Experiment: LB_noSalt with Chloride 200 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS23400 and QEN71_RS23405 are separated by 20 nucleotides QEN71_RS23405 and QEN71_RS23410 are separated by 112 nucleotides
QEN71_RS23400: QEN71_RS23400 - class I SAM-dependent methyltransferase, at 5,212,160 to 5,212,768
_RS23400
QEN71_RS23405: QEN71_RS23405 - patatin-like phospholipase family protein, at 5,212,789 to 5,213,817
_RS23405
QEN71_RS23410: QEN71_RS23410 - hypothetical protein, at 5,213,930 to 5,214,472
_RS23410
Position (kb) 5212
5213
5214 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 5211.791 kb on + strand at 5211.858 kb on + strand at 5211.858 kb on + strand at 5211.859 kb on - strand at 5211.923 kb on + strand at 5211.923 kb on + strand at 5211.923 kb on + strand at 5212.107 kb on + strand at 5212.107 kb on + strand at 5212.108 kb on - strand at 5212.196 kb on + strand at 5212.196 kb on + strand at 5212.197 kb on - strand at 5212.259 kb on + strand, within QEN71_RS23400 at 5212.259 kb on + strand, within QEN71_RS23400 at 5212.259 kb on + strand, within QEN71_RS23400 at 5212.259 kb on + strand, within QEN71_RS23400 at 5212.259 kb on + strand, within QEN71_RS23400 at 5212.259 kb on + strand, within QEN71_RS23400 at 5212.260 kb on - strand, within QEN71_RS23400 at 5212.260 kb on - strand, within QEN71_RS23400 at 5212.260 kb on - strand, within QEN71_RS23400 at 5212.260 kb on - strand, within QEN71_RS23400 at 5212.260 kb on - strand, within QEN71_RS23400 at 5212.260 kb on - strand, within QEN71_RS23400 at 5212.260 kb on - strand, within QEN71_RS23400 at 5212.260 kb on - strand, within QEN71_RS23400 at 5212.260 kb on - strand, within QEN71_RS23400 at 5212.260 kb on - strand, within QEN71_RS23400 at 5212.260 kb on - strand, within QEN71_RS23400 at 5212.260 kb on - strand, within QEN71_RS23400 at 5212.577 kb on + strand, within QEN71_RS23400 at 5212.577 kb on + strand, within QEN71_RS23400 at 5212.577 kb on + strand, within QEN71_RS23400 at 5212.577 kb on + strand, within QEN71_RS23400 at 5212.577 kb on + strand, within QEN71_RS23400 at 5212.577 kb on + strand, within QEN71_RS23400 at 5212.577 kb on + strand, within QEN71_RS23400 at 5212.577 kb on + strand, within QEN71_RS23400 at 5212.578 kb on - strand, within QEN71_RS23400 at 5212.578 kb on - strand, within QEN71_RS23400 at 5212.578 kb on - strand, within QEN71_RS23400 at 5212.578 kb on - strand, within QEN71_RS23400 at 5212.578 kb on - strand, within QEN71_RS23400 at 5212.578 kb on - strand, within QEN71_RS23400 at 5212.578 kb on - strand, within QEN71_RS23400 at 5212.578 kb on - strand, within QEN71_RS23400 at 5212.578 kb on - strand, within QEN71_RS23400 at 5212.578 kb on - strand, within QEN71_RS23400 at 5212.578 kb on - strand, within QEN71_RS23400 at 5212.578 kb on - strand, within QEN71_RS23400 at 5212.578 kb on - strand, within