Experiment: LB_noSalt with Chloride 200 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS33040 and QEN71_RS33045 are separated by 36 nucleotides QEN71_RS33045 and QEN71_RS33050 are separated by 19 nucleotides
QEN71_RS33040: QEN71_RS33040 - ornithine carbamoyltransferase, at 742,752 to 743,762
_RS33040
QEN71_RS33045: QEN71_RS33045 - carbamate kinase, at 743,799 to 744,737
_RS33045
QEN71_RS33050: QEN71_RS33050 - BamA/TamA family outer membrane protein, at 744,757 to 745,908
_RS33050
Position (kb) 743
744
745 Strain fitness (log2 ratio) -2
-1
0
1 at 742.858 kb on - strand, within QEN71_RS33040 at 742.980 kb on + strand, within QEN71_RS33040 at 742.980 kb on + strand, within QEN71_RS33040 at 742.980 kb on + strand, within QEN71_RS33040 at 742.981 kb on - strand, within QEN71_RS33040 at 742.981 kb on - strand, within QEN71_RS33040 at 742.981 kb on - strand, within QEN71_RS33040 at 743.113 kb on - strand, within QEN71_RS33040 at 743.127 kb on - strand, within QEN71_RS33040 at 743.152 kb on - strand, within QEN71_RS33040 at 743.683 kb on - strand at 743.683 kb on - strand at 744.250 kb on - strand, within QEN71_RS33045 at 744.492 kb on + strand, within QEN71_RS33045 at 744.723 kb on + strand at 744.724 kb on - strand at 744.724 kb on - strand at 745.078 kb on + strand, within QEN71_RS33050 at 745.079 kb on - strand, within QEN71_RS33050 at 745.218 kb on + strand, within QEN71_RS33050 at 745.403 kb on - strand, within QEN71_RS33050 at 745.499 kb on - strand, within QEN71_RS33050 at 745.524 kb on + strand, within QEN71_RS33050 at 745.524 kb on + strand, within QEN71_RS33050 at 745.524 kb on + strand, within QEN71_RS33050 at 745.524 kb on + strand, within QEN71_RS33050 at 745.525 kb on - strand, within QEN71_RS33050 at 745.604 kb on - strand, within QEN71_RS33050 at 745.616 kb on - strand, within QEN71_RS33050
Per-strain Table
Position Strand Gene LocusTag Fraction LB_noSalt with Chloride 200 mM remove 742,858 - QEN71_RS33040 0.10 -1.5 742,980 + QEN71_RS33040 0.23 -0.9 742,980 + QEN71_RS33040 0.23 -0.6 742,980 + QEN71_RS33040 0.23 +0.2 742,981 - QEN71_RS33040 0.23 +0.6 742,981 - QEN71_RS33040 0.23 -0.6 742,981 - QEN71_RS33040 0.23 +0.3 743,113 - QEN71_RS33040 0.36 -0.6 743,127 - QEN71_RS33040 0.37 -0.6 743,152 - QEN71_RS33040 0.40 -0.4 743,683 - +0.6 743,683 - +1.0 744,250 - QEN71_RS33045 0.48 -1.4 744,492 + QEN71_RS33045 0.74 -2.2 744,723 + -0.6 744,724 - +0.3 744,724 - +1.4 745,078 + QEN71_RS33050 0.28 -0.2 745,079 - QEN71_RS33050 0.28 +0.2 745,218 + QEN71_RS33050 0.40 -0.4 745,403 - QEN71_RS33050 0.56 -1.1 745,499 - QEN71_RS33050 0.64 -0.6 745,524 + QEN71_RS33050 0.67 +0.0 745,524 + QEN71_RS33050 0.67 +0.0 745,524 + QEN71_RS33050 0.67 +1.5 745,524 + QEN71_RS33050 0.67 -0.6 745,525 - QEN71_RS33050 0.67 -0.7 745,604 - QEN71_RS33050 0.74 -0.1 745,616 - QEN71_RS33050 0.75 +0.4
Or see this region's nucleotide sequence