strand, within QEN71_RS41035 at 273.296 kb on - strand, within QEN71_RS41035 at 273.296 kb on - strand, within QEN71_RS41035 at 273.296 kb on - strand, within QEN71_RS41035 at 273.296 kb on - strand, within QEN71_RS41035 at 273.296 kb on - strand, within QEN71_RS41035 at 273.296 kb on - strand, within QEN71_RS41035 at 273.378 kb on + strand, within QEN71_RS41035 at 273.378 kb on + strand, within QEN71_RS41035
Per-strain Table
Position Strand Gene LocusTag Fraction LB_noSalt with Chloride 200 mM remove 271,152 + QEN71_RS41025 0.63 -0.6 271,271 - QEN71_RS41025 0.70 +0.2 271,271 - QEN71_RS41025 0.70 +0.3 271,798 - -0.6 271,812 + +2.0 271,813 - -0.1 272,021 + -0.8 272,021 + +1.7 272,022 - +1.0 272,022 - -0.4 272,041 + -1.7 272,075 + -0.5 272,076 - -0.3 272,076 - +0.3 272,076 - +0.3 272,086 + +0.3 272,086 + +1.1 272,086 + -0.2 272,086 + -0.6 272,086 + -0.8 272,087 - +1.6 272,087 - +1.6 272,087 - -1.9 272,094 - -0.2 272,094 - -0.7 272,094 - +0.8 272,148 - QEN71_RS41030 0.19 -1.1 272,203 + QEN71_RS41030 0.36 -0.0 272,204 - QEN71_RS41030 0.37 +0.4 272,304 - QEN71_RS41030 0.68 -2.0 272,304 - QEN71_RS41030 0.68 -0.0 272,304 - QEN71_RS41030 0.68 +0.3 272,304 - QEN71_RS41030 0.68 +0.4 272,304 - QEN71_RS41030 0.68 -0.0 272,365 - QEN71_RS41030 0.86 -0.3 272,388 + -0.8 272,389 - +0.4 272,389 - -0.3 272,389 - -1.1 272,389 - +0.6 272,389 - +0.8 272,389 - +0.9 272,389 - -0.3 272,394 + -0.3 272,395 - -0.6 272,395 - -0.6 272,395 - -0.6 272,395 - +1.0 272,395 - +1.7 272,395 - +0.4 272,395 - -1.3 272,395 - +2.0 272,395 - -0.7 272,395 - -0.6 272,395 - +1.3 272,395 - -2.1 272,413 - -0.5 272,413 - -2.6 272,454 + +0.1 272,454 + +0.9 272,455 - -0.8 272,455 - -0.0 272,455 - -0.2 272,566 + -0.3 272,566 + -0.1 272,566 + +0.2 272,566 + +1.2 272,566 + -1.6 272,567 - +0.7 272,567 - -0.5 272,611 + -0.0 272,612 - -0.8 272,637 + +0.1 272,638 - -0.1 272,638 - +0.8 272,664 + -0.0 272,664 + -0.0 272,698 + +0.3 272,698 + -1.1 272,698 + -0.8 272,698 + +0.5 272,698 + -0.7 272,698 + -0.3 272,698 + -0.9 272,698 + +0.0 272,698 + +0.1 272,698 + +0.5 272,698 + +0.1 272,698 + +1.0 272,698 + -2.2 272,698 + -0.0 272,699 - +2.0 272,699 - -0.3 272,699 - +0.9 272,739 - +1.4 272,878 + +0.0 272,981 + +0.5 272,981 + +0.0 272,981 + -0.6 273,030 + +1.2 273,031 - +0.1 273,080 + -0.0 273,080 + -0.8 273,080 + +0.2 273,080 + -1.2 273,080 + +0.4 273,081 - +0.2 273,081 - +0.6 273,081 - +0.9 273,081 - -0.5 273,081 - +0.3 273,082 + -0.1 273,082 + +0.3 273,082 + -0.7 273,082 + +2.4 273,082 + -0.1 273,082 + -0.6 273,082 + +1.0 273,082 + +1.5 273,082 + -0.0 273,082 + -0.0 273,082 + -0.0 273,082 + +2.0 273,082 + +0.5 273,082 + -0.4 273,082 + -0.0 273,083 - -0.6 273,083 - +0.4 273,083 - +0.3 273,083 - -2.3 273,083 - -0.3 273,083 - -0.4 273,083 - +0.8 273,083 - +1.0 273,083 - +0.5 273,083 - -0.5 273,083 - -0.5 273,083 - +0.1 273,083 - -0.2 273,083 - +2.3 273,083 - +1.0 273,083 - +1.0 273,152 + -0.5 273,152 + -1.4 273,152 + -1.2 273,152 + +0.8 273,152 + -0.1 273,152 + +1.6 273,152 + -0.6 273,152 + +0.8 273,152 + -0.4 273,152 + +1.1 273,152 + +0.9 273,152 + -0.5 273,152 + -0.6 273,153 - -0.1 273,153 - +0.1 273,153 - -0.4 273,153 - +0.1 273,153 - +1.2 273,153 - +0.1 273,153 - -0.6 273,153 - -0.8 273,153 - +0.1 273,153 - -0.8 273,153 - +0.3 273,153 - -0.5 273,243 + -0.8 273,243 + +0.1 273,243 + +0.3 273,243 + +0.4 273,243 + -0.2 273,243 + +1.1 273,243 + -0.0 273,243 + +0.7 273,243 + +1.1 273,244 - -0.3 273,244 - +0.2 273,244 - +1.0 273,244 - +0.6 273,244 - -0.0 273,244 - +0.8 273,244 - -1.9 273,244 - -0.3 273,244 - +0.2 273,244 - -0.3 273,244 - +0.9 273,244 - +0.1 273,244 - +0.3 273,244 - +0.4 273,244 - -0.5 273,244 - -0.6 273,244 - +0.3 273,245 + -0.8 273,245 + -0.2 273,246 - +0.7 273,246 - -0.2 273,246 - +0.2 273,266 + +0.1 273,267 - -0.5 273,291 + +2.1 273,291 + +0.6 273,292 - +0.2 273,292 - +1.3 273,292 - +0.7 273,295 + +0.6 273,295 + +1.6 273,295 + +0.3 273,295 + -0.1 273,295 + -0.3 273,295 + -0.5 273,295 + -0.0 273,295 + -1.8 273,295 + -1.3 273,295 + -1.0 273,295 + -0.2 273,295 + -0.3 273,296 - QEN71_RS41035 0.10 -0.6 273,296 - QEN71_RS41035 0.10 -1.1 273,296 - QEN71_RS41035 0.10 +1.0 273,296 - QEN71_RS41035 0.10 +0.1 273,296 - QEN71_RS41035 0.10 +0.1 273,296 - QEN71_RS41035 0.10 -1.2 273,296 - QEN71_RS41035 0.10 +0.1 273,296 - QEN71_RS41035 0.10 -0.1 273,296 - QEN71_RS41035 0.10 -0.2 273,296 - QEN71_RS41035 0.10 -0.7 273,378 + QEN71_RS41035 0.37 -0.4 273,378 + QEN71_RS41035 0.37 -0.2
Or see this region's nucleotide sequence