QEN71_RS23400 at 5212.634 kb on + strand, within QEN71_RS23400 at 5212.757 kb on - strand at 5212.757 kb on - strand at 5213.372 kb on - strand, within QEN71_RS23405 at 5213.372 kb on - strand, within QEN71_RS23405 at 5213.809 kb on + strand at 5213.809 kb on + strand at 5213.809 kb on + strand at 5213.834 kb on + strand at 5213.835 kb on - strand at 5213.838 kb on + strand at 5213.849 kb on + strand at 5213.849 kb on + strand at 5213.850 kb on - strand at 5213.881 kb on + strand at 5213.881 kb on + strand at 5213.882 kb on - strand at 5213.882 kb on - strand at 5213.967 kb on + strand at 5213.967 kb on + strand at 5213.967 kb on + strand at 5213.967 kb on + strand at 5213.968 kb on - strand at 5214.210 kb on + strand, within QEN71_RS23410 at 5214.210 kb on + strand, within QEN71_RS23410 at 5214.210 kb on + strand, within QEN71_RS23410 at 5214.210 kb on + strand, within QEN71_RS23410 at 5214.210 kb on + strand, within QEN71_RS23410 at 5214.210 kb on + strand, within QEN71_RS23410 at 5214.210 kb on + strand, within QEN71_RS23410 at 5214.210 kb on + strand, within QEN71_RS23410 at 5214.211 kb on - strand, within QEN71_RS23410 at 5214.211 kb on - strand, within QEN71_RS23410 at 5214.211 kb on - strand, within QEN71_RS23410 at 5214.211 kb on - strand, within QEN71_RS23410 at 5214.211 kb on - strand, within QEN71_RS23410 at 5214.211 kb on - strand, within QEN71_RS23410 at 5214.211 kb on - strand, within QEN71_RS23410 at 5214.211 kb on - strand, within QEN71_RS23410 at 5214.494 kb on - strand at 5214.525 kb on + strand at 5214.526 kb on + strand at 5214.526 kb on + strand at 5214.526 kb on + strand at 5214.526 kb on + strand at 5214.526 kb on + strand at 5214.526 kb on + strand at 5214.526 kb on + strand at 5214.527 kb on - strand at 5214.527 kb on - strand at 5214.527 kb on - strand at 5214.527 kb on - strand at 5214.544 kb on + strand at 5214.600 kb on + strand at 5214.612 kb on - strand at 5214.753 kb on + strand at 5214.753 kb on + strand at 5214.753 kb on + strand at 5214.754 kb on - strand at 5214.754 kb on - strand at 5214.754 kb on - strand at 5214.754 kb on - strand at 5214.754 kb on - strand at 5214.788 kb on + strand at 5214.788 kb on + strand at 5214.789 kb on - strand at 5214.810 kb on + strand at 5214.810 kb on + strand at 5214.810 kb on + strand at 5214.810 kb on + strand at 5214.811 kb on - strand at 5214.811 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB_noSalt with Chloride 200 mM remove 5,211,791 + -1.3 5,211,858 + -0.1 5,211,858 + +0.3 5,211,859 - +0.8 5,211,923 + -0.3 5,211,923 + +1.0 5,211,923 + -0.3 5,212,107 + +1.6 5,212,107 + +0.2 5,212,108 - -1.3 5,212,196 + +1.5 5,212,196 + -0.8 5,212,197 - -0.3 5,212,259 + QEN71_RS23400 0.16 -0.1 5,212,259 + QEN71_RS23400 0.16 +0.0 5,212,259 + QEN71_RS23400 0.16 -0.7 5,212,259 + QEN71_RS23400 0.16 -0.6 5,212,259 + QEN71_RS23400 0.16 +0.0 