Experiment: LB_noSalt with Chloride 200 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS20980 and QEN71_RS20985 are separated by 174 nucleotides QEN71_RS20985 and QEN71_RS20990 are separated by 130 nucleotides QEN71_RS20990 and QEN71_RS20995 are separated by 16 nucleotides QEN71_RS20995 and QEN71_RS21000 are separated by 130 nucleotides
QEN71_RS20980: QEN71_RS20980 - CHAP domain-containing protein, at 4,651,452 to 4,651,823
_RS20980
QEN71_RS20985: QEN71_RS20985 - energy transducer TonB, at 4,651,998 to 4,652,366
_RS20985
QEN71_RS20990: QEN71_RS20990 - quinone oxidoreductase, at 4,652,497 to 4,653,465
_RS20990
QEN71_RS20995: QEN71_RS20995 - alpha/beta hydrolase, at 4,653,482 to 4,654,225
_RS20995
QEN71_RS21000: QEN71_RS21000 - DUF4148 domain-containing protein, at 4,654,356 to 4,654,685
_RS21000
Position (kb) 4652
4653
4654 Strain fitness (log2 ratio) -1
0
1 at 4651.510 kb on + strand, within QEN71_RS20980 at 4652.096 kb on + strand, within QEN71_RS20985 at 4652.103 kb on + strand, within QEN71_RS20985 at 4652.103 kb on + strand, within QEN71_RS20985 at 4652.181 kb on - strand, within QEN71_RS20985 at 4652.247 kb on + strand, within QEN71_RS20985 at 4652.328 kb on - strand, within QEN71_RS20985 at 4652.651 kb on - strand, within QEN71_RS20990 at 4652.757 kb on - strand, within QEN71_RS20990 at 4652.829 kb on - strand, within QEN71_RS20990 at 4653.186 kb on - strand, within QEN71_RS20990 at 4653.201 kb on - strand, within QEN71_RS20990 at 4653.201 kb on - strand, within QEN71_RS20990 at 4653.652 kb on - strand, within QEN71_RS20995 at 4653.909 kb on + strand, within QEN71_RS20995 at 4653.909 kb on + strand, within QEN71_RS20995 at 4653.910 kb on - strand, within QEN71_RS20995 at 4654.278 kb on - strand at 4654.369 kb on + strand at 4654.370 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB_noSalt with Chloride 200 mM remove 4,651,510 + QEN71_RS20980 0.16 -0.6 4,652,096 + QEN71_RS20985 0.27 +1.5 4,652,103 + QEN71_RS20985 0.28 -0.7 4,652,103 + QEN71_RS20985 0.28 +0.1 4,652,181 - QEN71_RS20985 0.50 -1.3 4,652,247 + QEN71_RS20985 0.67 +0.9 4,652,328 - QEN71_RS20985 0.89 -0.9 4,652,651 - QEN71_RS20990 0.16 -0.7 4,652,757 - QEN71_RS20990 0.27 -1.3 4,652,829 - QEN71_RS20990 0.34 +0.1 4,653,186 - QEN71_RS20990 0.71 -1.0 4,653,201 - QEN71_RS20990 0.73 -1.2 4,653,201 - QEN71_RS20990 0.73 -0.7 4,653,652 - QEN71_RS20995 0.23 +0.0 4,653,909 + QEN71_RS20995 0.57 -0.4 4,653,909 + QEN71_RS20995 0.57 -0.0 4,653,910 - QEN71_RS20995 0.58 +0.2 4,654,278 - -0.1 4,654,369 + +0.8 4,654,370 - +0.2
Or see this region's nucleotide sequence