Experiment: LB_noSalt with Chloride 200 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS37475 and QEN71_RS37480 overlap by 4 nucleotides QEN71_RS37480 and QEN71_RS37485 overlap by 4 nucleotides
QEN71_RS37475: QEN71_RS37475 - c-type cytochrome, at 1,782,559 to 1,783,848
_RS37475
QEN71_RS37480: QEN71_RS37480 - (2Fe-2S)-binding protein, at 1,783,845 to 1,784,333
_RS37480
QEN71_RS37485: QEN71_RS37485 - molybdopterin-dependent oxidoreductase, at 1,784,330 to 1,786,600
_RS37485
Position (kb)
1783
1784
1785 Strain fitness (log2 ratio)
-2
-1
0
1 at 1782.934 kb on + strand, within QEN71_RS37475 at 1782.935 kb on - strand, within QEN71_RS37475 at 1782.937 kb on - strand, within QEN71_RS37475 at 1782.951 kb on + strand, within QEN71_RS37475 at 1782.951 kb on + strand, within QEN71_RS37475 at 1782.952 kb on - strand, within QEN71_RS37475 at 1782.952 kb on - strand, within QEN71_RS37475 at 1783.321 kb on + strand, within QEN71_RS37475 at 1783.321 kb on + strand, within QEN71_RS37475 at 1783.322 kb on - strand, within QEN71_RS37475 at 1783.322 kb on - strand, within QEN71_RS37475 at 1783.322 kb on - strand, within QEN71_RS37475 at 1783.322 kb on - strand, within QEN71_RS37475 at 1783.432 kb on + strand, within QEN71_RS37475 at 1783.432 kb on + strand, within QEN71_RS37475 at 1783.433 kb on - strand, within QEN71_RS37475 at 1783.433 kb on - strand, within QEN71_RS37475 at 1783.433 kb on - strand, within QEN71_RS37475 at 1783.702 kb on + strand, within QEN71_RS37475 at 1783.703 kb on - strand, within QEN71_RS37475 at 1783.703 kb on - strand, within QEN71_RS37475 at 1783.727 kb on - strand at 1783.759 kb on + strand at 1783.774 kb on + strand at 1783.911 kb on + strand, within QEN71_RS37480 at 1783.912 kb on - strand, within QEN71_RS37480 at 1784.256 kb on - strand, within QEN71_RS37480 at 1785.011 kb on + strand, within QEN71_RS37485 at 1785.011 kb on + strand, within QEN71_RS37485 at 1785.012 kb on - strand, within QEN71_RS37485 at 1785.138 kb on - strand, within QEN71_RS37485
Per-strain Table
Position Strand Gene LocusTag Fraction LB_noSalt with Chloride 200 mM remove 1,782,934 + QEN71_RS37475 0.29 +0.2 1,782,935 - QEN71_RS37475 0.29 -0.7 1,782,937 - QEN71_RS37475 0.29 -0.2 1,782,951 + QEN71_RS37475 0.30 -1.7 1,782,951 + QEN71_RS37475 0.30 -0.2 1,782,952 - QEN71_RS37475 0.30 -1.3 1,782,952 - QEN71_RS37475 0.30 -1.0 1,783,321 + QEN71_RS37475 0.59 -1.1 1,783,321 + QEN71_RS37475 0.59 -1.2 1,783,322 - QEN71_RS37475 0.59 -0.2 1,783,322 - QEN71_RS37475 0.59 -1.0 1,783,322 - QEN71_RS37475 0.59 +1.2 1,783,322 - QEN71_RS37475 0.59 -0.2 1,783,432 + QEN71_RS37475 0.68 -0.8 1,783,432 + QEN71_RS37475 0.68 -0.6 1,783,433 - QEN71_RS37475 0.68 -2.5 1,783,433 - QEN71_RS37475 0.68 -0.2 1,783,433 - QEN71_RS37475 0.68 -0.1 1,783,702 + QEN71_RS37475 0.89 -0.9 1,783,703 - QEN71_RS37475 0.89 -0.6 1,783,703 - QEN71_RS37475 0.89 -0.3 1,783,727 - -1.5 1,783,759 + -0.2 1,783,774 + -2.3 1,783,911 + QEN71_RS37480 0.13 -0.2 1,783,912 - QEN71_RS37480 0.14 -0.4 1,784,256 - QEN71_RS37480 0.84 -1.2 1,785,011 + QEN71_RS37485 0.30 -0.5 1,785,011 + QEN71_RS37485 0.30 -0.1 1,785,012 - QEN71_RS37485 0.30 -1.0 1,785,138 - QEN71_RS37485 0.36 -1.3
Or see this region's nucleotide sequence