5,212,259 + QEN71_RS23400 0.16 +2.4 5,212,260 - QEN71_RS23400 0.16 -0.7 5,212,260 - QEN71_RS23400 0.16 -0.6 5,212,260 - QEN71_RS23400 0.16 -0.8 5,212,260 - QEN71_RS23400 0.16 -0.1 5,212,260 - QEN71_RS23400 0.16 +1.3 5,212,260 - QEN71_RS23400 0.16 +0.2 5,212,260 - QEN71_RS23400 0.16 -0.5 5,212,260 - QEN71_RS23400 0.16 -0.7 5,212,260 - QEN71_RS23400 0.16 -1.8 5,212,260 - QEN71_RS23400 0.16 +1.0 5,212,260 - QEN71_RS23400 0.16 -0.1 5,212,260 - QEN71_RS23400 0.16 -0.7 5,212,577 + QEN71_RS23400 0.68 +0.1 5,212,577 + QEN71_RS23400 0.68 -0.8 5,212,577 + QEN71_RS23400 0.68 -0.9 5,212,577 + QEN71_RS23400 0.68 -1.6 5,212,577 + QEN71_RS23400 0.68 -0.8 5,212,577 + QEN71_RS23400 0.68 -0.4 5,212,577 + QEN71_RS23400 0.68 -0.3 5,212,577 + QEN71_RS23400 0.68 -0.8 5,212,578 - QEN71_RS23400 0.69 -0.8 5,212,578 - QEN71_RS23400 0.69 -0.4 5,212,578 - QEN71_RS23400 0.69 +0.3 5,212,578 - QEN71_RS23400 0.69 -0.1 5,212,578 - QEN71_RS23400 0.69 +0.6 5,212,578 - QEN71_RS23400 0.69 +0.0 5,212,578 - QEN71_RS23400 0.69 -1.2 5,212,578 - QEN71_RS23400 0.69 -0.6 5,212,578 - QEN71_RS23400 0.69 +0.5 5,212,578 - QEN71_RS23400 0.69 +0.0 5,212,578 - QEN71_RS23400 0.69 +0.6 5,212,578 - QEN71_RS23400 0.69 -0.6 5,212,578 - QEN71_RS23400 0.69 +0.6 5,212,634 + QEN71_RS23400 0.78 +2.4 5,212,757 - -0.2 5,212,757 - -0.4 5,213,372 - QEN71_RS23405 0.57 -2.3 5,213,372 - QEN71_RS23405 0.57 -0.9 5,213,809 + -0.2 5,213,809 + +0.3 5,213,809 + +1.0 5,213,834 + -0.6 5,213,835 - -0.6 5,213,838 + -0.8 5,213,849 + -0.4 5,213,849 + +0.6 5,213,850 - -0.3 5,213,881 + +0.6 5,213,881 + +0.3 5,213,882 - -0.4 5,213,882 - -0.3 5,213,967 + +0.0 5,213,967 + -0.1 5,213,967 + +0.3 5,213,967 + +0.1 5,213,968 - -2.2 5,214,210 + QEN71_RS23410 0.52 -0.5 5,214,210 + QEN71_RS23410 0.52 -0.3 5,214,210 + QEN71_RS23410 0.52 +0.3 5,214,210 + QEN71_RS23410 0.52 +0.2 5,214,210 + QEN71_RS23410 0.52 +0.5 5,214,210 + QEN71_RS23410 0.52 -1.7 5,214,210 + QEN71_RS23410 0.52 +0.1 5,214,210 + QEN71_RS23410 0.52 +0.7 5,214,211 - QEN71_RS23410 0.52 +0.3 5,214,211 - QEN71_RS23410 0.52 -0.2 5,214,211 - QEN71_RS23410 0.52 -1.1 5,214,211 - QEN71_RS23410 0.52 +0.4 5,214,211 - QEN71_RS23410 0.52 -0.7 5,214,211 - QEN71_RS23410 0.52 -0.5 5,214,211 - QEN71_RS23410 0.52 -1.1 5,214,211 - QEN71_RS23410 0.52 -0.2 5,214,494 - +1.2 5,214,525 + -0.9 5,214,526 + -0.5 5,214,526 + +0.1 5,214,526 + -0.1 5,214,526 + +1.6 5,214,526 + -0.3 5,214,526 + -0.4 5,214,526 + -0.4 5,214,527 - -0.1 5,214,527 - -1.1 5,214,527 - +0.7 5,214,527 - +0.5 5,214,544 + +2.9 5,214,600 + -0.9 5,214,612 - -0.6 5,214,753 + +0.4 5,214,753 + -0.9 5,214,753 + -0.1 5,214,754 - -0.1 5,214,754 - -0.2 5,214,754 - +0.1 5,214,754 - -0.3 5,214,754 - -1.0 5,214,788 + +0.6 5,214,788 + +1.0 5,214,789 - -0.5 5,214,810 + +0.4 5,214,810 + +0.9 5,214,810 + -1.4 5,214,810 + -1.2 5,214,811 - -1.8 5,214,811 - +0.0
Or see this region's nucleotide sequence